Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p17670 Brassica napus
A01p17680 Brassica napus
A02p03720 Brassica napus
A02p03740 Brassica napus
A02p34310 Brassica napus
A06p08610 Brassica napus
A06p42200 Brassica napus
A06p42210 Brassica napus
A09p63270 Brassica napus
A09p63290 Brassica napus
A09p63340 Brassica napus
A10p21890 Brassica napus
Aa31LG1G1670 Aethionema arabicum
Actinidia15114 Actinidia chinensis
Actinidia27355 Actinidia chinensis
Actinidia27356 Actinidia chinensis
Actinidia37451 Actinidia chinensis
Ah.02g130300 Amaranthus hybridus
Ah.03g133450 Amaranthus hybridus
Ah.03g133460 Amaranthus hybridus
AL1G24800 Arabidopsis lyrata
AL5G14880 Arabidopsis lyrata
AL5G14890 Arabidopsis lyrata
AL6G27700 Arabidopsis lyrata
AL6G28590 Arabidopsis lyrata
Aqoxy5G03679 Aquilegia oxysepala
Aqoxy5G03680 Aquilegia oxysepala
Aqoxy5G03681 Aquilegia oxysepala
Aqoxy5G03682 Aquilegia oxysepala
Aqoxy5G03683 Aquilegia oxysepala
Aqoxy5G03684 Aquilegia oxysepala
Aqoxy5G03685 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6A53IY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8YK6K6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.91LI84 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C2N6FE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D3SU0L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D801R8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FMUQ9I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J2UCUC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KDN9T4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LE7JU9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PX3JKN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T2VPZC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T87YCG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VT1Y4S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WAWR3F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZIM9DZ Arachis hypogaea
AT1G13130 Arabidopsis thaliana
AT3G26130 Arabidopsis thaliana
AT3G26140 Arabidopsis thaliana
AT5G16700 Arabidopsis thaliana
AT5G17500 Arabidopsis thaliana
Atru.chr11.2176 Acer truncatum
Atru.chr3.2930 Acer truncatum
Atru.chr9.2093 Acer truncatum
Atru.chr9.2094 Acer truncatum
Atru.chr9.2095 Acer truncatum
Atru.chr9.2096 Acer truncatum
AUR62005512 Chenopodium quinoa
AUR62005513 Chenopodium quinoa
AUR62005514 Chenopodium quinoa
AUR62024228 Chenopodium quinoa
AUR62024229 Chenopodium quinoa
AUR62024230 Chenopodium quinoa
BcaB06g26523 Brassica carinata
BcaB07g30235 Brassica carinata
BcaB08g36766 Brassica carinata
BcaB08g36811 Brassica carinata
BcaB08g36814 Brassica carinata
BcaB08g36817 Brassica carinata
BcaB08g36819 Brassica carinata
BcaB08g36821 Brassica carinata
BcaB08g36822 Brassica carinata
BcaB08g36823 Brassica carinata
BcaB08g36826 Brassica carinata
BcaC03g17319 Brassica carinata
BcaC03g18511 Brassica carinata
BcaC04g18783 Brassica carinata
BcaC04g23941 Brassica carinata
BcaC05g25082 Brassica carinata
BcaC06g31084 Brassica carinata
BcaC06g31085 Brassica carinata
BcaC06g33924 Brassica carinata
BcaC06g33925 Brassica carinata
BcaC09g50703 Brassica carinata
BcaC09g50704 Brassica carinata
BcaC09g50708 Brassica carinata
BcaNung02565 Brassica carinata
BolC1t02160H Brassica oleracea
BolC1t02161H Brassica oleracea
BolC1t02166H Brassica oleracea
BolC2t06769H Brassica oleracea
BolC2t11342H Brassica oleracea
BolC5t29766H Brassica oleracea
BolC7t44043H Brassica oleracea
BolC7t44044H Brassica oleracea
BolC8t49211H Brassica oleracea
BolC8t49212H Brassica oleracea
BolC8t52216H Brassica oleracea
BolC9t53237H Brassica oleracea
BolC9t58803H Brassica oleracea
BolC9t58873H Brassica oleracea
BolC9t58875H Brassica oleracea
BraA01t01722Z Brassica rapa
BraA01t01723Z Brassica rapa
BraA01t01724Z Brassica rapa
BraA06t24056Z Brassica rapa
BraA06t27136Z Brassica rapa
BraA06t27137Z Brassica rapa
BraA09t41680Z Brassica rapa
BraA10t44248Z Brassica rapa
BraA10t44312Z Brassica rapa
BraA10t44314Z Brassica rapa
C01p22320 Brassica napus
C01p22330 Brassica napus
C02p08530 Brassica napus
C02p08550 Brassica napus
C02p52670 Brassica napus
C05p10210 Brassica napus
C07p35160 Brassica napus
C07p35170 Brassica napus
C08p15870 Brassica napus
C08p15880 Brassica napus
C08p46770 Brassica napus
C09p03090 Brassica napus
C09p59640 Brassica napus
C09p60410 Brassica napus
C09p60420 Brassica napus
C09p60440 Brassica napus
CAN.G105.12 Capsicum annuum
CAN.G1433.28 Capsicum annuum
CAN.G43.19 Capsicum annuum
CAN.G532.72 Capsicum annuum
CAN.G98.1 Capsicum annuum
CANSAT01G1242 Cannabis sativa
CANSAT01G1718 Cannabis sativa
CANSAT01G2267 Cannabis sativa
CANSAT01G3069 Cannabis sativa
CARHR013500 Cardamine hirsuta
CARHR147150 Cardamine hirsuta
CARHR147160 Cardamine hirsuta
CARHR147170 Cardamine hirsuta
CARHR196490 Cardamine hirsuta
Carub.0001s1287 Capsella rubella
Carub.0005s0405 Capsella rubella
Carub.0005s0406 Capsella rubella
Carub.0006s1491 Capsella rubella
Carub.0006s1573 Capsella rubella
Ca_06811_v3 Cicer arietinum L.
Ca_17789_v3 Cicer arietinum L.
Ca_23683_v3 Cicer arietinum L.
Ca_29550_v3 Cicer arietinum L.
Cc05_g03860 Coffea canephora
Cc08_g15420 Coffea canephora
Cc11_g16050 Coffea canephora
CDE09G0819 Ceratophyllum demersum
Cfa008802 Carpinus fangiana
Cfa009244 Carpinus fangiana
Cfa009245 Carpinus fangiana
Cfa009246 Carpinus fangiana
Cfa026281 Carpinus fangiana
Ciclev10023534m.g Citrus clementina
Ciclev10031098m.g Citrus clementina
CiPaw.05G178300 Carya illinoinensis
CiPaw.05G178400 Carya illinoinensis
CiPaw.05G178500 Carya illinoinensis
CiPaw.05G179200 Carya illinoinensis
CiPaw.06G064700 Carya illinoinensis
ClCG01G002200 Citrullus lanatus
ClCG01G002210 Citrullus lanatus
ClCG01G002220 Citrullus lanatus
ClCG01G002230 Citrullus lanatus
ClCG01G002240 Citrullus lanatus
ClCG01G002250 Citrullus lanatus
ClCG01G005000 Citrullus lanatus
ClCG01G005280 Citrullus lanatus
ClCG02G001010 Citrullus lanatus
ClCG05G026060 Citrullus lanatus
ClCG06G004080 Citrullus lanatus
ClCG06G004090 Citrullus lanatus
ClCG06G004110 Citrullus lanatus
ClCG08G004970 Citrullus lanatus
COL.COLO4_23500 Corchorus olitorius
Cpa.g.sc33.65 Carica papaya
Cpa.g.sc33.66 Carica papaya
Cpa.g.sc33.67 Carica papaya
Cpa.g.sc33.69 Carica papaya
CsaV3_3G017710 Cucumis sativus L.
CsaV3_3G017720 Cucumis sativus L.
CsaV3_5G002300 Cucumis sativus L.
CsaV3_5G002310 Cucumis sativus L.
CsaV3_5G002320 Cucumis sativus L.
CsaV3_5G005260 Cucumis sativus L.
CsaV3_5G005540 Cucumis sativus L.
CsaV3_5G005550 Cucumis sativus L.
CsaV3_5G025530 Cucumis sativus L.
CsaV3_5G025540 Cucumis sativus L.
CsaV3_5G025550 Cucumis sativus L.
CsaV3_5G025560 Cucumis sativus L.
CsaV3_5G030780 Cucumis sativus L.
CsaV3_6G003270 Cucumis sativus L.
CSS0001092 Camellia sinensis var. sinensis
CSS0023113 Camellia sinensis var. sinensis
CSS0025840 Camellia sinensis var. sinensis
CSS0045014 Camellia sinensis var. sinensis
DCAR_004607 Daucus carota
DCAR_005577 Daucus carota
DCAR_008344 Daucus carota
DCAR_010246 Daucus carota
DCAR_026497 Daucus carota
Dinv11042 Davidia involucrata
Dinv37576 Davidia involucrata
Dinv37577 Davidia involucrata
Duzib248G1436 Durio zibethinus
Duzib251G0058 Durio zibethinus
ECA233G3771 Erigeron canadensis
ECA246G2158 Erigeron canadensis
ECA246G5179 Erigeron canadensis
ECA248G0828 Erigeron canadensis
EL10Ac9g21847 Beta vulgaris
EL10As2g23165 Beta vulgaris
EL10As2g23167 Beta vulgaris
Eucgr.B03243 Eucalyptus grandis
Eucgr.D01800 Eucalyptus grandis
Eucgr.D01801 Eucalyptus grandis
Eucgr.H02457 Eucalyptus grandis
Eucgr.H02458 Eucalyptus grandis
Eucgr.H02460 Eucalyptus grandis
Eucgr.H02462 Eucalyptus grandis
Eucgr.H02464 Eucalyptus grandis
FAN07G1932 Fragaria x ananassa
FAN12G2835 Fragaria x ananassa
FAN17G1241 Fragaria x ananassa
FAN22G1448 Fragaria x ananassa
FvH4_4g25340 Fragaria vesca
Glyma.05G173300 Glycine max
Glyma.05G173400 Glycine max
Glyma.07G074001 Glycine max
Glyma.08G060700 Glycine max
Glyma.08G130600 Glycine max
Glyma.08G130700 Glycine max
Glyma.08G242200 Glycine max
Glyma.11G179700 Glycine max
Glyma.18G012900 Glycine max
Gohir.A01G158400 Gossypium hirsutum
Gohir.A04G137300 Gossypium hirsutum
Gohir.D01G152300 Gossypium hirsutum
Gohir.D04G180500 Gossypium hirsutum
Gorai.002G188600 Gossypium raimondii
Gorai.012G173600 Gossypium raimondii
GSVIVG01000573001 Vitis vinifera
GSVIVG01014354001 Vitis vinifera
GSVIVG01014355001 Vitis vinifera
GSVIVG01014357001 Vitis vinifera
GSVIVG01014358001 Vitis vinifera
GSVIVG01014359001 Vitis vinifera
GSVIVG01019433001 Vitis vinifera
GSVIVG01019434001 Vitis vinifera
GSVIVG01019436001 Vitis vinifera
HanXRQChr01g0008041 Helianthus annuus
HanXRQChr03g0086011 Helianthus annuus
HanXRQChr08g0208431 Helianthus annuus
HanXRQChr17g0539871 Helianthus annuus
Haze_11815 Corylus avellana
Haze_12280 Corylus avellana
Haze_12281 Corylus avellana
Hma1.2p1_0815F.1_g222770 Hydrangea macrophylla
HPP92_021406 Vanilla planifolia
HPP92_021441 Vanilla planifolia
HPP92_023082 Vanilla planifolia
HPP92_024232 Vanilla planifolia
HPP92_024248 Vanilla planifolia
HPP92_027102 Vanilla planifolia
Hund25404 Selenicereus undatus
Lalb_Chr02g0159911 Lupinus albus
Lalb_Chr07g0185501 Lupinus albus
Lalb_Chr10g0097251 Lupinus albus
Lalb_Chr23g0277671 Lupinus albus
Lalb_Chr23g0277701 Lupinus albus
Lj1g0026390 Lotus japonicus
Lj2A175T74 Lonicera japonica
Lj3A1061T49 Lonicera japonica
Lj3C1061T7 Lonicera japonica
Lj3g0009636 Lotus japonicus
Lj3g0024387 Lotus japonicus
Lj4g0012004 Lotus japonicus
Lj6C100T1 Lonicera japonica
Lj6g0022921 Lotus japonicus
Lsat_1_v5_gn_3_30141 Lactuca sativa
Lsat_1_v5_gn_6_84820 Lactuca sativa
Lsat_1_v5_gn_7_62020 Lactuca sativa
Lsat_1_v5_gn_8_152900 Lactuca sativa
Manes.01G051515 Manihot esculenta
Manes.02G017635 Manihot esculenta
Manes.13G020800 Manihot esculenta
Mapoly0001s0381 Marchantia polymorpha
Mapoly0108s0050 Marchantia polymorpha
MBI06_g33543_MAGBIO Magnolia biondii
MBI10_g07388_MAGBIO Magnolia biondii
MBI10_g20503_MAGBIO Magnolia biondii
MCO04G347 Micromonas commoda
MD13G1104600 Malus domestica
MD13G1104700 Malus domestica
MD16G1104600 Malus domestica
Medtr3g086450 Medicago truncatula
Medtr4g091610 Medicago truncatula
Medtr5g488355 Medicago truncatula
Medtr7g012530 Medicago truncatula
Medtr7g012540 Medicago truncatula
Medtr7g012780 Medicago truncatula
Medtr7g012840 Medicago truncatula
Medtr7g017520 Medicago truncatula
Medtr8g028430 Medicago truncatula
Medtr8g089665 Medicago truncatula
Medtr8g089750 Medicago truncatula
Medtr8g089775 Medicago truncatula
MELO3C000144.2 Cucumis melo
MELO3C000324.2 Cucumis melo
MELO3C000340.2 Cucumis melo
MELO3C000695.2 Cucumis melo
MELO3C001259.2 Cucumis melo
MELO3C001768.2 Cucumis melo
MELO3C001773.2 Cucumis melo
MELO3C005398.2 Cucumis melo
MELO3C005399.2 Cucumis melo
MELO3C005434.2 Cucumis melo
MELO3C005723.2 Cucumis melo
MELO3C005724.2 Cucumis melo
MELO3C011531.2 Cucumis melo
MELO3C011922.2 Cucumis melo
MELO3C021895.2 Cucumis melo
MELO3C027721.2 Cucumis melo
MELO3C028070.2 Cucumis melo
MELO3C028221.2 Cucumis melo
MELO3C033824.2 Cucumis melo
MELO3C033826.2 Cucumis melo
MELO3C033827.2 Cucumis melo
Migut.A00705 Erythranthe guttata
Migut.A00706 Erythranthe guttata
Migut.A00707 Erythranthe guttata
Migut.A00708 Erythranthe guttata
Migut.K00627 Erythranthe guttata
MSTRG.552 Avicennia marina
Nitab4.5_0000229g0010 Nicotiana tabacum
Nitab4.5_0000966g0050 Nicotiana tabacum
Nitab4.5_0009262g0020 Nicotiana tabacum
Nitab4.5_0009909g0020 Nicotiana tabacum
Nn1g01719 Nelumbo nucifera
Nn1g02584 Nelumbo nucifera
Nn1g05474 Nelumbo nucifera
Nn1g09833 Nelumbo nucifera
Nn3g16655 Nelumbo nucifera
Nn3g16656 Nelumbo nucifera
Nn3g19868 Nelumbo nucifera
Nn4g22545 Nelumbo nucifera
Nn4g22546 Nelumbo nucifera
Nn4g22547 Nelumbo nucifera
Nn4g22549 Nelumbo nucifera
Nn5g27182 Nelumbo nucifera
Nn5g27911 Nelumbo nucifera
Oeu019819.1 Olea europaea
Oeu038647.1 Olea europaea
Oeu059778.2 Olea europaea
Oeu063038.1 Olea europaea
Os02g0596200 Oryza sativa ssp. japonica
Os04g0276300 Oryza sativa ssp. japonica
Os04g0480900 Oryza sativa ssp. japonica
Os04g0481000 Oryza sativa ssp. japonica
Os04g0481200 Oryza sativa ssp. japonica
Peaxi162Scf00074g01619 Petunia axillaris
Peaxi162Scf00117g00007 Petunia axillaris
Peaxi162Scf00128g00541 Petunia axillaris
PGR102G1554 Punica granatum
PGR119G0388 Punica granatum
PGR119G1436 Punica granatum
PGR119G2484 Punica granatum
PGSC0003DMG400009602 Solanum tuberosum
PGSC0003DMG400016965 Solanum tuberosum
PGSC0003DMG400046829 Solanum tuberosum
Phvul.002G220300 Phaseolus vulgaris
Phvul.002G258400 Phaseolus vulgaris
Phvul.002G258500 Phaseolus vulgaris
Phvul.010G095100 Phaseolus vulgaris
Phvul.011G098000 Phaseolus vulgaris
Potri.001G097901 Populus trichocarpa
Potri.008G183400 Populus trichocarpa
Potri.010G049700 Populus trichocarpa
Potri.010G049800 Populus trichocarpa
Pp3c20_13240 Physcomitrium patens
Pp3c8_17170 Physcomitrium patens
Prupe.1G241800 Prunus persica
Psat0s1532g0080 Pisum sativum
Psat3g200720 Pisum sativum
Psat3g200760 Pisum sativum
Psat3g206680 Pisum sativum
Psat3g206720 Pisum sativum
Psat7g059680 Pisum sativum
PSO135G0942 Papaver somniferum
PSO210G2530 Papaver somniferum
PSO210G2879 Papaver somniferum
PSO210G5894 Papaver somniferum
PSO210G6860 Papaver somniferum
PSO478G0025 Papaver somniferum
PSO782G2990 Papaver somniferum
QL02p001636 Quercus lobata
QL02p001640 Quercus lobata
QL03p056484 Quercus lobata
QL03p056505 Quercus lobata
QL03p056520 Quercus lobata
QL03p056526 Quercus lobata
QL03p056546 Quercus lobata
RcHm_v2.0_Chr4g0432641 Rosa chinensis
Rhsim07G0086600 Rhododendron simsii
Rhsim07G0086700 Rhododendron simsii
Sabra08G0139600 Salix brachista
Sabra10G0019600 Salix brachista
Sabra10G0019700 Salix brachista
SalBow1G0382 Salvia bowleyana
SalBow1G1346 Salvia bowleyana
SalBow1G1841 Salvia bowleyana
SalBow1G4502 Salvia bowleyana
SalBow1G5363 Salvia bowleyana
SalBow1G7346 Salvia bowleyana
SalBow2G0850 Salvia bowleyana
Sc04g0009690 Simmondsia chinensis
Sc11g0000850 Simmondsia chinensis
Sed0009373 Sechium edule
Sed0012306 Sechium edule
Sed0013802 Sechium edule
Sed0016239 Sechium edule
Sed0018173 Sechium edule
Sed0021625 Sechium edule
Sed0024348 Sechium edule
Sed0027130 Sechium edule
SEGI_05247 Sequoiadendron giganteum
SEGI_09046 Sequoiadendron giganteum
SEGI_16094 Sequoiadendron giganteum
SEGI_16520 Sequoiadendron giganteum
SEGI_18181 Sequoiadendron giganteum
SEGI_30075 Sequoiadendron giganteum
SEGI_30487 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29581 Striga asiatica
SGA_v2.0_scaffold146G36262 Striga asiatica
SGA_v2.0_scaffold146G36263 Striga asiatica
SGA_v2.0_scaffold173G39123 Striga asiatica
SHI07090 Sapria himalayana
SHI07240 Sapria himalayana
Solyc05g013810.4 Solanum lycopersicum
Solyc08g066810.3 Solanum lycopersicum
Solyc08g081720.4 Solanum lycopersicum
Sopen05g008720 Solanum pennellii
Sopen08g020770 Solanum pennellii
Sopen08g030020 Solanum pennellii
Sp1g11660 Schrenkiella parvula
Sp2g15350 Schrenkiella parvula
Sp2g15360 Schrenkiella parvula
Sp6g00470 Schrenkiella parvula
Sp6g11530 Schrenkiella parvula
Sp6g26720 Schrenkiella parvula
Sp6g27460 Schrenkiella parvula
TAR375G0098 Trochodendron aralioides
TAR375G0997 Trochodendron aralioides
TAR629G2172 Trochodendron aralioides
TAR629G2230 Trochodendron aralioides
THA.LOC104805267 Tarenaya hassleriana
THA.LOC104810759 Tarenaya hassleriana
THA.LOC104811274 Tarenaya hassleriana
THA.LOC104820833 Tarenaya hassleriana
THA.LOC104825675 Tarenaya hassleriana
THA.LOC104825676 Tarenaya hassleriana
Thecc.02G265400 Theobroma cacao
Thhalv10003934m.g Eutrema salsugineum
Thhalv10003968m.g Eutrema salsugineum
Thhalv10007253m.g Eutrema salsugineum
Thhalv10015466m.g Eutrema salsugineum
Thhalv10015581m.g Eutrema salsugineum
TPR.G11305 Trifolium pratense
TPR.G11321 Trifolium pratense
TPR.G1484 Trifolium pratense
TPR.G15387 Trifolium pratense
TPR.G33433 Trifolium pratense
TPR.G4432 Trifolium pratense
TPR.G6217 Trifolium pratense
TWI18G0925 Tripterygium wilfordii
unitig_22.g6424 Utricularia gibba
unitig_32.g11606 Utricularia gibba
unitig_748.g8123 Utricularia gibba
unitig_8.g3146 Utricularia gibba
vmacro13982 Vaccinium macrocarpon
vmacro13983 Vaccinium macrocarpon
vmacro16168 Vaccinium macrocarpon
VMungo0251G0190 Vigna mungo
VMungo0251G1267 Vigna mungo
VMungo0251G3496 Vigna mungo
VMungo0331G0023 Vigna mungo
VMungo1127G0764 Vigna mungo
Zm00001eb079470 Zea mays
Zm00001eb183810 Zea mays
Zm00001eb424990 Zea mays

User provided reference genes

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