Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p06150 Brassica napus
A02p06160 Brassica napus
A02p26720 Brassica napus
A03p04890 Brassica napus
A05p23730 Brassica napus
A06p36030 Brassica napus
A10p03350 Brassica napus
A10p19660 Brassica napus
Aa31LG11G4480 Aethionema arabicum
Aa31LG1G14340 Aethionema arabicum
Aa31LG1G19920 Aethionema arabicum
Aa31LG3G16040 Aethionema arabicum
Aa31LG9G11880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2965 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1242 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2536 Anthoceros agrestis
Actinidia01570 Actinidia chinensis
Actinidia07326 Actinidia chinensis
Actinidia17718 Actinidia chinensis
Actinidia21941 Actinidia chinensis
Actinidia22331 Actinidia chinensis
Actinidia29368 Actinidia chinensis
Ah.09g224290 Amaranthus hybridus
Ah.16g104610 Amaranthus hybridus
Ah.16g104620 Amaranthus hybridus
AL1G14640 Arabidopsis lyrata
AL6G21740 Arabidopsis lyrata
AL6G31830 Arabidopsis lyrata
AL6G43930 Arabidopsis lyrata
Aqoxy2G03904 Aquilegia oxysepala
Aqoxy5G02012 Aquilegia oxysepala
Aqoxy5G03456 Aquilegia oxysepala
Aqoxy7G03622 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B363MR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EEUI5F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K29YM9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QP6CUQ Arachis hypogaea
AT1G04920 Arabidopsis thaliana
AT4G10120 Arabidopsis thaliana
AT5G11110 Arabidopsis thaliana
AT5G20280 Arabidopsis thaliana
ATR0767G134 Amborella trichopoda
ATR1089G065 Amborella trichopoda
Atru.chr13.2574 Acer truncatum
Atru.chr13.2575 Acer truncatum
Atru.chr4.1614 Acer truncatum
Atru.chr7.1963 Acer truncatum
Atru.chr7.2463 Acer truncatum
AUR62011194 Chenopodium quinoa
AUR62012420 Chenopodium quinoa
AUR62013294 Chenopodium quinoa
AUR62031544 Chenopodium quinoa
BcaB01g04699 Brassica carinata
BcaB05g22854 Brassica carinata
BcaB05g23919 Brassica carinata
BcaC03g13748 Brassica carinata
BcaC03g16421 Brassica carinata
BcaC04g19419 Brassica carinata
BcaC04g19420 Brassica carinata
BcaNung02279 Brassica carinata
BcaNung03212 Brassica carinata
BcaNung04974 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01680 Brassica napus
BNapus_Darmor_BZH_scaffold_38p01690 Brassica napus
BolC2t07032H Brassica oleracea
BolC2t10288H Brassica oleracea
BolC3t13071H Brassica oleracea
BolC5t29089H Brassica oleracea
BolC5t32467H Brassica oleracea
BolC7t44783H Brassica oleracea
BolC9t58459H Brassica oleracea
BraA02t05565Z Brassica rapa
BraA02t07675Z Brassica rapa
BraA03t09827Z Brassica rapa
BraA05t21241Z Brassica rapa
BraA06t26525Z Brassica rapa
BraA10t42611Z Brassica rapa
BraA10t44041Z Brassica rapa
C02p42510 Brassica napus
C03p05620 Brassica napus
C05p03070 Brassica napus
C05p37140 Brassica napus
C07p42540 Brassica napus
C09p55920 Brassica napus
CAN.G1333.1 Capsicum annuum
CAN.G1554.1 Capsicum annuum
CANSAT11G0940 Cannabis sativa
CANSAT25G0595 Cannabis sativa
CANSAT78G1683 Cannabis sativa
CARHR004320 Cardamine hirsuta
CARHR149000 Cardamine hirsuta
CARHR149010 Cardamine hirsuta
CARHR192550 Cardamine hirsuta
CARHR202190 Cardamine hirsuta
CARHR261210 Cardamine hirsuta
Carub.0001s0416 Capsella rubella
Carub.0006s0961 Capsella rubella
Carub.0006s1867 Capsella rubella
Carub.0006s2869 Capsella rubella
Ca_06265_v3 Cicer arietinum L.
Ca_06272_v3 Cicer arietinum L.
Ca_13812_v3 Cicer arietinum L.
Ca_14605_v3 Cicer arietinum L.
Ca_21662_v3 Cicer arietinum L.
CBR_g48279 Chara braunii
Cc00_g10250 Coffea canephora
Cc03_g08100 Coffea canephora
Cc06_g07910 Coffea canephora
Cc10_g16060 Coffea canephora
CDE02G2402 Ceratophyllum demersum
CDE05G3453 Ceratophyllum demersum
CDE06G0964 Ceratophyllum demersum
CDE08G0749 Ceratophyllum demersum
Cfa002297 Carpinus fangiana
Cfa008040 Carpinus fangiana
Cfa014946 Carpinus fangiana
Ciclev10004221m.g Citrus clementina
Ciclev10007311m.g Citrus clementina
Ciclev10007312m.g Citrus clementina
Ciclev10018655m.g Citrus clementina
CiPaw.01G118800 Carya illinoinensis
CiPaw.03G012900 Carya illinoinensis
CiPaw.03G249600 Carya illinoinensis
CiPaw.04G176000 Carya illinoinensis
CiPaw.08G010100 Carya illinoinensis
ClCG05G016740 Citrullus lanatus
ClCG06G008030 Citrullus lanatus
ClCG06G011620 Citrullus lanatus
ClCG11G008300 Citrullus lanatus
COL.COLO4_04157 Corchorus olitorius
COL.COLO4_15568 Corchorus olitorius
COL.COLO4_20193 Corchorus olitorius
COL.COLO4_25100 Corchorus olitorius
COL.COLO4_35580 Corchorus olitorius
Cpa.g.c44633 Carica papaya
Cpa.g.sc142.9 Carica papaya
Cpa.g.sc217.19 Carica papaya
Cpa.g.sc46.57 Carica papaya
Cpa.g.sc83.22 Carica papaya
Cre12.g524000 Chlamydomonas reinhardtii
CsaV3_1G027950 Cucumis sativus L.
CsaV3_2G011150 Cucumis sativus L.
CsaV3_2G033300 Cucumis sativus L.
CSS0007008 Camellia sinensis var. sinensis
CSS0009603 Camellia sinensis var. sinensis
CSS0014426 Camellia sinensis var. sinensis
CSS0020276 Camellia sinensis var. sinensis
CSS0024623 Camellia sinensis var. sinensis
CSS0039887 Camellia sinensis var. sinensis
CSS0045450 Camellia sinensis var. sinensis
CSS0047114 Camellia sinensis var. sinensis
DCAR_009328 Daucus carota
DCAR_014063 Daucus carota
DCAR_017776 Daucus carota
DCAR_020891 Daucus carota
DCAR_023866 Daucus carota
DCAR_024461 Daucus carota
Dinv22146 Davidia involucrata
Dinv22147 Davidia involucrata
Dinv36471 Davidia involucrata
Dinv38205 Davidia involucrata
Dinv41465 Davidia involucrata
Duzib150G0022 Durio zibethinus
Duzib151G0735 Durio zibethinus
Duzib168G0415 Durio zibethinus
Duzib168G0810 Durio zibethinus
Duzib177G0796 Durio zibethinus
Duzib187G1979 Durio zibethinus
Duzib212G0455 Durio zibethinus
ECA233G2113 Erigeron canadensis
ECA234G3155 Erigeron canadensis
ECA238G0493 Erigeron canadensis
ECA240G2706 Erigeron canadensis
ECA246G1128 Erigeron canadensis
EL10Ac2g04191 Beta vulgaris
EL10Ac8g18749 Beta vulgaris
Eucgr.C01715 Eucalyptus grandis
Eucgr.E03524 Eucalyptus grandis
Eucgr.E03528 Eucalyptus grandis
Eucgr.F02931 Eucalyptus grandis
Eucgr.H00041 Eucalyptus grandis
FAN01G0170 Fragaria x ananassa
FAN02G1815 Fragaria x ananassa
FAN02G3054 Fragaria x ananassa
FAN02G3256 Fragaria x ananassa
FAN02G3591 Fragaria x ananassa
FAN05G0582 Fragaria x ananassa
FAN05G3860 Fragaria x ananassa
FAN12G3325 Fragaria x ananassa
FAN14G0068 Fragaria x ananassa
FAN14G0491 Fragaria x ananassa
FAN14G0809 Fragaria x ananassa
FAN15G0797 Fragaria x ananassa
FAN17G2454 Fragaria x ananassa
FAN19G0898 Fragaria x ananassa
FAN19G2915 Fragaria x ananassa
FAN20G1163 Fragaria x ananassa
FAN20G1882 Fragaria x ananassa
FAN22G0889 Fragaria x ananassa
FAN23G0699 Fragaria x ananassa
FAN23G1155 Fragaria x ananassa
FAN23G2223 Fragaria x ananassa
FAN24G0647 Fragaria x ananassa
FAN24G1964 Fragaria x ananassa
FAN26G3189 Fragaria x ananassa
FAN27G0316 Fragaria x ananassa
FAN28G2486 Fragaria x ananassa
FvH4_1g02490 Fragaria vesca
FvH4_2g00340 Fragaria vesca
FvH4_2g04943 Fragaria vesca
FvH4_2g28820 Fragaria vesca
FvH4_4g13520 Fragaria vesca
FvH4_6g47971 Fragaria vesca
FvH4_6g47972 Fragaria vesca
FvH4_6g48160 Fragaria vesca
FvH4_6g48814 Fragaria vesca
FvH4_6g48900 Fragaria vesca
Glyma.04G110200 Glycine max
Glyma.06G323700 Glycine max
Glyma.08G308600 Glycine max
Glyma.13G161600 Glycine max
Glyma.14G029100 Glycine max
Glyma.17G109700 Glycine max
Glyma.18G108100 Glycine max
Gohir.A05G248566 Gossypium hirsutum
Gohir.A06G099000 Gossypium hirsutum
Gohir.A08G252700 Gossypium hirsutum
Gohir.A10G126400 Gossypium hirsutum
Gohir.A13G201200 Gossypium hirsutum
Gohir.D05G250700 Gossypium hirsutum
Gohir.D06G101200 Gossypium hirsutum
Gohir.D08G274200 Gossypium hirsutum
Gohir.D08G274300 Gossypium hirsutum
Gohir.D10G140200 Gossypium hirsutum
Gohir.D13G206900 Gossypium hirsutum
Gohir.D13G216633 Gossypium hirsutum
Gorai.004G292800 Gossypium raimondii
Gorai.009G262100 Gossypium raimondii
Gorai.010G116100 Gossypium raimondii
Gorai.011G155900 Gossypium raimondii
Gorai.013G235900 Gossypium raimondii
Gorai.013G247000 Gossypium raimondii
GSVIVG01012825001 Vitis vinifera
GSVIVG01020928001 Vitis vinifera
GSVIVG01034793001 Vitis vinifera
GSVIVG01034794001 Vitis vinifera
GSVIVG01035882001 Vitis vinifera
GSVIVG01037179001 Vitis vinifera
GSVIVG01037186001 Vitis vinifera
HanXRQChr01g0012081 Helianthus annuus
HanXRQChr03g0063181 Helianthus annuus
HanXRQChr05g0150491 Helianthus annuus
HanXRQChr12g0356821 Helianthus annuus
HanXRQChr13g0403281 Helianthus annuus
HanXRQChr15g0488251 Helianthus annuus
Haze_11633 Corylus avellana
Haze_13989 Corylus avellana
Haze_13995 Corylus avellana
Haze_13998 Corylus avellana
Haze_21494 Corylus avellana
Haze_25485 Corylus avellana
Hma1.2p1_0016F.1_g010950 Hydrangea macrophylla
Hma1.2p1_0243F.1_g101030 Hydrangea macrophylla
Hma1.2p1_0243F.1_g101040 Hydrangea macrophylla
Hma1.2p1_1403F.1_g281180 Hydrangea macrophylla
HPP92_001818 Vanilla planifolia
HPP92_006973 Vanilla planifolia
HPP92_006974 Vanilla planifolia
HPP92_023798 Vanilla planifolia
Hund04499 Selenicereus undatus
Hund09293 Selenicereus undatus
Hund25867 Selenicereus undatus
Lalb_Chr04g0248841 Lupinus albus
Lalb_Chr12g0198281 Lupinus albus
Lalb_Chr13g0301461 Lupinus albus
Lj3g0006301 Lotus japonicus
Lj4g0005618 Lotus japonicus
Lj6g0001728 Lotus japonicus
Lj7C436G14 Lonicera japonica
Lj8C723T4 Lonicera japonica
Lj9C695G10 Lonicera japonica
LjContig00049g0021805 Lotus japonicus
Lsat_1_v5_gn_2_46361 Lactuca sativa
Lsat_1_v5_gn_5_118800 Lactuca sativa
Lsat_1_v5_gn_5_93700 Lactuca sativa
Lsat_1_v5_gn_6_109560 Lactuca sativa
Lsat_1_v5_gn_6_20261 Lactuca sativa
Lsat_1_v5_gn_7_43720 Lactuca sativa
Manes.02G203000 Manihot esculenta
Manes.14G117000 Manihot esculenta
Manes.15G055400 Manihot esculenta
Manes.16G123800 Manihot esculenta
Manes.18G109400 Manihot esculenta
Mapoly0007s0253 Marchantia polymorpha
Mapoly0109s0040 Marchantia polymorpha
MBI03_g07136_MAGBIO Magnolia biondii
MBI03_g07137_MAGBIO Magnolia biondii
MBI03_g39601_MAGBIO Magnolia biondii
MBI03_g47797_MAGBIO Magnolia biondii
MBI11_g07438_MAGBIO Magnolia biondii
MBI14_g32632_MAGBIO Magnolia biondii
MD02G1022300 Malus domestica
MD04G1013500 Malus domestica
MD05G1006400 Malus domestica
MD08G1156900 Malus domestica
MD08G1157000 Malus domestica
MD10G1002300 Malus domestica
MD10G1002400 Malus domestica
MD10G1002500 Malus domestica
MD15G1127900 Malus domestica
MD15G1164900 Malus domestica
Medtr3g047380 Medicago truncatula
Medtr4g115620 Medicago truncatula
Medtr5g091340 Medicago truncatula
MELO3C003715.2 Cucumis melo
MELO3C008101.2 Cucumis melo
MELO3C010300.2 Cucumis melo
MELO3C020357.2 Cucumis melo
MELO3C025824.2 Cucumis melo
Migut.C01396 Erythranthe guttata
Migut.E01808 Erythranthe guttata
Migut.G00726 Erythranthe guttata
Migut.J01204 Erythranthe guttata
MSTRG.26349 Avicennia marina
MSTRG.4234 Avicennia marina
Nitab4.5_0000009g0480 Nicotiana tabacum
Nitab4.5_0000374g0020 Nicotiana tabacum
Nitab4.5_0000401g0120 Nicotiana tabacum
Nitab4.5_0001489g0020 Nicotiana tabacum
Nitab4.5_0001880g0050 Nicotiana tabacum
Nitab4.5_0004664g0020 Nicotiana tabacum
Nitab4.5_0006215g0030 Nicotiana tabacum
Nitab4.5_0010823g0010 Nicotiana tabacum
Nn1g07936 Nelumbo nucifera
Nn2g12133 Nelumbo nucifera
Nn3g19992 Nelumbo nucifera
Nn5g27249 Nelumbo nucifera
Nn8g39576 Nelumbo nucifera
Oeu002298.1 Olea europaea
Oeu002913.1 Olea europaea
Oeu043450.1 Olea europaea
Oeu043452.1 Olea europaea
Oeu051861.1 Olea europaea
Oeu051862.1 Olea europaea
Oeu052755.2 Olea europaea
Oeu056960.1 Olea europaea
Oeu063462.1 Olea europaea
Os01g0919400 Oryza sativa ssp. japonica
Os02g0184400 Oryza sativa ssp. japonica
Os06g0634800 Oryza sativa ssp. japonica
Os06g0643800 Oryza sativa ssp. japonica
Os08g0301500 Oryza sativa ssp. japonica
Os11g0236100 Oryza sativa ssp. japonica
Peaxi162Scf00047g00336 Petunia axillaris
Peaxi162Scf00078g01015 Petunia axillaris
Peaxi162Scf00088g01217 Petunia axillaris
Peaxi162Scf00136g01811 Petunia axillaris
PGR031G1464 Punica granatum
PGR142G0188 Punica granatum
PGR142G2885 Punica granatum
PGSC0003DMG400026428 Solanum tuberosum
PGSC0003DMG400027936 Solanum tuberosum
PGSC0003DMG400029892 Solanum tuberosum
PGSC0003DMG401019060 Solanum tuberosum
PGSC0003DMG402019060 Solanum tuberosum
Phvul.003G170100 Phaseolus vulgaris
Phvul.005G002600 Phaseolus vulgaris
Phvul.006G031700 Phaseolus vulgaris
Potri.001G317600 Populus trichocarpa
Potri.006G064300 Populus trichocarpa
Potri.013G095500 Populus trichocarpa
Potri.017G057800 Populus trichocarpa
Potri.018G025100 Populus trichocarpa
Potri.018G124677 Populus trichocarpa
Potri.T124307 Populus trichocarpa
Pp3c15_24340 Physcomitrium patens
Pp3c9_24289 Physcomitrium patens
Pp3c9_24290 Physcomitrium patens
Pp3c9_25200 Physcomitrium patens
Prupe.1G159700 Prunus persica
Prupe.1G483200 Prunus persica
Prupe.7G249900 Prunus persica
Prupe.8G003700 Prunus persica
Psat2g016640 Pisum sativum
Psat4g035880 Pisum sativum
Psat5g173320 Pisum sativum
PSO017G2821 Papaver somniferum
PSO017G5163 Papaver somniferum
PSO017G6008 Papaver somniferum
PSO063G4373 Papaver somniferum
PSO170G5649 Papaver somniferum
PSO478G0606 Papaver somniferum
PSO782G0445 Papaver somniferum
QL02p021190 Quercus lobata
QL02p021201 Quercus lobata
QL02p090141 Quercus lobata
QL09p001383 Quercus lobata
RcHm_v2.0_Chr1g0368231 Rosa chinensis
RcHm_v2.0_Chr2g0087491 Rosa chinensis
RcHm_v2.0_Chr4g0401661 Rosa chinensis
RcHm_v2.0_Chr4g0401671 Rosa chinensis
RcHm_v2.0_Chr4g0414151 Rosa chinensis
RcHm_v2.0_Chr4g0414271 Rosa chinensis
RcHm_v2.0_Chr5g0028781 Rosa chinensis
RcHm_v2.0_Chr6g0249631 Rosa chinensis
RcHm_v2.0_Chr6g0297571 Rosa chinensis
RcHm_v2.0_Chr7g0223581 Rosa chinensis
RcHm_v2.0_Chr7g0223591 Rosa chinensis
Rhsim01G0060800 Rhododendron simsii
Rhsim02G0172400 Rhododendron simsii
Rhsim02G0203100 Rhododendron simsii
Rhsim13G0116200 Rhododendron simsii
Rhsim13G0116300 Rhododendron simsii
Sabra06G0047000 Salix brachista
Sabra13G0081500 Salix brachista
Sabra17G0050900 Salix brachista
Sabra18G0027700 Salix brachista
Sabra18G0106100 Salix brachista
SalBow1G0037 Salvia bowleyana
SalBow6G2931 Salvia bowleyana
SalBow7G1922 Salvia bowleyana
SalBow8G0399 Salvia bowleyana
SalBow8G1481 Salvia bowleyana
Sc09g0010260 Simmondsia chinensis
Sc19g0007070 Simmondsia chinensis
Sc19g0007270 Simmondsia chinensis
Sc19g0007330 Simmondsia chinensis
Sed0005302 Sechium edule
Sed0005744 Sechium edule
Sed0019285 Sechium edule
Sed0020548 Sechium edule
Sed0027731 Sechium edule
SEGI_03039 Sequoiadendron giganteum
SEGI_19328 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06117 Striga asiatica
SGA_v2.0_scaffold163G37964 Striga asiatica
SGA_v2.0_scaffold33G13438 Striga asiatica
SGA_v2.0_scaffold33G13439 Striga asiatica
SGA_v2.0_scaffold63G21804 Striga asiatica
SMO117G0305 Selaginella moellendorffii
SMO134G0116 Selaginella moellendorffii
SMO356G0286 Selaginella moellendorffii
Solyc07g007790.3 Solanum lycopersicum
Solyc08g042000.3 Solanum lycopersicum
Solyc09g092130.3 Solanum lycopersicum
Solyc11g045110.3 Solanum lycopersicum
Sopen07g001080 Solanum pennellii
Sopen08g012400 Solanum pennellii
Sopen09g035000 Solanum pennellii
Sopen11g020550 Solanum pennellii
Sp1g03760 Schrenkiella parvula
Sp2g22240 Schrenkiella parvula
Sp6g07300 Schrenkiella parvula
Sp6g24130 Schrenkiella parvula
Sp6g32390 Schrenkiella parvula
SpUn0121_0010 Schrenkiella parvula
TAR365G0133 Trochodendron aralioides
TAR365G0458 Trochodendron aralioides
TAR376G1083 Trochodendron aralioides
TAR625G1126 Trochodendron aralioides
TAR636G2983 Trochodendron aralioides
THA.LOC104799636 Tarenaya hassleriana
THA.LOC104801022 Tarenaya hassleriana
THA.LOC104824613 Tarenaya hassleriana
Thecc.04G199100 Theobroma cacao
Thecc.08G168300 Theobroma cacao
Thecc.09G022000 Theobroma cacao
Thecc.09G134200 Theobroma cacao
Thhalv10006639m.g Eutrema salsugineum
Thhalv10012540m.g Eutrema salsugineum
Thhalv10012643m.g Eutrema salsugineum
Thhalv10028384m.g Eutrema salsugineum
TPR.G12608 Trifolium pratense
TPR.G16776 Trifolium pratense
TPR.G7628 Trifolium pratense
TWI34G0533 Tripterygium wilfordii
TWI53G0874 Tripterygium wilfordii
TWI63G0529 Tripterygium wilfordii
TWI63G0781 Tripterygium wilfordii
TWI73G1170 Tripterygium wilfordii
unitig_26.g9804 Utricularia gibba
unitig_37.g13072 Utricularia gibba
unitig_899.g15460 Utricularia gibba
vmacro05541 Vaccinium macrocarpon
vmacro07731 Vaccinium macrocarpon
vmacro11029 Vaccinium macrocarpon
vmacro11187 Vaccinium macrocarpon
VMungo0540G0485 Vigna mungo
VMungo1080G0261 Vigna mungo
VMungo1215G0748 Vigna mungo
Zm00001eb143360 Zea mays
Zm00001eb167910 Zea mays
Zm00001eb177450 Zea mays
Zm00001eb234400 Zea mays
Zm00001eb275240 Zea mays
Zm00001eb364620 Zea mays
Zm00001eb387040 Zea mays

User provided reference genes

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