Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p43820 Brassica napus
A06p33200 Brassica napus
A07p00560 Brassica napus
A07p07640 Brassica napus
A08p06450 Brassica napus
Aa31LG6G9980 Aethionema arabicum
Aa31LG8G15590 Aethionema arabicum
Aa31LG8G17080 Aethionema arabicum
Aa31LG9G4510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.927 Anthoceros agrestis
Actinidia04755 Actinidia chinensis
Actinidia07411 Actinidia chinensis
Actinidia09428 Actinidia chinensis
Actinidia20098 Actinidia chinensis
Actinidia20380 Actinidia chinensis
Actinidia29543 Actinidia chinensis
Actinidia32676 Actinidia chinensis
Actinidia36554 Actinidia chinensis
Ah.02g122220 Amaranthus hybridus
Ah.09g231040 Amaranthus hybridus
Ah.14g082170 Amaranthus hybridus
AL1G51550 Arabidopsis lyrata
AL3G40200 Arabidopsis lyrata
AL3G47960 Arabidopsis lyrata
AL3G51740 Arabidopsis lyrata
AL7G45300 Arabidopsis lyrata
AL8G23290 Arabidopsis lyrata
Aqoxy5G01650 Aquilegia oxysepala
Aqoxy5G02049 Aquilegia oxysepala
Aqoxy7G01626 Aquilegia oxysepala
Aqoxy7G03845 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4F0L2M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.56AVCI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8F781P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CN2QEI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D3SS41 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JLTQ5Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NDMV8G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QEW08J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZK214A Arachis hypogaea
AT1G43130 Arabidopsis thaliana
AT2G18460 Arabidopsis thaliana
AT2G20120 Arabidopsis thaliana
AT2G20130 Arabidopsis thaliana
ATR0315G063 Amborella trichopoda
ATR0584G275 Amborella trichopoda
ATR0733G257 Amborella trichopoda
Atru.chr13.2061 Acer truncatum
Atru.chr13.491 Acer truncatum
Atru.chr4.670 Acer truncatum
Atru.chr4.674 Acer truncatum
AUR62003160 Chenopodium quinoa
AUR62003635 Chenopodium quinoa
AUR62007980 Chenopodium quinoa
AUR62010968 Chenopodium quinoa
AUR62017945 Chenopodium quinoa
AUR62021478 Chenopodium quinoa
BcaB03g14573 Brassica carinata
BcaB03g16809 Brassica carinata
BcaB04g17622 Brassica carinata
BcaB06g26674 Brassica carinata
BcaB07g31669 Brassica carinata
BcaB08g34835 Brassica carinata
BcaC01g02865 Brassica carinata
BcaC01g03269 Brassica carinata
BcaC06g35741 Brassica carinata
BcaC06g36692 Brassica carinata
BcaC07g37310 Brassica carinata
BolC3t17705H Brassica oleracea
BolC3t18182H Brassica oleracea
BolC7t40538H Brassica oleracea
BolC7t41618H Brassica oleracea
BolC8t47589H Brassica oleracea
BolC9t54294H Brassica oleracea
BraA03t13516Z Brassica rapa
BraA06t26251Z Brassica rapa
BraA07t27852Z Brassica rapa
BraA07t28556Z Brassica rapa
BraA08t32654Z Brassica rapa
C03p54130 Brassica napus
C03p59250 Brassica napus
C07p01010 Brassica napus
C07p11430 Brassica napus
C08p07440 Brassica napus
C09p14000 Brassica napus
CAN.G142.5 Capsicum annuum
CAN.G1529.4 Capsicum annuum
CAN.G1688.1 Capsicum annuum
CAN.G264.11 Capsicum annuum
CAN.G358.102 Capsicum annuum
CANSAT25G0163 Cannabis sativa
CANSAT25G0362 Cannabis sativa
CANSAT56G2094 Cannabis sativa
CARHR035290 Cardamine hirsuta
CARHR100920 Cardamine hirsuta
CARHR109050 Cardamine hirsuta
CARHR110640 Cardamine hirsuta
Carub.0001s3445 Capsella rubella
Carub.0003s2501 Capsella rubella
Carub.0003s3260 Capsella rubella
Carub.0003s3439 Capsella rubella
Ca_13353_v3 Cicer arietinum L.
Ca_16906_v3 Cicer arietinum L.
Ca_17330_v3 Cicer arietinum L.
Ca_17331_v3 Cicer arietinum L.
CBR_g50355 Chara braunii
Cc06_g09820 Coffea canephora
Cc07_g09420 Coffea canephora
Cc07_g16750 Coffea canephora
Cc07_g16760 Coffea canephora
Cc10_g15080 Coffea canephora
CDE02G1993 Ceratophyllum demersum
CDE02G1997 Ceratophyllum demersum
CDE04G1440 Ceratophyllum demersum
CDE04G1915 Ceratophyllum demersum
CDE05G0288 Ceratophyllum demersum
CDE05G2079 Ceratophyllum demersum
CDE06G2304 Ceratophyllum demersum
CDE08G0892 Ceratophyllum demersum
Cfa003242 Carpinus fangiana
Cfa018303 Carpinus fangiana
Ciclev10002223m.g Citrus clementina
Ciclev10009216m.g Citrus clementina
Ciclev10026316m.g Citrus clementina
Ciclev10027148m.g Citrus clementina
CiPaw.03G131000 Carya illinoinensis
CiPaw.03G230100 Carya illinoinensis
CiPaw.04G088400 Carya illinoinensis
CiPaw.04G163100 Carya illinoinensis
CiPaw.15G014300 Carya illinoinensis
ClCG01G015800 Citrullus lanatus
ClCG05G019070 Citrullus lanatus
ClCG06G008690 Citrullus lanatus
ClCG08G002600 Citrullus lanatus
ClCG11G002430 Citrullus lanatus
COL.COLO4_22091 Corchorus olitorius
COL.COLO4_26328 Corchorus olitorius
COL.COLO4_34844 Corchorus olitorius
COL.COLO4_38007 Corchorus olitorius
Cpa.g.sc23.92 Carica papaya
Cpa.g.sc49.97 Carica papaya
Cpa.g.sc6.103 Carica papaya
Cpa.g.sc72.41 Carica papaya
Cre17.g741050 Chlamydomonas reinhardtii
CsaV3_1G024410 Cucumis sativus L.
CsaV3_2G002220 Cucumis sativus L.
CsaV3_3G045040 Cucumis sativus L.
CsaV3_6G002780 Cucumis sativus L.
CsaV3_6G042070 Cucumis sativus L.
CSS0006433 Camellia sinensis var. sinensis
CSS0008351 Camellia sinensis var. sinensis
CSS0013270 Camellia sinensis var. sinensis
CSS0022379 Camellia sinensis var. sinensis
CSS0023197 Camellia sinensis var. sinensis
DCAR_011481 Daucus carota
DCAR_012068 Daucus carota
DCAR_016069 Daucus carota
DCAR_028705 Daucus carota
Dinv04467 Davidia involucrata
Dinv26825 Davidia involucrata
Dinv36646 Davidia involucrata
Dinv39974 Davidia involucrata
Dinv41053 Davidia involucrata
Dinv41617 Davidia involucrata
Duzib041G0098 Durio zibethinus
Duzib041G0338 Durio zibethinus
Duzib093G1391 Durio zibethinus
Duzib147G1563 Durio zibethinus
Duzib150G0807 Durio zibethinus
Duzib168G1338 Durio zibethinus
Duzib187G1070 Durio zibethinus
Duzib187G1528 Durio zibethinus
Duzib264G0114 Durio zibethinus
ECA234G1199 Erigeron canadensis
ECA238G0504 Erigeron canadensis
ECA240G3496 Erigeron canadensis
ECA246G4356 Erigeron canadensis
ECA247G2886 Erigeron canadensis
EL10Ac2g02677 Beta vulgaris
EL10Ac6g14941 Beta vulgaris
EL10Ac6g15239 Beta vulgaris
EL10Ac8g18456 Beta vulgaris
Eucgr.C01032 Eucalyptus grandis
Eucgr.F01562 Eucalyptus grandis
Eucgr.F02692 Eucalyptus grandis
Eucgr.I00289 Eucalyptus grandis
FAN15G1260 Fragaria x ananassa
FAN19G1057 Fragaria x ananassa
FAN19G1854 Fragaria x ananassa
FAN20G3167 Fragaria x ananassa
FAN23G2084 Fragaria x ananassa
FAN24G2457 Fragaria x ananassa
FAN26G2875 Fragaria x ananassa
FAN27G0364 Fragaria x ananassa
FAN27G2913 Fragaria x ananassa
FAN27G3271 Fragaria x ananassa
FAN28G0503 Fragaria x ananassa
FAN28G0767 Fragaria x ananassa
FAN28G3017 Fragaria x ananassa
FvH4_1g04490 Fragaria vesca
FvH4_1g23940 Fragaria vesca
FvH4_1g23950 Fragaria vesca
FvH4_2g13260 Fragaria vesca
FvH4_2g39890 Fragaria vesca
Glyma.04G217200 Glycine max
Glyma.06G148600 Glycine max
Glyma.07G084700 Glycine max
Glyma.09G192200 Glycine max
Glyma.14G075700 Glycine max
Gohir.A05G024100 Gossypium hirsutum
Gohir.A05G259600 Gossypium hirsutum
Gohir.A06G063400 Gossypium hirsutum
Gohir.A07G005800 Gossypium hirsutum
Gohir.A10G082914 Gossypium hirsutum
Gohir.A10G082921 Gossypium hirsutum
Gohir.A10G095101 Gossypium hirsutum
Gohir.A12G087600 Gossypium hirsutum
Gohir.A13G196600 Gossypium hirsutum
Gohir.D01G104250 Gossypium hirsutum
Gohir.D05G025600 Gossypium hirsutum
Gohir.D05G261600 Gossypium hirsutum
Gohir.D06G062100 Gossypium hirsutum
Gohir.D07G006200 Gossypium hirsutum
Gohir.D10G092800 Gossypium hirsutum
Gohir.D10G105400 Gossypium hirsutum
Gohir.D12G092800 Gossypium hirsutum
Gohir.D13G201900 Gossypium hirsutum
Gorai.001G005800 Gossypium raimondii
Gorai.002G128300 Gossypium raimondii
Gorai.008G100400 Gossypium raimondii
Gorai.009G025700 Gossypium raimondii
Gorai.009G273500 Gossypium raimondii
Gorai.010G072300 Gossypium raimondii
Gorai.011G102000 Gossypium raimondii
Gorai.011G115000 Gossypium raimondii
Gorai.013G230800 Gossypium raimondii
GSVIVG01009698001 Vitis vinifera
GSVIVG01015373001 Vitis vinifera
GSVIVG01022280001 Vitis vinifera
HanXRQChr02g0041281 Helianthus annuus
HanXRQChr03g0061841 Helianthus annuus
HanXRQChr09g0239651 Helianthus annuus
HanXRQChr11g0324841 Helianthus annuus
HanXRQChr11g0324851 Helianthus annuus
HanXRQChr12g0355521 Helianthus annuus
HanXRQChr16g0530271 Helianthus annuus
Haze_07268 Corylus avellana
Haze_17788 Corylus avellana
Haze_17978 Corylus avellana
Haze_25089 Corylus avellana
Haze_25762 Corylus avellana
Hma1.2p1_0240F.1_g100450 Hydrangea macrophylla
Hma1.2p1_0717F.1_g208140 Hydrangea macrophylla
Hma1.2p1_1463F.1_g285130 Hydrangea macrophylla
Hma1.2p1_3266F.1_g334705 Hydrangea macrophylla
HPP92_006835 Vanilla planifolia
Hund03502 Selenicereus undatus
Hund09123 Selenicereus undatus
Hund09216 Selenicereus undatus
Hund16588 Selenicereus undatus
Hund26213 Selenicereus undatus
Lalb_Chr05g0222961 Lupinus albus
Lalb_Chr08g0238741 Lupinus albus
Lalb_Chr09g0331271 Lupinus albus
Lalb_Chr11g0068181 Lupinus albus
Lalb_Chr14g0369201 Lupinus albus
Lalb_Chr14g0371571 Lupinus albus
Lalb_Chr22g0355531 Lupinus albus
Lalb_Chr22g0355541 Lupinus albus
Lalb_Chr24g0397551 Lupinus albus
Lj1g0015899 Lotus japonicus
Lj2P584T24 Lonicera japonica
Lj4A200T27 Lonicera japonica
Lj4C41T5 Lonicera japonica
Lj4g0001106 Lotus japonicus
Lj5g0007296 Lotus japonicus
Lj7A377T38 Lonicera japonica
Lj7A652T83 Lonicera japonica
Lsat_1_v5_gn_1_5301 Lactuca sativa
Lsat_1_v5_gn_2_76221 Lactuca sativa
Lsat_1_v5_gn_4_150781 Lactuca sativa
Lsat_1_v5_gn_5_103441 Lactuca sativa
Lsat_1_v5_gn_7_40741 Lactuca sativa
Lsat_1_v5_gn_8_95400 Lactuca sativa
Manes.02G092900 Manihot esculenta
Manes.02G181700 Manihot esculenta
Manes.03G022000 Manihot esculenta
Manes.05G160700 Manihot esculenta
Manes.12G146200 Manihot esculenta
Manes.16G114500 Manihot esculenta
Mapoly0038s0012 Marchantia polymorpha
Mapoly0046s0085 Marchantia polymorpha
MBI01_g39979_MAGBIO Magnolia biondii
MBI04_g19162_MAGBIO Magnolia biondii
MBI16_g36557_MAGBIO Magnolia biondii
MD00G1011600 Malus domestica
MD02G1038300 Malus domestica
MD02G1044400 Malus domestica
MD05G1030200 Malus domestica
MD08G1034800 Malus domestica
MD10G1030700 Malus domestica
MD11G1105500 Malus domestica
MD15G1031600 Malus domestica
MD15G1182700 Malus domestica
MD15G1339500 Malus domestica
Medtr1g022150 Medicago truncatula
Medtr3g095210 Medicago truncatula
Medtr8g103400 Medicago truncatula
Medtr8g103420 Medicago truncatula
MELO3C003847.2 Cucumis melo
MELO3C004560.2 Cucumis melo
MELO3C008018.2 Cucumis melo
MELO3C024626.2 Cucumis melo
MELO3C024990.2 Cucumis melo
Migut.C00975 Erythranthe guttata
Migut.H00999 Erythranthe guttata
Migut.H02464 Erythranthe guttata
Migut.J01151 Erythranthe guttata
MSTRG.19580 Avicennia marina
MSTRG.23291 Avicennia marina
MSTRG.2515 Avicennia marina
MSTRG.25307 Avicennia marina
Nitab4.5_0000434g0130 Nicotiana tabacum
Nitab4.5_0000434g0140 Nicotiana tabacum
Nitab4.5_0001038g0100 Nicotiana tabacum
Nitab4.5_0001466g0020 Nicotiana tabacum
Nitab4.5_0001649g0010 Nicotiana tabacum
Nitab4.5_0001728g0040 Nicotiana tabacum
Nitab4.5_0002577g0080 Nicotiana tabacum
Nitab4.5_0002904g0050 Nicotiana tabacum
Nitab4.5_0006961g0010 Nicotiana tabacum
Nitab4.5_0009314g0030 Nicotiana tabacum
Nn1g05023 Nelumbo nucifera
Nn1g06039 Nelumbo nucifera
Nn2g11709 Nelumbo nucifera
Nn4g23246 Nelumbo nucifera
Nn5g28795 Nelumbo nucifera
Nn5g29577 Nelumbo nucifera
Nn8g39138 Nelumbo nucifera
Oeu007439.1 Olea europaea
Oeu013427.1 Olea europaea
Oeu018438.1 Olea europaea
Oeu046054.1 Olea europaea
Oeu060199.2 Olea europaea
Oeu061435.1 Olea europaea
Oeu064302.1 Olea europaea
Os01g0867900 Oryza sativa ssp. japonica
Os02g0269000 Oryza sativa ssp. japonica
Os05g0437200 Oryza sativa ssp. japonica
Os05g0529000 Oryza sativa ssp. japonica
Os12g0482600 Oryza sativa ssp. japonica
Peaxi162Scf00025g03021 Petunia axillaris
Peaxi162Scf00079g02321 Petunia axillaris
Peaxi162Scf00231g00125 Petunia axillaris
Peaxi162Scf00546g00017 Petunia axillaris
Peaxi162Scf00751g00317 Petunia axillaris
PGR042G3070 Punica granatum
PGR083G0832 Punica granatum
PGR102G1383 Punica granatum
PGR119G0731 Punica granatum
PGSC0003DMG400000309 Solanum tuberosum
PGSC0003DMG400006362 Solanum tuberosum
PGSC0003DMG400006370 Solanum tuberosum
PGSC0003DMG400014905 Solanum tuberosum
PGSC0003DMG402019700 Solanum tuberosum
Phvul.001G015000 Phaseolus vulgaris
Phvul.004G165400 Phaseolus vulgaris
Phvul.004G165500 Phaseolus vulgaris
Phvul.009G115000 Phaseolus vulgaris
Potri.002G065800 Populus trichocarpa
Potri.005G124100 Populus trichocarpa
Potri.005G148000 Populus trichocarpa
Potri.006G158100 Populus trichocarpa
Potri.018G082100 Populus trichocarpa
Pp3c10_4400 Physcomitrium patens
Pp3c10_4410 Physcomitrium patens
Pp3c14_3670 Physcomitrium patens
Pp3c14_3680 Physcomitrium patens
Prupe.1G380400 Prunus persica
Prupe.6G160000 Prunus persica
Prupe.7G232900 Prunus persica
Prupe.8G037100 Prunus persica
Psat4g143000 Pisum sativum
Psat6g006560 Pisum sativum
Psat7g015440 Pisum sativum
PSO210G4994 Papaver somniferum
PSO210G6117 Papaver somniferum
PSO541G4019 Papaver somniferum
PSO541G5463 Papaver somniferum
PSO675G5745 Papaver somniferum
QL02p008450 Quercus lobata
QL02p037646 Quercus lobata
QL02p037661 Quercus lobata
QL02p038621 Quercus lobata
QL02p038636 Quercus lobata
QL06p031258 Quercus lobata
RcHm_v2.0_Chr2g0090091 Rosa chinensis
RcHm_v2.0_Chr2g0120041 Rosa chinensis
RcHm_v2.0_Chr2g0120081 Rosa chinensis
RcHm_v2.0_Chr3g0477331 Rosa chinensis
RcHm_v2.0_Chr5g0047051 Rosa chinensis
RcHm_v2.0_Chr6g0274661 Rosa chinensis
RcHm_v2.0_Chr6g0300911 Rosa chinensis
Rhsim03G0240400 Rhododendron simsii
Rhsim10G0144700 Rhododendron simsii
Rhsim11G0086700 Rhododendron simsii
Sabra02G0052500 Salix brachista
Sabra05G0102000 Salix brachista
Sabra06G0124300 Salix brachista
Sabra18G0069900 Salix brachista
Sabra18G0070000 Salix brachista
SalBow6G0045 Salvia bowleyana
SalBow7G3552 Salvia bowleyana
SalBow8G2421 Salvia bowleyana
Sc03g0000750 Simmondsia chinensis
Sc08g0007480 Simmondsia chinensis
Sc16g0004040 Simmondsia chinensis
Sc18g0001330 Simmondsia chinensis
Sed0001308 Sechium edule
Sed0003763 Sechium edule
Sed0003765 Sechium edule
Sed0004655 Sechium edule
Sed0018734 Sechium edule
Sed0018781 Sechium edule
Sed0023958 Sechium edule
SEGI_20173 Sequoiadendron giganteum
SEGI_30309 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30881 Striga asiatica
SGA_v2.0_scaffold195G40787 Striga asiatica
SGA_v2.0_scaffold276G46637 Striga asiatica
SGA_v2.0_scaffold2G01261 Striga asiatica
SGA_v2.0_scaffold30G12376 Striga asiatica
SGA_v2.0_scaffold51G18775 Striga asiatica
SHI02730 Sapria himalayana
SMO364G0757 Selaginella moellendorffii
Solyc02g085380.3 Solanum lycopersicum
Solyc04g051340.3 Solanum lycopersicum
Solyc04g071710.4 Solanum lycopersicum
Solyc04g071760.3 Solanum lycopersicum
Solyc12g007130.2 Solanum lycopersicum
Sopen02g030070 Solanum pennellii
Sopen04g022740 Solanum pennellii
Sopen04g027690 Solanum pennellii
Sopen04g027730 Solanum pennellii
Sopen12g003120 Solanum pennellii
Sp1g32320 Schrenkiella parvula
Sp3g22390 Schrenkiella parvula
Sp3g31880 Schrenkiella parvula
Sp3g33410 Schrenkiella parvula
TAR381G0766 Trochodendron aralioides
TAR381G1081 Trochodendron aralioides
TAR381G1647 Trochodendron aralioides
TAR383G0619 Trochodendron aralioides
TAR624G0564 Trochodendron aralioides
TAR626G1432 Trochodendron aralioides
TAR636G1233 Trochodendron aralioides
THA.LOC104800342 Tarenaya hassleriana
THA.LOC104804595 Tarenaya hassleriana
THA.LOC104807448 Tarenaya hassleriana
THA.LOC104809107 Tarenaya hassleriana
THA.LOC104814555 Tarenaya hassleriana
THA.LOC104821640 Tarenaya hassleriana
Thecc.01G037100 Theobroma cacao
Thecc.01G117900 Theobroma cacao
Thecc.08G025600 Theobroma cacao
Thecc.08G156000 Theobroma cacao
Thecc.09G108200 Theobroma cacao
Thhalv10002075m.g Eutrema salsugineum
Thhalv10002641m.g Eutrema salsugineum
Thhalv10023122m.g Eutrema salsugineum
TPR.G18729 Trifolium pratense
TPR.G20148 Trifolium pratense
TPR.G23493 Trifolium pratense
TPR.G23505 Trifolium pratense
TPR.G40253 Trifolium pratense
TWI09G0308 Tripterygium wilfordii
TWI31G0825 Tripterygium wilfordii
TWI32G0993 Tripterygium wilfordii
TWI34G1160 Tripterygium wilfordii
TWI53G0972 Tripterygium wilfordii
TWI63G1474 Tripterygium wilfordii
TWI75G1090 Tripterygium wilfordii
unitig_37.g12364 Utricularia gibba
unitig_46.g18045 Utricularia gibba
unitig_46.g18046 Utricularia gibba
unitig_899.g14998 Utricularia gibba
vmacro01483 Vaccinium macrocarpon
vmacro06225 Vaccinium macrocarpon
vmacro12872 Vaccinium macrocarpon
vmacro20711 Vaccinium macrocarpon
VMungo0464G1328 Vigna mungo
VMungo0464G1502 Vigna mungo
VMungo0647G0431 Vigna mungo
VMungo1309G2791 Vigna mungo
Zm00001eb146660 Zea mays
Zm00001eb203800 Zea mays
Zm00001eb237590 Zea mays
Zm00001eb289160 Zea mays
Zm00001eb293370 Zea mays
Zm00001eb348550 Zea mays
Zm00001eb353680 Zea mays
Zm00001eb366660 Zea mays

User provided reference genes

Program Settings