Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p38440 Brassica napus
A02p06010 Brassica napus
A03p39420 Brassica napus
A05p18850 Brassica napus
A05p18990 Brassica napus
A05p33770 Brassica napus
A06p01680 Brassica napus
A06p32330 Brassica napus
A08p01950 Brassica napus
Aa31LG10G2350 Aethionema arabicum
Aa31LG7G2770 Aethionema arabicum
Aa31LG8G2850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1448 Anthoceros agrestis
Actinidia08813 Actinidia chinensis
Actinidia13252 Actinidia chinensis
Actinidia16000 Actinidia chinensis
Actinidia22010 Actinidia chinensis
Actinidia22366 Actinidia chinensis
Actinidia40446 Actinidia chinensis
Ah.09g225650 Amaranthus hybridus
Ah.10g026230 Amaranthus hybridus
Ah.12g064000 Amaranthus hybridus
AL1G54200 Arabidopsis lyrata
AL1G56470 Arabidopsis lyrata
AL1G60710 Arabidopsis lyrata
AL1G60980 Arabidopsis lyrata
AL1G60990 Arabidopsis lyrata
AL1G61000 Arabidopsis lyrata
AL1G61010 Arabidopsis lyrata
AL3G28310 Arabidopsis lyrata
AL3G41460 Arabidopsis lyrata
AL6G31610 Arabidopsis lyrata
Aqoxy7G02074 Aquilegia oxysepala
Aqoxy7G03751 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.407M44 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.86V3X8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ERFU6K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IB1TIP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IIC4VI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KX3KG5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NM15TM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5HWQ6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZL0G7D Arachis hypogaea
AT1G47780 Arabidopsis thaliana
AT1G47786 Arabidopsis thaliana
AT1G51300 Arabidopsis thaliana
AT1G52440 Arabidopsis thaliana
AT1G52460 Arabidopsis thaliana
AT1G52470 Arabidopsis thaliana
AT1G52695 Arabidopsis thaliana
AT1G52700 Arabidopsis thaliana
AT3G15650 Arabidopsis thaliana
AT5G20060 Arabidopsis thaliana
ATR0815G019 Amborella trichopoda
Atru.chr1.3108 Acer truncatum
Atru.chr1.3109 Acer truncatum
Atru.chr7.1231 Acer truncatum
Atru.chr7.2382 Acer truncatum
AUR62011076 Chenopodium quinoa
AUR62011571 Chenopodium quinoa
AUR62016388 Chenopodium quinoa
AUR62018335 Chenopodium quinoa
AUR62024884 Chenopodium quinoa
AUR62026188 Chenopodium quinoa
AUR62029061 Chenopodium quinoa
AUR62030663 Chenopodium quinoa
AUR62033458 Chenopodium quinoa
AUR62042226 Chenopodium quinoa
AUR62043015 Chenopodium quinoa
BcaB01g04812 Brassica carinata
BcaB01g04813 Brassica carinata
BcaB02g10975 Brassica carinata
BcaB04g17146 Brassica carinata
BcaB04g20255 Brassica carinata
BcaB04g20910 Brassica carinata
BcaB05g22876 Brassica carinata
BcaC01g01335 Brassica carinata
BcaC01g02780 Brassica carinata
BcaC01g03864 Brassica carinata
BcaC03g13729 Brassica carinata
BcaC06g33327 Brassica carinata
BcaC08g43997 Brassica carinata
BcaC08g44010 Brassica carinata
BcaC09g48545 Brassica carinata
BcaC09g48546 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01830 Brassica napus
BolC1t04830H Brassica oleracea
BolC2t07011H Brassica oleracea
BolC3t17059H Brassica oleracea
BolC3t18311H Brassica oleracea
BolC3t21402H Brassica oleracea
BolC5t33828H Brassica oleracea
BolC6t36580H Brassica oleracea
BolC6t36597H Brassica oleracea
BraA01t03894Z Brassica rapa
BraA03t13092Z Brassica rapa
BraA05t20781Z Brassica rapa
BraA05t22200Z Brassica rapa
BraA06t23386Z Brassica rapa
BraA06t26159Z Brassica rapa
BraA08t32247Z Brassica rapa
C01p48750 Brassica napus
C03p47800 Brassica napus
C03p60510 Brassica napus
C03p90840 Brassica napus
C05p50780 Brassica napus
C06p14030 Brassica napus
C06p14220 Brassica napus
C07p45990 Brassica napus
CAN.G395.43 Capsicum annuum
CAN.G713.24 Capsicum annuum
CAN.G98.31 Capsicum annuum
CANSAT56G0458 Cannabis sativa
CANSAT56G2832 Cannabis sativa
CARHR042830 Cardamine hirsuta
CARHR042840 Cardamine hirsuta
CARHR090740 Cardamine hirsuta
CARHR107260 Cardamine hirsuta
CARHR179860 Cardamine hirsuta
CARHR192770 Cardamine hirsuta
Carub.0001s4143 Capsella rubella
Carub.0001s4144 Capsella rubella
Carub.0001s4170 Capsella rubella
Carub.0001s4171 Capsella rubella
Carub.0001s4172 Capsella rubella
Carub.0001s4173 Capsella rubella
Carub.0001s4174 Capsella rubella
Carub.0001s4176 Capsella rubella
Carub.0002s0914 Capsella rubella
Carub.0002s0920 Capsella rubella
Carub.0003s1540 Capsella rubella
Carub.0006s1844 Capsella rubella
Ca_01087_v3 Cicer arietinum L.
Ca_15723_v3 Cicer arietinum L.
Ca_27311_v3 Cicer arietinum L.
CBR_g44615 Chara braunii
Cc00_g31930 Coffea canephora
Cc04_g03960 Coffea canephora
Cc06_g08890 Coffea canephora
Cc11_g01870 Coffea canephora
Cc11_g01880 Coffea canephora
CDE01G0286 Ceratophyllum demersum
CDE03G0268 Ceratophyllum demersum
Cfa002014 Carpinus fangiana
Cfa003335 Carpinus fangiana
Cfa013174 Carpinus fangiana
Cfa025025 Carpinus fangiana
Cfa025413 Carpinus fangiana
Ciclev10009080m.g Citrus clementina
Ciclev10009255m.g Citrus clementina
Ciclev10026074m.g Citrus clementina
CiPaw.01G243800 Carya illinoinensis
CiPaw.02G154500 Carya illinoinensis
CiPaw.03G240400 Carya illinoinensis
CiPaw.04G169800 Carya illinoinensis
CiPaw.07G221100 Carya illinoinensis
CiPaw.08G013100 Carya illinoinensis
ClCG06G010850 Citrullus lanatus
ClCG07G012850 Citrullus lanatus
ClCG08G013150 Citrullus lanatus
COL.COLO4_12885 Corchorus olitorius
COL.COLO4_23980 Corchorus olitorius
COL.COLO4_35184 Corchorus olitorius
Cpa.g.sc10.220 Carica papaya
Cpa.g.sc115.17 Carica papaya
Cpa.g.sc75.70 Carica papaya
Cpa.g.sc75.71 Carica papaya
Cre03.g164350 Chlamydomonas reinhardtii
CsaV3_1G029760 Cucumis sativus L.
CsaV3_2G031870 Cucumis sativus L.
CsaV3_4G001340 Cucumis sativus L.
CSS0001642 Camellia sinensis var. sinensis
CSS0002715 Camellia sinensis var. sinensis
CSS0003754 Camellia sinensis var. sinensis
CSS0004209 Camellia sinensis var. sinensis
CSS0011255 Camellia sinensis var. sinensis
CSS0016034 Camellia sinensis var. sinensis
CSS0016205 Camellia sinensis var. sinensis
CSS0025619 Camellia sinensis var. sinensis
CSS0028726 Camellia sinensis var. sinensis
CSS0031623 Camellia sinensis var. sinensis
CSS0037505 Camellia sinensis var. sinensis
CSS0041405 Camellia sinensis var. sinensis
CSS0048549 Camellia sinensis var. sinensis
DCAR_003042 Daucus carota
DCAR_009207 Daucus carota
DCAR_014862 Daucus carota
DCAR_021327 Daucus carota
DCAR_025481 Daucus carota
Dinv11621 Davidia involucrata
Dinv30171 Davidia involucrata
Dinv30564 Davidia involucrata
Dinv30565 Davidia involucrata
Dinv36565 Davidia involucrata
Dinv38094 Davidia involucrata
Dinv41541 Davidia involucrata
Duzib150G0113 Durio zibethinus
Duzib168G0039 Durio zibethinus
Duzib168G0537 Durio zibethinus
Duzib168G1811 Durio zibethinus
Duzib187G0080 Durio zibethinus
Duzib187G1797 Durio zibethinus
Duzib235G0607 Durio zibethinus
ECA232G1741 Erigeron canadensis
ECA234G2925 Erigeron canadensis
ECA234G4366 Erigeron canadensis
ECA240G2187 Erigeron canadensis
ECA246G3329 Erigeron canadensis
ECA247G0621 Erigeron canadensis
EL10Ac1g01026 Beta vulgaris
EL10Ac2g02596 Beta vulgaris
EL10Ac8g18599 Beta vulgaris
EL10Ac9g21951 Beta vulgaris
Eucgr.C01119 Eucalyptus grandis
Eucgr.F02550 Eucalyptus grandis
Eucgr.J03039 Eucalyptus grandis
FAN02G4112 Fragaria x ananassa
FAN05G1538 Fragaria x ananassa
FAN09G3099 Fragaria x ananassa
FAN14G3513 Fragaria x ananassa
FAN15G1043 Fragaria x ananassa
FAN19G0437 Fragaria x ananassa
FAN20G2523 Fragaria x ananassa
FAN23G1170 Fragaria x ananassa
FAN24G2862 Fragaria x ananassa
FAN26G2167 Fragaria x ananassa
FAN27G1991 Fragaria x ananassa
FAN28G0750 Fragaria x ananassa
FvH4_1g03850 Fragaria vesca
FvH4_2g29580 Fragaria vesca
FvH4_6g30430 Fragaria vesca
Glyma.04G068500 Glycine max
Glyma.04G149900 Glycine max
Glyma.06G070100 Glycine max
Glyma.06G215700 Glycine max
Glyma.06G215900 Glycine max
Glyma.07G032700 Glycine max
Glyma.08G209800 Glycine max
Glyma.13G363000 Glycine max
Glyma.15G010800 Glycine max
Gohir.A05G018800 Gossypium hirsutum
Gohir.A05G124700 Gossypium hirsutum
Gohir.A06G057550 Gossypium hirsutum
Gohir.A06G057600 Gossypium hirsutum
Gohir.A06G187100 Gossypium hirsutum
Gohir.A09G112675 Gossypium hirsutum
Gohir.A10G076600 Gossypium hirsutum
Gohir.A13G198800 Gossypium hirsutum
Gohir.D05G019900 Gossypium hirsutum
Gohir.D05G125700 Gossypium hirsutum
Gohir.D06G055900 Gossypium hirsutum
Gohir.D06G193300 Gossypium hirsutum
Gohir.D10G074700 Gossypium hirsutum
Gohir.D13G204200 Gossypium hirsutum
Gorai.009G020100 Gossypium raimondii
Gorai.009G129700 Gossypium raimondii
Gorai.010G065200 Gossypium raimondii
Gorai.010G065500 Gossypium raimondii
Gorai.010G227200 Gossypium raimondii
Gorai.011G080600 Gossypium raimondii
Gorai.013G233000 Gossypium raimondii
GSVIVG01015490001 Vitis vinifera
GSVIVG01017241001 Vitis vinifera
GSVIVG01035817001 Vitis vinifera
HanXRQChr00c0540g0575641 Helianthus annuus
HanXRQChr02g0032511 Helianthus annuus
HanXRQChr02g0050801 Helianthus annuus
HanXRQChr04g0096731 Helianthus annuus
HanXRQChr04g0097201 Helianthus annuus
HanXRQChr06g0180221 Helianthus annuus
HanXRQChr09g0274901 Helianthus annuus
HanXRQChr10g0303861 Helianthus annuus
HanXRQChr13g0402721 Helianthus annuus
HanXRQChr16g0500571 Helianthus annuus
HanXRQChr16g0501371 Helianthus annuus
Haze_16507 Corylus avellana
Haze_21559 Corylus avellana
Haze_25629 Corylus avellana
Hma1.2p1_0000F.1_g000640 Hydrangea macrophylla
Hma1.2p1_0018F.1_g012760 Hydrangea macrophylla
HPP92_009842 Vanilla planifolia
Hund00553 Selenicereus undatus
Hund03021 Selenicereus undatus
Hund06584 Selenicereus undatus
Hund09152 Selenicereus undatus
Hund26471 Selenicereus undatus
Lalb_Chr08g0234851 Lupinus albus
Lalb_Chr08g0243971 Lupinus albus
Lalb_Chr11g0063841 Lupinus albus
Lalb_Chr14g0373661 Lupinus albus
Lalb_Chr23g0275281 Lupinus albus
Lalb_Chr24g0395621 Lupinus albus
Lalb_Chr25g0279511 Lupinus albus
Lalb_Chr25g0279521 Lupinus albus
Lj1g0018853 Lotus japonicus
Lj1g0023618 Lotus japonicus
Lj3g0016654 Lotus japonicus
Lj3g0022336 Lotus japonicus
Lj5C68T14 Lonicera japonica
Lj7A633T40 Lonicera japonica
Lj8C624T9 Lonicera japonica
Lj9C502G2 Lonicera japonica
Lsat_1_v5_gn_1_33581 Lactuca sativa
Lsat_1_v5_gn_4_106341 Lactuca sativa
Lsat_1_v5_gn_5_31640 Lactuca sativa
Lsat_1_v5_gn_5_92300 Lactuca sativa
Lsat_1_v5_gn_5_98900 Lactuca sativa
Lsat_1_v5_gn_6_22260 Lactuca sativa
Lsat_1_v5_gn_7_42521 Lactuca sativa
Lsat_1_v5_gn_8_57300 Lactuca sativa
Manes.03G017200 Manihot esculenta
Manes.04G117300 Manihot esculenta
Manes.06G053100 Manihot esculenta
Manes.11G052300 Manihot esculenta
Manes.14G129428 Manihot esculenta
MBI01_g11881_MAGBIO Magnolia biondii
MBI04_g10414_MAGBIO Magnolia biondii
MCO05G361 Micromonas commoda
MCO11G308 Micromonas commoda
MD02G1036900 Malus domestica
MD08G1145500 Malus domestica
MD09G1221600 Malus domestica
MD15G1121100 Malus domestica
MD15G1177000 Malus domestica
MD17G1203800 Malus domestica
Medtr2g054780 Medicago truncatula
Medtr2g103140 Medicago truncatula
Medtr3g107630 Medicago truncatula
Medtr4g011320 Medicago truncatula
MELO3C011237.2 Cucumis melo
MELO3C017906.2 Cucumis melo
MELO3C026638.2 Cucumis melo
MELO3C029577.2 Cucumis melo
Migut.E01472 Erythranthe guttata
Migut.I00804 Erythranthe guttata
Migut.O00076 Erythranthe guttata
MSTRG.11114 Avicennia marina
MSTRG.11774 Avicennia marina
MSTRG.1636 Avicennia marina
MSTRG.22724 Avicennia marina
Nitab4.5_0000151g0120 Nicotiana tabacum
Nitab4.5_0000620g0100 Nicotiana tabacum
Nitab4.5_0001672g0060 Nicotiana tabacum
Nitab4.5_0003011g0010 Nicotiana tabacum
Nitab4.5_0003512g0040 Nicotiana tabacum
Nitab4.5_0003722g0010 Nicotiana tabacum
Nitab4.5_0004789g0010 Nicotiana tabacum
Nitab4.5_0005275g0060 Nicotiana tabacum
Nn2g11941 Nelumbo nucifera
Nn6g34041 Nelumbo nucifera
Nn8g39373 Nelumbo nucifera
Oeu018455.2 Olea europaea
Oeu021593.1 Olea europaea
Oeu030206.1 Olea europaea
Oeu033462.1 Olea europaea
Oeu052289.1 Olea europaea
Oeu063815.1 Olea europaea
Oeu063818.1 Olea europaea
Os01g0175000 Oryza sativa ssp. japonica
Os01g0612500 Oryza sativa ssp. japonica
Os04g0174900 Oryza sativa ssp. japonica
Os05g0588100 Oryza sativa ssp. japonica
Peaxi162Scf00015g00440 Petunia axillaris
Peaxi162Scf00034g01310 Petunia axillaris
Peaxi162Scf00207g00737 Petunia axillaris
Peaxi162Scf00341g00015 Petunia axillaris
Peaxi162Scf00546g00534 Petunia axillaris
PGR031G0110 Punica granatum
PGR102G2686 Punica granatum
PGR142G2359 Punica granatum
PGSC0003DMG400028544 Solanum tuberosum
PGSC0003DMG400028622 Solanum tuberosum
PGSC0003DMG400033649 Solanum tuberosum
Phvul.005G174700 Phaseolus vulgaris
Phvul.009G095000 Phaseolus vulgaris
Phvul.009G198700 Phaseolus vulgaris
Phvul.010G153400 Phaseolus vulgaris
Potri.001G173700 Populus trichocarpa
Potri.003G060300 Populus trichocarpa
Potri.006G251100 Populus trichocarpa
Potri.018G030200 Populus trichocarpa
Potri.018G070700 Populus trichocarpa
Pp3c12_16460 Physcomitrium patens
Pp3c21_6410 Physcomitrium patens
Prupe.1G473700 Prunus persica
Prupe.3G078700 Prunus persica
Prupe.7G238500 Prunus persica
Psat0ss3186g0320 Pisum sativum
Psat1g026760 Pisum sativum
Psat5g300520 Pisum sativum
Psat7g255120 Pisum sativum
PSO170G3226 Papaver somniferum
PSO210G1247 Papaver somniferum
PSO210G3662 Papaver somniferum
PSO210G4920 Papaver somniferum
PSO210G5233 Papaver somniferum
PSO339G3506 Papaver somniferum
PSO384G0068 Papaver somniferum
PSO455G0091 Papaver somniferum
QL02p022448 Quercus lobata
QL02p087480 Quercus lobata
QL05p027571 Quercus lobata
RcHm_v2.0_Chr2g0089241 Rosa chinensis
RcHm_v2.0_Chr2g0136771 Rosa chinensis
RcHm_v2.0_Chr4g0431191 Rosa chinensis
RcHm_v2.0_Chr6g0298561 Rosa chinensis
Rhsim01G0077600 Rhododendron simsii
Rhsim07G0148200 Rhododendron simsii
Rhsim08G0216700 Rhododendron simsii
Rhsim12G0193600 Rhododendron simsii
Sabra01G0138100 Salix brachista
Sabra03G0034600 Salix brachista
Sabra18G0031900 Salix brachista
Sabra18G0061800 Salix brachista
SalBow2G1720 Salvia bowleyana
SalBow2G2691 Salvia bowleyana
SalBow4G1356 Salvia bowleyana
SalBow6G6322 Salvia bowleyana
Sc08g0006820 Simmondsia chinensis
Sc10g0005580 Simmondsia chinensis
Sc18g0000800 Simmondsia chinensis
Sc23g0006900 Simmondsia chinensis
Sed0003376 Sechium edule
Sed0005386 Sechium edule
Sed0005651 Sechium edule
Sed0011913 Sechium edule
Sed0014878 Sechium edule
Sed0015148 Sechium edule
Sed0024054 Sechium edule
SEGI_05105 Sequoiadendron giganteum
SEGI_16479 Sequoiadendron giganteum
SEGI_25548 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09930 Striga asiatica
SGA_v2.0_scaffold37G14788 Striga asiatica
SMO347G0182 Selaginella moellendorffii
Solyc06g067950.3 Solanum lycopersicum
Solyc08g067160.3 Solanum lycopersicum
Solyc12g006870.2 Solanum lycopersicum
Solyc12g042890.2 Solanum lycopersicum
Sopen06g025230 Solanum pennellii
Sopen08g021100 Solanum pennellii
Sopen12g002840 Solanum pennellii
Sopen12g022050 Solanum pennellii
Sp1g39240 Schrenkiella parvula
Sp1g39250 Schrenkiella parvula
Sp1g39260 Schrenkiella parvula
Sp1g39270 Schrenkiella parvula
Sp3g13950 Schrenkiella parvula
Sp6g24350 Schrenkiella parvula
TAR383G0219 Trochodendron aralioides
TAR625G1143 Trochodendron aralioides
TAR626G0257 Trochodendron aralioides
TAR636G1807 Trochodendron aralioides
TAR636G2536 Trochodendron aralioides
THA.LOC104799650 Tarenaya hassleriana
THA.LOC104811039 Tarenaya hassleriana
THA.LOC104818038 Tarenaya hassleriana
Thecc.06G074300 Theobroma cacao
Thecc.09G121300 Theobroma cacao
Thecc.09G149400 Theobroma cacao
Thhalv10011726m.g Eutrema salsugineum
Thhalv10011946m.g Eutrema salsugineum
Thhalv10011963m.g Eutrema salsugineum
Thhalv10012079m.g Eutrema salsugineum
Thhalv10012083m.g Eutrema salsugineum
Thhalv10012094m.g Eutrema salsugineum
Thhalv10012118m.g Eutrema salsugineum
Thhalv10012252m.g Eutrema salsugineum
Thhalv10014480m.g Eutrema salsugineum
Thhalv10021374m.g Eutrema salsugineum
TPR.G15009 Trifolium pratense
TPR.G1701 Trifolium pratense
TPR.G31758 Trifolium pratense
TWI12G0346 Tripterygium wilfordii
TWI32G0977 Tripterygium wilfordii
TWI34G0221 Tripterygium wilfordii
TWI34G0483 Tripterygium wilfordii
TWI63G1680 Tripterygium wilfordii
TWI75G0422 Tripterygium wilfordii
unitig_27.g25339 Utricularia gibba
unitig_61.g26248 Utricularia gibba
unitig_744.g24454 Utricularia gibba
vmacro05193 Vaccinium macrocarpon
vmacro16920 Vaccinium macrocarpon
vmacro20654 Vaccinium macrocarpon
VMungo0331G1421 Vigna mungo
VMungo1080G0213 Vigna mungo
VMungo1309G0794 Vigna mungo
VMungo1309G2166 Vigna mungo
VMungo1309G2178 Vigna mungo
VMungo1309G3035 Vigna mungo
Zm00001eb122690 Zea mays
Zm00001eb161910 Zea mays
Zm00001eb336850 Zea mays
Zm00001eb345070 Zea mays

User provided reference genes

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