Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p00830 Brassica napus
A02p06210 Brassica napus
A03p04870 Brassica napus
A03p10070 Brassica napus
A06p36000 Brassica napus
A09p06220 Brassica napus
A10p26610 Brassica napus
Aa31LG11G4470 Aethionema arabicum
Aa31LG3G16060 Aethionema arabicum
Aa31sc74G30 Aethionema arabicum
Actinidia04235 Actinidia chinensis
Actinidia18225 Actinidia chinensis
Actinidia21922 Actinidia chinensis
Actinidia23078 Actinidia chinensis
Ah.01g006640 Amaranthus hybridus
Ah.01g020280 Amaranthus hybridus
Ah.02g122340 Amaranthus hybridus
Ah.09g224070 Amaranthus hybridus
AL6G21720 Arabidopsis lyrata
AL6G31930 Arabidopsis lyrata
AL6G36970 Arabidopsis lyrata
Aqoxy7G02459 Aquilegia oxysepala
Aqoxy7G03581 Aquilegia oxysepala
Aqoxy7G04008 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.03Q5EX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F94VN9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J3NPFC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P1SNYQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y6JXG3 Arachis hypogaea
AT5G11090 Arabidopsis thaliana
AT5G20370 Arabidopsis thaliana
AT5G25280 Arabidopsis thaliana
ATR0767G185 Amborella trichopoda
ATR0767G220 Amborella trichopoda
ATR0980G013 Amborella trichopoda
Atru.chr7.2485 Acer truncatum
Atru.chr7.288 Acer truncatum
Atru.chr7.291 Acer truncatum
AUR62011232 Chenopodium quinoa
AUR62011463 Chenopodium quinoa
AUR62012437 Chenopodium quinoa
AUR62016592 Chenopodium quinoa
AUR62020001 Chenopodium quinoa
AUR62031561 Chenopodium quinoa
BcaB01g06318 Brassica carinata
BcaB01g06319 Brassica carinata
BcaB04g19794 Brassica carinata
BcaB05g22850 Brassica carinata
BcaB06g26618 Brassica carinata
BcaC03g13349 Brassica carinata
BcaC03g13759 Brassica carinata
BcaC04g19260 Brassica carinata
BcaC04g23580 Brassica carinata
BcaNung01910 Brassica carinata
BcaNung02280 Brassica carinata
BcaNung03211 Brassica carinata
BcaNung04975 Brassica carinata
BcaNung05611 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01630 Brassica napus
BolC2t06443H Brassica oleracea
BolC2t07038H Brassica oleracea
BolC3t13070H Brassica oleracea
BolC3t13631H Brassica oleracea
BolC7t44784H Brassica oleracea
BolC9t53607H Brassica oleracea
BolC9t59398H Brassica oleracea
BraA02t05066Z Brassica rapa
BraA02t05570Z Brassica rapa
BraA03t09826Z Brassica rapa
BraA03t10318Z Brassica rapa
BraA06t26524Z Brassica rapa
BraA09t36266Z Brassica rapa
BraA10t44718Z Brassica rapa
C02p04850 Brassica napus
C03p05600 Brassica napus
C03p11590 Brassica napus
C07p42550 Brassica napus
C09p06870 Brassica napus
C09p65760 Brassica napus
CAN.G1475.1 Capsicum annuum
CAN.G863.8 Capsicum annuum
CANSAT11G1454 Cannabis sativa
CANSAT25G1445 Cannabis sativa
CANSAT56G0818 Cannabis sativa
CARHR188200 Cardamine hirsuta
CARHR192470 Cardamine hirsuta
CARHR202210 Cardamine hirsuta
Carub.0006s0959 Capsella rubella
Carub.0006s1876 Capsella rubella
Carub.0006s2310 Capsella rubella
Ca_01041_v3 Cicer arietinum L.
Ca_03070_v3 Cicer arietinum L.
Ca_13039_v3 Cicer arietinum L.
Ca_15757_v3 Cicer arietinum L.
Ca_20626_v3 Cicer arietinum L.
Ca_21632_v3 Cicer arietinum L.
Ca_30355_v3 Cicer arietinum L.
Ca_30432_v3 Cicer arietinum L.
Ca_30868_v3 Cicer arietinum L.
Cc04_g04740 Coffea canephora
Cc06_g07590 Coffea canephora
Cc06_g20700 Coffea canephora
Cc08_g00300 Coffea canephora
CDE02G0391 Ceratophyllum demersum
CDE02G1237 Ceratophyllum demersum
CDE05G0287 Ceratophyllum demersum
CDE05G1702 Ceratophyllum demersum
Cfa002254 Carpinus fangiana
Cfa013115 Carpinus fangiana
Cfa020909 Carpinus fangiana
Ciclev10009513m.g Citrus clementina
Ciclev10027309m.g Citrus clementina
Ciclev10027369m.g Citrus clementina
CiPaw.01G251100 Carya illinoinensis
CiPaw.02G159200 Carya illinoinensis
CiPaw.03G252800 Carya illinoinensis
CiPaw.04G178000 Carya illinoinensis
CiPaw.07G226200 Carya illinoinensis
CiPaw.08G009000 Carya illinoinensis
CiPaw.15G184100 Carya illinoinensis
ClCG02G017160 Citrullus lanatus
ClCG05G016650 Citrullus lanatus
ClCG06G011900 Citrullus lanatus
ClCG06G011910 Citrullus lanatus
ClCG07G012320 Citrullus lanatus
ClCG08G013480 Citrullus lanatus
COL.COLO4_11838 Corchorus olitorius
COL.COLO4_11841 Corchorus olitorius
COL.COLO4_11848 Corchorus olitorius
COL.COLO4_24143 Corchorus olitorius
COL.COLO4_26722 Corchorus olitorius
COL.COLO4_26726 Corchorus olitorius
Cpa.g.sc1218.1 Carica papaya
Cpa.g.sc187.15 Carica papaya
CsaV3_1G028370 Cucumis sativus L.
CsaV3_1G028380 Cucumis sativus L.
CsaV3_2G003620 Cucumis sativus L.
CsaV3_2G032230 Cucumis sativus L.
CsaV3_4G001820 Cucumis sativus L.
CsaV3_4G036960 Cucumis sativus L.
CsaV3_7G032120 Cucumis sativus L.
CSS0008624 Camellia sinensis var. sinensis
CSS0015369 Camellia sinensis var. sinensis
CSS0019165 Camellia sinensis var. sinensis
CSS0036721 Camellia sinensis var. sinensis
CSS0039462 Camellia sinensis var. sinensis
CSS0040814 Camellia sinensis var. sinensis
DCAR_009348 Daucus carota
DCAR_014919 Daucus carota
DCAR_017769 Daucus carota
DCAR_020900 Daucus carota
DCAR_025532 Daucus carota
Dinv15875 Davidia involucrata
Dinv18184 Davidia involucrata
Dinv21476 Davidia involucrata
Dinv23322 Davidia involucrata
Dinv30640 Davidia involucrata
Dinv38148 Davidia involucrata
Dinv41438 Davidia involucrata
Dinv42928 Davidia involucrata
Dinv43172 Davidia involucrata
Duzib150G0264 Durio zibethinus
Duzib150G0676 Durio zibethinus
Duzib168G0092 Durio zibethinus
Duzib168G0369 Durio zibethinus
Duzib187G0507 Durio zibethinus
Duzib235G1415 Durio zibethinus
Duzib235G1521 Durio zibethinus
ECA232G1817 Erigeron canadensis
ECA233G5154 Erigeron canadensis
ECA234G3102 Erigeron canadensis
ECA246G3195 Erigeron canadensis
EL10Ac2g04163 Beta vulgaris
EL10Ac8g18793 Beta vulgaris
EL10Ac8g18794 Beta vulgaris
EL10Ac8g18795 Beta vulgaris
EL10Ac9g21857 Beta vulgaris
Eucgr.C00452 Eucalyptus grandis
Eucgr.C00453 Eucalyptus grandis
Eucgr.C01627 Eucalyptus grandis
Eucgr.C01705 Eucalyptus grandis
Eucgr.C02733 Eucalyptus grandis
Eucgr.J03089 Eucalyptus grandis
Eucgr.L01039 Eucalyptus grandis
FAN05G1633 Fragaria x ananassa
FAN09G2414 Fragaria x ananassa
FAN14G2126 Fragaria x ananassa
FAN14G4868 Fragaria x ananassa
FAN19G2322 Fragaria x ananassa
FAN19G2656 Fragaria x ananassa
FAN20G2065 Fragaria x ananassa
FAN23G1559 Fragaria x ananassa
FAN24G2155 Fragaria x ananassa
FAN27G3426 Fragaria x ananassa
FAN28G0842 Fragaria x ananassa
FvH4_1g01920 Fragaria vesca
FvH4_1g01930 Fragaria vesca
FvH4_6g29080 Fragaria vesca
FvH4_6g29090 Fragaria vesca
Glyma.04G064600 Glycine max
Glyma.06G065900 Glycine max
Glyma.09G092100 Glycine max
Glyma.09G092400 Glycine max
Glyma.13G164300 Glycine max
Glyma.13G164600 Glycine max
Glyma.14G113400 Glycine max
Glyma.15G005600 Glycine max
Glyma.15G198900 Glycine max
Glyma.17G106500 Glycine max
Glyma.17G106600 Glycine max
Glyma.17G213700 Glycine max
Gohir.A02G112709 Gossypium hirsutum
Gohir.A05G012500 Gossypium hirsutum
Gohir.A05G012600 Gossypium hirsutum
Gohir.A05G121500 Gossypium hirsutum
Gohir.A06G051500 Gossypium hirsutum
Gohir.A08G091400 Gossypium hirsutum
Gohir.A08G091600 Gossypium hirsutum
Gohir.D05G013600 Gossypium hirsutum
Gohir.D05G013700 Gossypium hirsutum
Gohir.D05G122500 Gossypium hirsutum
Gohir.D06G050650 Gossypium hirsutum
Gohir.D06G050700 Gossypium hirsutum
Gohir.D08G102001 Gossypium hirsutum
Gohir.D08G102100 Gossypium hirsutum
Gohir.D08G258233 Gossypium hirsutum
Gorai.004G110000 Gossypium raimondii
Gorai.004G110100 Gossypium raimondii
Gorai.004G275400 Gossypium raimondii
Gorai.009G013600 Gossypium raimondii
Gorai.009G013700 Gossypium raimondii
Gorai.009G126000 Gossypium raimondii
Gorai.010G057500 Gossypium raimondii
Gorai.010G057600 Gossypium raimondii
GSVIVG01012865001 Vitis vinifera
HanXRQChr02g0050311 Helianthus annuus
HanXRQChr04g0098291 Helianthus annuus
HanXRQChr09g0241891 Helianthus annuus
HanXRQChr10g0314131 Helianthus annuus
HanXRQChr12g0357111 Helianthus annuus
HanXRQChr13g0403201 Helianthus annuus
Haze_16612 Corylus avellana
Haze_16621 Corylus avellana
Haze_19340 Corylus avellana
Haze_21477 Corylus avellana
Hma1.2p1_0109F.1_g052230 Hydrangea macrophylla
Hma1.2p1_0182F.1_g080340 Hydrangea macrophylla
Hma1.2p1_0228F.1_g096480 Hydrangea macrophylla
Hma1.2p1_0949F.1_g240680 Hydrangea macrophylla
Hma1.2p1_1388F.1_g279920 Hydrangea macrophylla
Hma1.2p1_2559F.1_g324390 Hydrangea macrophylla
Lalb_Chr08g0244251 Lupinus albus
Lalb_Chr11g0063621 Lupinus albus
Lalb_Chr11g0073071 Lupinus albus
Lalb_Chr12g0198441 Lupinus albus
Lalb_Chr12g0198451 Lupinus albus
Lalb_Chr22g0350761 Lupinus albus
Lalb_Chr24g0395391 Lupinus albus
Lj1g0018553 Lotus japonicus
Lj3g0008933 Lotus japonicus
Lj4g0013960 Lotus japonicus
Lj4g0021441 Lotus japonicus
Lj5C77T0 Lonicera japonica
Lj5g0006621 Lotus japonicus
Lj6g0000195 Lotus japonicus
Lj7P439T19 Lonicera japonica
Lj7P727T13 Lonicera japonica
Lj9P704T68 Lonicera japonica
Lsat_1_v5_gn_1_31180 Lactuca sativa
Lsat_1_v5_gn_4_87940 Lactuca sativa
Lsat_1_v5_gn_4_88081 Lactuca sativa
Lsat_1_v5_gn_5_7940 Lactuca sativa
Lsat_1_v5_gn_5_92181 Lactuca sativa
Lsat_1_v5_gn_5_92321 Lactuca sativa
Lsat_1_v5_gn_6_115580 Lactuca sativa
Lsat_1_v5_gn_6_20381 Lactuca sativa
Lsat_1_v5_gn_7_46921 Lactuca sativa
Manes.03G012500 Manihot esculenta
Manes.04G107300 Manihot esculenta
Manes.04G108000 Manihot esculenta
Manes.06G043000 Manihot esculenta
Manes.06G043600 Manihot esculenta
Manes.11G061800 Manihot esculenta
Manes.14G120800 Manihot esculenta
Manes.14G120900 Manihot esculenta
Manes.16G125300 Manihot esculenta
MBI15_g04675_MAGBIO Magnolia biondii
MBI15_g22213_MAGBIO Magnolia biondii
MBI15_g22214_MAGBIO Magnolia biondii
MBI15_g41677_MAGBIO Magnolia biondii
MBI15_g42061_MAGBIO Magnolia biondii
MD00G1046800 Malus domestica
MD08G1152900 Malus domestica
MD13G1239000 Malus domestica
MD15G1129600 Malus domestica
MD15G1161800 Malus domestica
MD17G1218000 Malus domestica
Medtr2g104380 Medicago truncatula
Medtr2g450700 Medicago truncatula
Medtr3g106530 Medicago truncatula
Medtr4g108340 Medicago truncatula
Medtr4g116277 Medicago truncatula
MELO3C004434.2 Cucumis melo
MELO3C010274.2 Cucumis melo
MELO3C010275.2 Cucumis melo
MELO3C011275.2 Cucumis melo
MELO3C016995.2 Cucumis melo
MELO3C017851.2 Cucumis melo
MELO3C023447.2 Cucumis melo
Migut.A00013 Erythranthe guttata
Migut.E01816 Erythranthe guttata
Migut.I00734 Erythranthe guttata
Migut.J01253 Erythranthe guttata
Migut.J01254 Erythranthe guttata
Migut.K00394 Erythranthe guttata
Nitab4.5_0000550g0060 Nicotiana tabacum
Nitab4.5_0000550g0080 Nicotiana tabacum
Nitab4.5_0000857g0030 Nicotiana tabacum
Nitab4.5_0002322g0130 Nicotiana tabacum
Nitab4.5_0002329g0150 Nicotiana tabacum
Nitab4.5_0002329g0160 Nicotiana tabacum
Nitab4.5_0002503g0010 Nicotiana tabacum
Nitab4.5_0002845g0110 Nicotiana tabacum
Nitab4.5_0006513g0010 Nicotiana tabacum
Nitab4.5_0006648g0020 Nicotiana tabacum
Nitab4.5_0006908g0010 Nicotiana tabacum
Nitab4.5_0008310g0070 Nicotiana tabacum
Nitab4.5_0009917g0010 Nicotiana tabacum
Nn2g12214 Nelumbo nucifera
Nn8g39672 Nelumbo nucifera
Nn8g39673 Nelumbo nucifera
Oeu027835.1 Olea europaea
Oeu042120.1 Olea europaea
Oeu053102.1 Olea europaea
Oeu060122.1 Olea europaea
Os02g0799600 Oryza sativa ssp. japonica
Os02g0799700 Oryza sativa ssp. japonica
Os08g0167249 Oryza sativa ssp. japonica
Peaxi162Scf00088g00035 Petunia axillaris
Peaxi162Scf00088g00042 Petunia axillaris
Peaxi162Scf00116g00113 Petunia axillaris
Peaxi162Scf00332g00227 Petunia axillaris
Peaxi162Scf00430g00019 Petunia axillaris
Peaxi162Scf01694g00015 Petunia axillaris
PGR031G2784 Punica granatum
PGR044G2741 Punica granatum
PGR102G2453 Punica granatum
PGR142G0533 Punica granatum
PGSC0003DMG400007835 Solanum tuberosum
PGSC0003DMG400026100 Solanum tuberosum
PGSC0003DMG400028501 Solanum tuberosum
PGSC0003DMG400030726 Solanum tuberosum
PGSC0003DMG400030747 Solanum tuberosum
PGSC0003DMG400046334 Solanum tuberosum
Phvul.001G049400 Phaseolus vulgaris
Phvul.003G173100 Phaseolus vulgaris
Phvul.005G179600 Phaseolus vulgaris
Phvul.009G090900 Phaseolus vulgaris
Phvul.009G211600 Phaseolus vulgaris
Phvul.009G211700 Phaseolus vulgaris
Potri.006G060700 Populus trichocarpa
Potri.006G060800 Populus trichocarpa
Potri.006G258600 Populus trichocarpa
Potri.018G023300 Populus trichocarpa
Potri.018G120300 Populus trichocarpa
Potri.018G120400 Populus trichocarpa
Prupe.1G485100 Prunus persica
Prupe.3G093600 Prunus persica
Prupe.3G093700 Prunus persica
Prupe.7G256800 Prunus persica
Prupe.7G256900 Prunus persica
Psat0s1919g0040 Pisum sativum
Psat0s1919g0080 Pisum sativum
Psat4g034480 Pisum sativum
Psat5g031600 Pisum sativum
Psat5g303760 Pisum sativum
Psat6g028200 Pisum sativum
PSO017G0518 Papaver somniferum
PSO017G5196 Papaver somniferum
PSO170G2380 Papaver somniferum
PSO170G4687 Papaver somniferum
QL02p020808 Quercus lobata
QL02p090909 Quercus lobata
QL05p032829 Quercus lobata
QL05p033188 Quercus lobata
RcHm_v2.0_Chr1g0364551 Rosa chinensis
RcHm_v2.0_Chr2g0086941 Rosa chinensis
RcHm_v2.0_Chr2g0086961 Rosa chinensis
RcHm_v2.0_Chr2g0134261 Rosa chinensis
RcHm_v2.0_Chr2g0134271 Rosa chinensis
RcHm_v2.0_Chr5g0049471 Rosa chinensis
RcHm_v2.0_Chr6g0297351 Rosa chinensis
Rhsim01G0050800 Rhododendron simsii
Rhsim01G0050900 Rhododendron simsii
Rhsim03G0255400 Rhododendron simsii
Rhsim07G0161300 Rhododendron simsii
Rhsim08G0209700 Rhododendron simsii
Rhsim08G0209800 Rhododendron simsii
Sabra06G0043700 Salix brachista
Sabra06G0202100 Salix brachista
Sabra18G0025700 Salix brachista
SalBow1G2900 Salvia bowleyana
SalBow1G8072 Salvia bowleyana
SalBow4G0128 Salvia bowleyana
SalBow7G4284 Salvia bowleyana
Sc08g0005950 Simmondsia chinensis
Sc08g0005980 Simmondsia chinensis
Sc09g0010340 Simmondsia chinensis
Sc18g0000110 Simmondsia chinensis
Sed0005428 Sechium edule
Sed0006914 Sechium edule
Sed0008227 Sechium edule
Sed0012206 Sechium edule
Sed0018594 Sechium edule
Sed0023735 Sechium edule
Sed0025173 Sechium edule
Sed0025373 Sechium edule
Sed0025555 Sechium edule
Sed0025723 Sechium edule
Sed0026224 Sechium edule
Sed0027920 Sechium edule
SEGI_41373 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09086 Striga asiatica
SGA_v2.0_scaffold229G43333 Striga asiatica
SGA_v2.0_scaffold37G14744 Striga asiatica
SGA_v2.0_scaffold5G02736 Striga asiatica
SGA_v2.0_scaffold64G21974 Striga asiatica
SHI11282 Sapria himalayana
SHI11286 Sapria himalayana
SHI18512 Sapria himalayana
SHI55003 Sapria himalayana
Solyc03g117290.1 Solanum lycopersicum
Solyc06g065900.4 Solanum lycopersicum
Solyc06g068330.1 Solanum lycopersicum
Solyc07g007330.1 Solanum lycopersicum
Solyc12g009880.1 Solanum lycopersicum
Sopen03g036180 Solanum pennellii
Sopen06g024360 Solanum pennellii
Sopen06g025600 Solanum pennellii
Sopen07g003390 Solanum pennellii
Sopen07g003400 Solanum pennellii
Sopen12g004760 Solanum pennellii
Sp2g22250 Schrenkiella parvula
Sp6g24050 Schrenkiella parvula
Sp6g32410 Schrenkiella parvula
TAR383G0024 Trochodendron aralioides
TAR383G0142 Trochodendron aralioides
TAR625G0846 Trochodendron aralioides
TAR626G1344 Trochodendron aralioides
TAR626G1674 Trochodendron aralioides
TAR636G0945 Trochodendron aralioides
THA.LOC104799741 Tarenaya hassleriana
THA.LOC104808950 Tarenaya hassleriana
THA.LOC104815293 Tarenaya hassleriana
THA.LOC104824652 Tarenaya hassleriana
THA.LOC104826566 Tarenaya hassleriana
Thecc.06G033900 Theobroma cacao
Thecc.06G034700 Theobroma cacao
Thecc.09G138900 Theobroma cacao
Thecc.09G139000 Theobroma cacao
Thecc.09G194200 Theobroma cacao
Thhalv10004807m.g Eutrema salsugineum
Thhalv10014629m.g Eutrema salsugineum
Thhalv10015868m.g Eutrema salsugineum
TPR.G28513 Trifolium pratense
TPR.G28514 Trifolium pratense
TPR.G3115 Trifolium pratense
TPR.G37198 Trifolium pratense
TWI14G0830 Tripterygium wilfordii
TWI32G1115 Tripterygium wilfordii
TWI34G1478 Tripterygium wilfordii
TWI63G0069 Tripterygium wilfordii
TWI63G1560 Tripterygium wilfordii
TWI63G1668 Tripterygium wilfordii
unitig_27.g24945 Utricularia gibba
unitig_52.g17466 Utricularia gibba
unitig_62.g23588 Utricularia gibba
unitig_748.g7551 Utricularia gibba
unitig_748.g8272 Utricularia gibba
vmacro06101 Vaccinium macrocarpon
vmacro19027 Vaccinium macrocarpon
vmacro19028 Vaccinium macrocarpon
vmacro21893 Vaccinium macrocarpon
vmacro23272 Vaccinium macrocarpon
VMungo0331G0974 Vigna mungo
VMungo0647G1144 Vigna mungo
VMungo1080G1076 Vigna mungo
VMungo1215G1963 Vigna mungo
VMungo1215G2360 Vigna mungo
VMungo1309G0137 Vigna mungo
VMungo1309G1018 Vigna mungo
VMungo1309G1589 Vigna mungo
Zm00001eb192200 Zea mays
Zm00001eb415230 Zea mays

User provided reference genes

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