Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18270 Brassica napus
A03p14370 Brassica napus
A03p57100 Brassica napus
A04p16550 Brassica napus
A05p17680 Brassica napus
A06p32650 Brassica napus
A08p01030 Brassica napus
A08p20520 Brassica napus
A10p12270 Brassica napus
Aa31LG3G10860 Aethionema arabicum
Aa31LG5G10290 Aethionema arabicum
Aa31LG5G10430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.497 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.504 Anthoceros agrestis
Actinidia05094 Actinidia chinensis
Actinidia05533 Actinidia chinensis
Actinidia09922 Actinidia chinensis
Actinidia11839 Actinidia chinensis
Actinidia30514 Actinidia chinensis
Ah.04g165550 Amaranthus hybridus
Ah.06g183000 Amaranthus hybridus
AL1G63050 Arabidopsis lyrata
AL7G25670 Arabidopsis lyrata
AL8G30190 Arabidopsis lyrata
AL8G30410 Arabidopsis lyrata
Aqoxy1G02149 Aquilegia oxysepala
Aqoxy1G02196 Aquilegia oxysepala
Aqoxy1G03684 Aquilegia oxysepala
Aqoxy4G00763 Aquilegia oxysepala
Aqoxy4G01912 Aquilegia oxysepala
Aqoxy4G01984 Aquilegia oxysepala
Aqoxy5G02893 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0D471F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.84X0J7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BB9CZ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CX54HG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I67UCX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SEZ8GA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.STW1HB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X2IQ10 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z3XL2P Arachis hypogaea
AT1G54290 Arabidopsis thaliana
AT4G27130 Arabidopsis thaliana
AT5G54760 Arabidopsis thaliana
AT5G54940 Arabidopsis thaliana
ATR0564G522 Amborella trichopoda
ATR1094G008 Amborella trichopoda
Atru.chr2.3226 Acer truncatum
Atru.chr2.3416 Acer truncatum
Atru.chr6.3159 Acer truncatum
AUR62015666 Chenopodium quinoa
AUR62015781 Chenopodium quinoa
AUR62020438 Chenopodium quinoa
AUR62020537 Chenopodium quinoa
BcaB01g04336 Brassica carinata
BcaB02g10849 Brassica carinata
BcaB03g12529 Brassica carinata
BcaB04g17004 Brassica carinata
BcaB06g26424 Brassica carinata
BcaB08g35860 Brassica carinata
BcaC01g01454 Brassica carinata
BcaC01g06331 Brassica carinata
BcaC04g20285 Brassica carinata
BcaC06g32709 Brassica carinata
BcaC07g38273 Brassica carinata
BcaC08g44177 Brassica carinata
BcaC09g50614 Brassica carinata
BcaNung03056 Brassica carinata
BolC1t02260H Brassica oleracea
BolC3t14095H Brassica oleracea
BolC6t36077H Brassica oleracea
BolC6t36769H Brassica oleracea
BolC8t48699H Brassica oleracea
BolC9t57416H Brassica oleracea
BolC9t57501H Brassica oleracea
BraA03t10734Z Brassica rapa
BraA03t14780Z Brassica rapa
BraA06t26193Z Brassica rapa
BraA08t32156Z Brassica rapa
BraA08t34008Z Brassica rapa
BraA10t43321Z Brassica rapa
C01p23270 Brassica napus
C03p16750 Brassica napus
C03p92210 Brassica napus
C06p10040 Brassica napus
C06p15780 Brassica napus
C07p54960 Brassica napus
C08p10200 Brassica napus
C09p45470 Brassica napus
CAN.G105.11 Capsicum annuum
CAN.G1110.7 Capsicum annuum
CAN.G1614.2 Capsicum annuum
CAN.G1781.1 Capsicum annuum
CAN.G248.39 Capsicum annuum
CAN.G337.134 Capsicum annuum
CAN.G337.93 Capsicum annuum
CAN.G404.7 Capsicum annuum
CAN.G542.2 Capsicum annuum
CAN.G853.26 Capsicum annuum
CANSAT11G1062 Cannabis sativa
CANSAT64G1314 Cannabis sativa
CARHR044650 Cardamine hirsuta
CARHR234780 Cardamine hirsuta
CARHR268100 Cardamine hirsuta
CARHR268280 Cardamine hirsuta
Carub.0001s4353 Capsella rubella
Carub.0007s1371 Capsella rubella
Carub.0008s1503 Capsella rubella
Carub.0008s1524 Capsella rubella
Ca_01741_v3 Cicer arietinum L.
Ca_06323_v3 Cicer arietinum L.
Ca_14729_v3 Cicer arietinum L.
Ca_26819_v3 Cicer arietinum L.
Ca_30696_v3 Cicer arietinum L.
CBR_g51038 Chara braunii
Cc00_g17530 Coffea canephora
Cc01_g03320 Coffea canephora
Cc02_g11690 Coffea canephora
Cc05_g13300 Coffea canephora
Cc05_g13640 Coffea canephora
Cc11_g05900 Coffea canephora
Cc11_g13220 Coffea canephora
CDE01G0169 Ceratophyllum demersum
CDE05G0208 Ceratophyllum demersum
CDE05G2686 Ceratophyllum demersum
CDE12G0563 Ceratophyllum demersum
Cfa014430 Carpinus fangiana
Cfa020339 Carpinus fangiana
Cfa020406 Carpinus fangiana
Ciclev10009975m.g Citrus clementina
Ciclev10017243m.g Citrus clementina
CiPaw.04G117100 Carya illinoinensis
CiPaw.11G184700 Carya illinoinensis
CiPaw.11G189900 Carya illinoinensis
CiPaw.12G126800 Carya illinoinensis
ClCG02G001820 Citrullus lanatus
ClCG09G010810 Citrullus lanatus
ClCG10G005380 Citrullus lanatus
COL.COLO4_09581 Corchorus olitorius
COL.COLO4_09586 Corchorus olitorius
Cpa.g.sc12.304 Carica papaya
Cpa.g.sc97.57 Carica papaya
Cre06.g298100 Chlamydomonas reinhardtii
CsaV3_3G005110 Cucumis sativus L.
CsaV3_7G003720 Cucumis sativus L.
CsaV3_7G021830 Cucumis sativus L.
CSS0013707 Camellia sinensis var. sinensis
CSS0017296 Camellia sinensis var. sinensis
CSS0028992 Camellia sinensis var. sinensis
CSS0031045 Camellia sinensis var. sinensis
CSS0046861 Camellia sinensis var. sinensis
DCAR_010025 Daucus carota
DCAR_016708 Daucus carota
DCAR_022531 Daucus carota
DCAR_024935 Daucus carota
Dinv02743 Davidia involucrata
Dinv20019 Davidia involucrata
Dinv34969 Davidia involucrata
Dinv39691 Davidia involucrata
Dinv40718 Davidia involucrata
Dinv40758 Davidia involucrata
Duzib170G0324 Durio zibethinus
Duzib170G1113 Durio zibethinus
Duzib170G1167 Durio zibethinus
Duzib213G0831 Durio zibethinus
Duzib235G0663 Durio zibethinus
Duzib268G0139 Durio zibethinus
ECA234G4308 Erigeron canadensis
ECA236G3197 Erigeron canadensis
ECA236G4110 Erigeron canadensis
ECA246G0958 Erigeron canadensis
ECA248G0225 Erigeron canadensis
EL10Ac4g07803 Beta vulgaris
Eucgr.F00759 Eucalyptus grandis
Eucgr.F00808 Eucalyptus grandis
Eucgr.F03432 Eucalyptus grandis
Eucgr.K00804 Eucalyptus grandis
FAN02G1403 Fragaria x ananassa
FAN02G1654 Fragaria x ananassa
FAN05G0314 Fragaria x ananassa
FAN05G4894 Fragaria x ananassa
FAN06G1025 Fragaria x ananassa
FAN09G3414 Fragaria x ananassa
FAN09G3786 Fragaria x ananassa
FAN11G3790 Fragaria x ananassa
FAN14G0079 Fragaria x ananassa
FAN14G4404 Fragaria x ananassa
FAN14G5236 Fragaria x ananassa
FAN16G0496 Fragaria x ananassa
FAN18G0096 Fragaria x ananassa
FAN19G0147 Fragaria x ananassa
FAN21G0079 Fragaria x ananassa
FAN21G1659 Fragaria x ananassa
FAN25G0363 Fragaria x ananassa
FAN25G2686 Fragaria x ananassa
FvH4_3g21930 Fragaria vesca
FvH4_3g22740 Fragaria vesca
FvH4_6g43460 Fragaria vesca
FvH4_6g45690 Fragaria vesca
Glyma.02G291500 Glycine max
Glyma.06G269500 Glycine max
Glyma.06G269600 Glycine max
Glyma.08G316700 Glycine max
Glyma.12G100700 Glycine max
Glyma.12G135100 Glycine max
Glyma.14G023300 Glycine max
Glyma.18G096400 Glycine max
Glyma.U031613 Glycine max
Gohir.A01G075300 Gossypium hirsutum
Gohir.A01G075600 Gossypium hirsutum
Gohir.A01G079800 Gossypium hirsutum
Gohir.A04G021000 Gossypium hirsutum
Gohir.A04G021200 Gossypium hirsutum
Gohir.A11G280100 Gossypium hirsutum
Gohir.A11G280201 Gossypium hirsutum
Gohir.A13G137800 Gossypium hirsutum
Gohir.A13G140800 Gossypium hirsutum
Gohir.D01G062600 Gossypium hirsutum
Gohir.D01G062900 Gossypium hirsutum
Gohir.D01G067000 Gossypium hirsutum
Gohir.D05G365600 Gossypium hirsutum
Gohir.D05G365700 Gossypium hirsutum
Gohir.D11G290400 Gossypium hirsutum
Gohir.D11G290500 Gossypium hirsutum
Gohir.D13G142600 Gossypium hirsutum
Gohir.D13G145600 Gossypium hirsutum
Gorai.002G083300 Gossypium raimondii
Gorai.002G083600 Gossypium raimondii
Gorai.002G088900 Gossypium raimondii
Gorai.004G147000 Gossypium raimondii
Gorai.007G314200 Gossypium raimondii
Gorai.007G314400 Gossypium raimondii
Gorai.009G426400 Gossypium raimondii
Gorai.009G426500 Gossypium raimondii
Gorai.013G159400 Gossypium raimondii
Gorai.013G163400 Gossypium raimondii
GSVIVG01001974001 Vitis vinifera
GSVIVG01030611001 Vitis vinifera
GSVIVG01037653001 Vitis vinifera
HanXRQChr01g0003681 Helianthus annuus
HanXRQChr05g0159351 Helianthus annuus
HanXRQChr08g0233421 Helianthus annuus
HanXRQChr09g0244911 Helianthus annuus
HanXRQChr11g0337801 Helianthus annuus
HanXRQChr15g0494721 Helianthus annuus
HanXRQChr16g0515871 Helianthus annuus
Haze_09623 Corylus avellana
Haze_12889 Corylus avellana
Haze_26510 Corylus avellana
Hma1.2p1_0249F.1_g102400 Hydrangea macrophylla
Hma1.2p1_0613F.1_g189100 Hydrangea macrophylla
Hma1.2p1_1067F.1_g253945 Hydrangea macrophylla
Hma1.2p1_1564F.1_g290860 Hydrangea macrophylla
Hma1.2p1_1869F.1_g306070 Hydrangea macrophylla
Hma1.2p1_2518F.1_g323750 Hydrangea macrophylla
HPP92_002193 Vanilla planifolia
HPP92_010085 Vanilla planifolia
HPP92_010094 Vanilla planifolia
HPP92_013324 Vanilla planifolia
HPP92_017612 Vanilla planifolia
Hund02121 Selenicereus undatus
Hund23240 Selenicereus undatus
Hund23300 Selenicereus undatus
Hund23302 Selenicereus undatus
Lalb_Chr03g0028841 Lupinus albus
Lalb_Chr10g0107011 Lupinus albus
Lalb_Chr14g0366191 Lupinus albus
Lalb_Chr19g0135721 Lupinus albus
Lalb_Chr20g0113841 Lupinus albus
Lalb_Chr22g0357041 Lupinus albus
Lalb_Chr24g0393101 Lupinus albus
Lj1C1225T5 Lonicera japonica
Lj3g0008462 Lotus japonicus
Lj3g0012382 Lotus japonicus
Lj3g0023085 Lotus japonicus
Lj6g0005421 Lotus japonicus
LjContig00272g0018972 Lotus japonicus
Lsat_1_v5_gn_4_59141 Lactuca sativa
Lsat_1_v5_gn_5_3900 Lactuca sativa
Lsat_1_v5_gn_5_5920 Lactuca sativa
Lsat_1_v5_gn_7_107961 Lactuca sativa
Manes.03G123618 Manihot esculenta
Manes.03G129600 Manihot esculenta
Manes.15G071500 Manihot esculenta
Manes.15G075700 Manihot esculenta
Manes.16G011900 Manihot esculenta
Mapoly0052s0129 Marchantia polymorpha
MBI01_g01361_MAGBIO Magnolia biondii
MBI02_g21868_MAGBIO Magnolia biondii
MBI16_g18433_MAGBIO Magnolia biondii
MBI16_g39619_MAGBIO Magnolia biondii
MBI18_g14134_MAGBIO Magnolia biondii
MCO05G538 Micromonas commoda
MD03G1200400 Malus domestica
MD03G1210300 Malus domestica
MD10G1068300 Malus domestica
MD11G1217400 Malus domestica
MD11G1224900 Malus domestica
MD17G1071700 Malus domestica
MD17G1094100 Malus domestica
Medtr2g083180 Medicago truncatula
Medtr3g051950 Medicago truncatula
Medtr4g046733 Medicago truncatula
Medtr5g092820 Medicago truncatula
MELO3C013163.2 Cucumis melo
MELO3C018807.2 Cucumis melo
MELO3C025375.2 Cucumis melo
Migut.H01825 Erythranthe guttata
Migut.H01850 Erythranthe guttata
Migut.M01284 Erythranthe guttata
Migut.M01758 Erythranthe guttata
Migut.M01804 Erythranthe guttata
MSTRG.12974 Avicennia marina
MSTRG.14420 Avicennia marina
MSTRG.15146 Avicennia marina
MSTRG.15167 Avicennia marina
MSTRG.6893 Avicennia marina
MSTRG.6922 Avicennia marina
Nitab4.5_0000091g0470 Nicotiana tabacum
Nitab4.5_0000092g0070 Nicotiana tabacum
Nitab4.5_0000397g0020 Nicotiana tabacum
Nitab4.5_0002229g0160 Nicotiana tabacum
Nitab4.5_0002342g0080 Nicotiana tabacum
Nitab4.5_0002613g0040 Nicotiana tabacum
Nitab4.5_0003397g0090 Nicotiana tabacum
Nitab4.5_0003495g0060 Nicotiana tabacum
Nitab4.5_0006685g0010 Nicotiana tabacum
Nitab4.5_0008278g0020 Nicotiana tabacum
Nn1g02296 Nelumbo nucifera
Nn1g03521 Nelumbo nucifera
Nn1g03631 Nelumbo nucifera
Nn1g07039 Nelumbo nucifera
Nn1g07131 Nelumbo nucifera
Nn2g13179 Nelumbo nucifera
Nn3g21090 Nelumbo nucifera
Nn4g22920 Nelumbo nucifera
Nn4g26301 Nelumbo nucifera
Nn5g27624 Nelumbo nucifera
Nn5g29060 Nelumbo nucifera
Nn6g32092 Nelumbo nucifera
Oeu005451.1 Olea europaea
Oeu005524.2 Olea europaea
Oeu007578.1 Olea europaea
Oeu021410.1 Olea europaea
Oeu037350.1 Olea europaea
Oeu042766.1 Olea europaea
Oeu062610.2 Olea europaea
Oeu062697.1 Olea europaea
Os01g0225550 Oryza sativa ssp. japonica
Os01g0794500 Oryza sativa ssp. japonica
Os02g0151501 Oryza sativa ssp. japonica
Os04g0627900 Oryza sativa ssp. japonica
Os05g0498400 Oryza sativa ssp. japonica
Os07g0529800 Oryza sativa ssp. japonica
Peaxi162Scf00000g08420 Petunia axillaris
Peaxi162Scf00082g00098 Petunia axillaris
Peaxi162Scf00521g00816 Petunia axillaris
Peaxi162Scf00660g00083 Petunia axillaris
Peaxi162Scf00678g00014 Petunia axillaris
Peaxi162Scf00964g00001 Petunia axillaris
Peaxi162Scf01086g00141 Petunia axillaris
PGR031G1833 Punica granatum
PGR083G1375 Punica granatum
PGR142G0246 Punica granatum
PGSC0003DMG400014429 Solanum tuberosum
PGSC0003DMG400019258 Solanum tuberosum
PGSC0003DMG400022216 Solanum tuberosum
PGSC0003DMG400024072 Solanum tuberosum
PGSC0003DMG400025619 Solanum tuberosum
PGSC0003DMG400040844 Solanum tuberosum
Phvul.006G043900 Phaseolus vulgaris
Phvul.008G267800 Phaseolus vulgaris
Phvul.011G105700 Phaseolus vulgaris
Phvul.011G138900 Phaseolus vulgaris
Phvul.011G139000 Phaseolus vulgaris
Potri.001G418600 Populus trichocarpa
Potri.007G122600 Populus trichocarpa
Potri.007G122700 Populus trichocarpa
Potri.010G151700 Populus trichocarpa
Potri.011G134700 Populus trichocarpa
Potri.017G037100 Populus trichocarpa
Pp3c16_21900 Physcomitrium patens
Pp3c5_24200 Physcomitrium patens
Pp3c6_4020 Physcomitrium patens
PRCOL_00001014 Prasinoderma coloniale
Prupe.3G219300 Prunus persica
Prupe.3G243100 Prunus persica
Prupe.4G205000 Prunus persica
Prupe.4G213900 Prunus persica
Psat2g011400 Pisum sativum
Psat5g179280 Pisum sativum
Psat5g251920 Pisum sativum
Psat7g154160 Pisum sativum
PSO210G1869 Papaver somniferum
PSO210G3175 Papaver somniferum
PSO541G0697 Papaver somniferum
PSO541G4338 Papaver somniferum
PSO675G5854 Papaver somniferum
PSO675G7197 Papaver somniferum
PSO832G0350 Papaver somniferum
QL05p074956 Quercus lobata
QL08p010022 Quercus lobata
QL08p012965 Quercus lobata
QL08p033629 Quercus lobata
QL93p0073_0487 Quercus lobata
RcHm_v2.0_Chr2g0159931 Rosa chinensis
RcHm_v2.0_Chr2g0163841 Rosa chinensis
RcHm_v2.0_Chr4g0415161 Rosa chinensis
RcHm_v2.0_Chr5g0037751 Rosa chinensis
RcHm_v2.0_Chr5g0039691 Rosa chinensis
Rhsim02G0111900 Rhododendron simsii
Rhsim04G0056000 Rhododendron simsii
Rhsim08G0249500 Rhododendron simsii
RhsimUnG0250300 Rhododendron simsii
Sabra07G0099300 Salix brachista
Sabra11G0120800 Salix brachista
Sabra16G0284200 Salix brachista
SalBow8G4093 Salvia bowleyana
Sc03g0008580 Simmondsia chinensis
Sc16g0006380 Simmondsia chinensis
Sc21g0001610 Simmondsia chinensis
Sed0014793 Sechium edule
Sed0015673 Sechium edule
Sed0016288 Sechium edule
Sed0026497 Sechium edule
SEGI_03369 Sequoiadendron giganteum
SEGI_10330 Sequoiadendron giganteum
SEGI_21003 Sequoiadendron giganteum
SEGI_30534 Sequoiadendron giganteum
SGA_v2.0_scaffold114G32028 Striga asiatica
SGA_v2.0_scaffold18G08539 Striga asiatica
SGA_v2.0_scaffold7G03881 Striga asiatica
SGA_v2.0_scaffold9G05044 Striga asiatica
SHI31862 Sapria himalayana
SMO174G0133 Selaginella moellendorffii
SMO174G0137 Selaginella moellendorffii
SMO308G0009 Selaginella moellendorffii
SMO367G0942 Selaginella moellendorffii
Solyc03g031810.3 Solanum lycopersicum
Solyc07g064150.4 Solanum lycopersicum
Solyc07g064620.2 Solanum lycopersicum
Solyc10g006280.1 Solanum lycopersicum
Solyc10g006470.3 Solanum lycopersicum
Sopen03g005670 Solanum pennellii
Sopen07g032290 Solanum pennellii
Sopen07g032810 Solanum pennellii
Sopen10g002420 Solanum pennellii
Sp5g17640 Schrenkiella parvula
Sp6g16900 Schrenkiella parvula
Sp7g25100 Schrenkiella parvula
TAR624G1287 Trochodendron aralioides
TAR626G0021 Trochodendron aralioides
TAR627G0346 Trochodendron aralioides
TAR629G0051 Trochodendron aralioides
THA.LOC104809146 Tarenaya hassleriana
THA.LOC104813417 Tarenaya hassleriana
THA.LOC104815636 Tarenaya hassleriana
THA.LOC104817653 Tarenaya hassleriana
THA.LOC104817666 Tarenaya hassleriana
Thecc.07G036100 Theobroma cacao
Thecc.07G050700 Theobroma cacao
Thecc.07G051200 Theobroma cacao
Thhalv10011880m.g Eutrema salsugineum
Thhalv10015063m.g Eutrema salsugineum
Thhalv10026037m.g Eutrema salsugineum
TPR.G1174 Trifolium pratense
TPR.G19057 Trifolium pratense
TPR.G34802 Trifolium pratense
TWI18G0282 Tripterygium wilfordii
TWI38G0117 Tripterygium wilfordii
TWI38G1044 Tripterygium wilfordii
TWI38G1421 Tripterygium wilfordii
TWI38G1852 Tripterygium wilfordii
TWI39G0925 Tripterygium wilfordii
TWI75G1842 Tripterygium wilfordii
unitig_26.g9966 Utricularia gibba
unitig_578.g16767 Utricularia gibba
unitig_746.g26808 Utricularia gibba
unitig_749.g13970 Utricularia gibba
vmacro08624 Vaccinium macrocarpon
vmacro08625 Vaccinium macrocarpon
vmacro09708 Vaccinium macrocarpon
vmacro09709 Vaccinium macrocarpon
vmacro11724 Vaccinium macrocarpon
vmacro11761 Vaccinium macrocarpon
vmacro12224 Vaccinium macrocarpon
vmacro15830 Vaccinium macrocarpon
VMungo0540G0223 Vigna mungo
VMungo0540G2514 Vigna mungo
VMungo1127G0095 Vigna mungo
VMungo1127G2152 Vigna mungo
Zm00001eb150960 Zea mays
Zm00001eb267190 Zea mays
Zm00001eb291810 Zea mays
Zm00001eb323110 Zea mays

User provided reference genes

Program Settings