Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18110 Brassica napus
A03p22520 Brassica napus
A03p26120 Brassica napus
A04p30100 Brassica napus
A05p06390 Brassica napus
A06p13380 Brassica napus
A07p38790 Brassica napus
A09p60360 Brassica napus
Aa31LG4G3000 Aethionema arabicum
Aa31LG5G19530 Aethionema arabicum
Aa31LG5G6740 Aethionema arabicum
Aa31LG7G2250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2946 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4920 Anthoceros agrestis
Actinidia13936 Actinidia chinensis
Actinidia26031 Actinidia chinensis
Actinidia32182 Actinidia chinensis
Actinidia38469 Actinidia chinensis
Actinidia39671 Actinidia chinensis
Ah.09g231360 Amaranthus hybridus
Ah.16g103500 Amaranthus hybridus
Ah.16g103510 Amaranthus hybridus
AL1G29740 Arabidopsis lyrata
AL2G32300 Arabidopsis lyrata
AL301U10020 Arabidopsis lyrata
AL3G43790 Arabidopsis lyrata
AL4G24680 Arabidopsis lyrata
AL4G37700 Arabidopsis lyrata
Aqoxy4G02561 Aquilegia oxysepala
Aqoxy5G00528 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.96XRQP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BVS13F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JM3CB8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RCR30R Arachis hypogaea
AT1G17455 Arabidopsis thaliana
AT1G72630 Arabidopsis thaliana
AT2G06255 Arabidopsis thaliana
AT2G29950 Arabidopsis thaliana
AT2G40080 Arabidopsis thaliana
ATR0598G219 Amborella trichopoda
ATR0618G091 Amborella trichopoda
Atru.chr1.3952 Acer truncatum
Atru.chr12.30 Acer truncatum
Atru.chr3.4218 Acer truncatum
Atru.chr7.1673 Acer truncatum
AUR62009009 Chenopodium quinoa
AUR62012246 Chenopodium quinoa
AUR62012247 Chenopodium quinoa
AUR62022877 Chenopodium quinoa
AUR62022878 Chenopodium quinoa
AUR62023293 Chenopodium quinoa
AUR62043979 Chenopodium quinoa
BcaB01g03148 Brassica carinata
BcaB01g03591 Brassica carinata
BcaB02g09055 Brassica carinata
BcaB03g15679 Brassica carinata
BcaB03g15680 Brassica carinata
BcaB05g24767 Brassica carinata
BcaC01g05010 Brassica carinata
BcaC01g05438 Brassica carinata
BcaC01g05439 Brassica carinata
BcaC02g07349 Brassica carinata
BcaC02g07391 Brassica carinata
BcaC08g45699 Brassica carinata
BcaC08g46706 Brassica carinata
BcaNung05463 Brassica carinata
BcaNung07149 Brassica carinata
BolC2t09063H Brassica oleracea
BolC3t15052H Brassica oleracea
BolC3t15463H Brassica oleracea
BolC4t22358H Brassica oleracea
BolC4t22360H Brassica oleracea
BolC4t28279H Brassica oleracea
BolC6t38585H Brassica oleracea
BolC6t39736H Brassica oleracea
BolC8t51934H Brassica oleracea
BraA02t06858Z Brassica rapa
BraA03t11479Z Brassica rapa
BraA03t11827Z Brassica rapa
BraA04t18497Z Brassica rapa
BraA05t19607Z Brassica rapa
BraA06t24490Z Brassica rapa
BraA07t31433Z Brassica rapa
BraA09t41408Z Brassica rapa
C03p26670 Brassica napus
C03p31160 Brassica napus
C04p07360 Brassica napus
C04p07390 Brassica napus
C04p67760 Brassica napus
C05p15860 Brassica napus
C06p34830 Brassica napus
C06p46950 Brassica napus
C08p43850 Brassica napus
CAN.G1368.5 Capsicum annuum
CAN.G1368.6 Capsicum annuum
CAN.G1671.8 Capsicum annuum
CAN.G322.124 Capsicum annuum
CAN.G394.128 Capsicum annuum
CAN.G545.5 Capsicum annuum
CANSAT56G3010 Cannabis sativa
CANSAT56G3086 Cannabis sativa
CARHR018050 Cardamine hirsuta
CARHR065550 Cardamine hirsuta
CARHR103820 Cardamine hirsuta
CARHR123190 Cardamine hirsuta
CARHR135020 Cardamine hirsuta
Carub.0001s1722 Capsella rubella
Carub.0002s1947 Capsella rubella
Carub.0003s2726 Capsella rubella
Carub.0004s1103 Capsella rubella
Carub.0004s2222 Capsella rubella
Ca_15124_v3 Cicer arietinum L.
Ca_21310_v3 Cicer arietinum L.
Ca_23368_v3 Cicer arietinum L.
Ca_26640_v3 Cicer arietinum L.
Cc01_g14200 Coffea canephora
Cc04_g01390 Coffea canephora
Cc06_g11980 Coffea canephora
Cfa001321 Carpinus fangiana
Cfa003024 Carpinus fangiana
Ciclev10017236m.g Citrus clementina
Ciclev10026798m.g Citrus clementina
Ciclev10026810m.g Citrus clementina
Ciclev10029554m.g Citrus clementina
Ciclev10032998m.g Citrus clementina
CiPaw.01G219500 Carya illinoinensis
CiPaw.01G298200 Carya illinoinensis
CiPaw.02G136400 Carya illinoinensis
CiPaw.03G209400 Carya illinoinensis
CiPaw.04G145100 Carya illinoinensis
CiPaw.13G077400 Carya illinoinensis
ClCG03G015230 Citrullus lanatus
ClCG07G004150 Citrullus lanatus
ClCG11G001490 Citrullus lanatus
COL.COLO4_18123 Corchorus olitorius
COL.COLO4_19160 Corchorus olitorius
COL.COLO4_25719 Corchorus olitorius
COL.COLO4_30768 Corchorus olitorius
Cpa.g.sc25.111 Carica papaya
Cpa.g.sc415.2 Carica papaya
Cpa.g.sc554.1 Carica papaya
CsaV3_1G040820 Cucumis sativus L.
CsaV3_2G001220 Cucumis sativus L.
CsaV3_5G010120 Cucumis sativus L.
CSS0005955 Camellia sinensis var. sinensis
CSS0007686 Camellia sinensis var. sinensis
CSS0014699 Camellia sinensis var. sinensis
CSS0018933 Camellia sinensis var. sinensis
CSS0022689 Camellia sinensis var. sinensis
CSS0037246 Camellia sinensis var. sinensis
CSS0048782 Camellia sinensis var. sinensis
CSS0048915 Camellia sinensis var. sinensis
DCAR_011952 Daucus carota
DCAR_024735 Daucus carota
DCAR_028300 Daucus carota
DCAR_028568 Daucus carota
Dinv25574 Davidia involucrata
Dinv28641 Davidia involucrata
Duzib114G0089 Durio zibethinus
Duzib128G1970 Durio zibethinus
Duzib150G0719 Durio zibethinus
Duzib150G0944 Durio zibethinus
Duzib160G0800 Durio zibethinus
Duzib168G1633 Durio zibethinus
Duzib187G0442 Durio zibethinus
Duzib192G0215 Durio zibethinus
Duzib235G1373 Durio zibethinus
ECA232G2755 Erigeron canadensis
ECA233G5144 Erigeron canadensis
ECA240G3018 Erigeron canadensis
EL10Ac2g04825 Beta vulgaris
EL10Ac2g04827 Beta vulgaris
EL10Ac8g19113 Beta vulgaris
Eucgr.C00829 Eucalyptus grandis
Eucgr.C03559 Eucalyptus grandis
Eucgr.J00211 Eucalyptus grandis
Eucgr.J00214 Eucalyptus grandis
Eucgr.J01911 Eucalyptus grandis
Eucgr.J02822 Eucalyptus grandis
FAN01G2007 Fragaria x ananassa
FAN02G0721 Fragaria x ananassa
FAN03G1352 Fragaria x ananassa
FAN05G0391 Fragaria x ananassa
FAN09G4426 Fragaria x ananassa
FAN10G2894 Fragaria x ananassa
FAN14G1123 Fragaria x ananassa
FAN14G4924 Fragaria x ananassa
FAN19G2079 Fragaria x ananassa
FAN23G0694 Fragaria x ananassa
FAN26G1034 Fragaria x ananassa
FAN26G2910 Fragaria x ananassa
FAN28G2278 Fragaria x ananassa
FvH4_1g08320 Fragaria vesca
FvH4_6g34620 Fragaria vesca
FvH4_7g24450 Fragaria vesca
Glyma.07G037300 Glycine max
Glyma.09G067300 Glycine max
Glyma.11G229700 Glycine max
Glyma.13G108600 Glycine max
Glyma.14G059501 Glycine max
Glyma.14G193700 Glycine max
Glyma.15G176300 Glycine max
Glyma.16G006700 Glycine max
Glyma.17G050800 Glycine max
Glyma.18G027500 Glycine max
Gohir.A05G032900 Gossypium hirsutum
Gohir.A05G088700 Gossypium hirsutum
Gohir.A05G140500 Gossypium hirsutum
Gohir.A06G075600 Gossypium hirsutum
Gohir.A06G163700 Gossypium hirsutum
Gohir.A07G014400 Gossypium hirsutum
Gohir.A08G245900 Gossypium hirsutum
Gohir.A10G053100 Gossypium hirsutum
Gohir.A10G236100 Gossypium hirsutum
Gohir.A10G236200 Gossypium hirsutum
Gohir.A13G191500 Gossypium hirsutum
Gohir.D02G137375 Gossypium hirsutum
Gohir.D05G034400 Gossypium hirsutum
Gohir.D05G089700 Gossypium hirsutum
Gohir.D05G142700 Gossypium hirsutum
Gohir.D06G074600 Gossypium hirsutum
Gohir.D06G169600 Gossypium hirsutum
Gohir.D07G014000 Gossypium hirsutum
Gohir.D08G266900 Gossypium hirsutum
Gohir.D10G054900 Gossypium hirsutum
Gohir.D10G247950 Gossypium hirsutum
Gohir.D10G248000 Gossypium hirsutum
Gohir.D13G196900 Gossypium hirsutum
Gorai.001G014800 Gossypium raimondii
Gorai.004G284700 Gossypium raimondii
Gorai.005G153800 Gossypium raimondii
Gorai.009G034800 Gossypium raimondii
Gorai.009G092100 Gossypium raimondii
Gorai.009G146600 Gossypium raimondii
Gorai.010G087000 Gossypium raimondii
Gorai.010G198100 Gossypium raimondii
Gorai.011G058500 Gossypium raimondii
Gorai.011G287700 Gossypium raimondii
Gorai.011G287800 Gossypium raimondii
Gorai.013G225600 Gossypium raimondii
GSVIVG01015108001 Vitis vinifera
GSVIVG01016773001 Vitis vinifera
GSVIVG01032821001 Vitis vinifera
HanXRQChr03g0060141 Helianthus annuus
HanXRQChr05g0135771 Helianthus annuus
HanXRQChr09g0261711 Helianthus annuus
HanXRQChr09g0276971 Helianthus annuus
HanXRQChr10g0319641 Helianthus annuus
HanXRQChr12g0354131 Helianthus annuus
HanXRQChr12g0370481 Helianthus annuus
HanXRQChr14g0452221 Helianthus annuus
HanXRQChr15g0479911 Helianthus annuus
HanXRQChr17g0565451 Helianthus annuus
Haze_16023 Corylus avellana
Haze_25977 Corylus avellana
Hma1.2p1_0169F.1_g074690 Hydrangea macrophylla
Hma1.2p1_0281F.1_g113040 Hydrangea macrophylla
Hma1.2p1_0291F.1_g115160 Hydrangea macrophylla
Hma1.2p1_0797F.1_g219480 Hydrangea macrophylla
Hma1.2p1_1978F.1_g309800 Hydrangea macrophylla
HPP92_007987 Vanilla planifolia
HPP92_023460 Vanilla planifolia
HPP92_023471 Vanilla planifolia
HPP92_024781 Vanilla planifolia
HPP92_027842 Vanilla planifolia
Hund08717 Selenicereus undatus
Hund18847 Selenicereus undatus
Hund26006 Selenicereus undatus
Lalb_Chr04g0263431 Lupinus albus
Lalb_Chr07g0181071 Lupinus albus
Lalb_Chr08g0232541 Lupinus albus
Lalb_Chr10g0103321 Lupinus albus
Lalb_Chr10g0103331 Lupinus albus
Lalb_Chr11g0074961 Lupinus albus
Lalb_Chr12g0200061 Lupinus albus
Lalb_Chr17g0346761 Lupinus albus
Lj3g0008416 Lotus japonicus
Lj4g0017277 Lotus japonicus
Lj6g0013028 Lotus japonicus
Lj6g0015093 Lotus japonicus
Lsat_1_v5_gn_4_92901 Lactuca sativa
Lsat_1_v5_gn_5_141721 Lactuca sativa
Lsat_1_v5_gn_7_34980 Lactuca sativa
Lsat_1_v5_gn_8_12161 Lactuca sativa
Manes.01G161400 Manihot esculenta
Manes.03G038900 Manihot esculenta
Manes.07G129600 Manihot esculenta
Manes.10G013000 Manihot esculenta
Manes.11G021100 Manihot esculenta
Manes.16G097100 Manihot esculenta
Mapoly0033s0009 Marchantia polymorpha
MBI05_g05305_MAGBIO Magnolia biondii
MBI13_g11354_MAGBIO Magnolia biondii
MBI13_g47638_MAGBIO Magnolia biondii
MBI19_g11843_MAGBIO Magnolia biondii
MCO03G025 Micromonas commoda
MD01G1152700 Malus domestica
MD02G1087400 Malus domestica
MD09G1184400 Malus domestica
MD11G1074300 Malus domestica
Medtr2g041310 Medicago truncatula
Medtr3g070490 Medicago truncatula
Medtr4g125590 Medicago truncatula
Medtr8g020200 Medicago truncatula
MELO3C004647.2 Cucumis melo
MELO3C015510.2 Cucumis melo
Migut.D00940 Erythranthe guttata
Migut.F01385 Erythranthe guttata
Migut.I01068 Erythranthe guttata
Migut.J00944 Erythranthe guttata
Migut.L01548 Erythranthe guttata
Migut.N00783 Erythranthe guttata
MSTRG.10522 Avicennia marina
MSTRG.19472 Avicennia marina
MSTRG.22550 Avicennia marina
MSTRG.8327 Avicennia marina
MSTRG.9516 Avicennia marina
Nitab4.5_0000024g0140 Nicotiana tabacum
Nitab4.5_0000073g0110 Nicotiana tabacum
Nitab4.5_0000189g0220 Nicotiana tabacum
Nitab4.5_0000517g0020 Nicotiana tabacum
Nitab4.5_0000517g0030 Nicotiana tabacum
Nitab4.5_0000517g0040 Nicotiana tabacum
Nitab4.5_0001171g0080 Nicotiana tabacum
Nitab4.5_0001171g0090 Nicotiana tabacum
Nitab4.5_0001199g0110 Nicotiana tabacum
Nitab4.5_0001488g0100 Nicotiana tabacum
Nitab4.5_0001806g0040 Nicotiana tabacum
Nitab4.5_0001866g0070 Nicotiana tabacum
Nitab4.5_0003931g0050 Nicotiana tabacum
Nitab4.5_0006563g0020 Nicotiana tabacum
Nn2g11503 Nelumbo nucifera
Nn2g12970 Nelumbo nucifera
Nn2g13710 Nelumbo nucifera
Nn6g35600 Nelumbo nucifera
Nn8g38699 Nelumbo nucifera
Oeu000299.1 Olea europaea
Oeu000420.1 Olea europaea
Oeu007564.1 Olea europaea
Oeu010815.1 Olea europaea
Oeu019860.1 Olea europaea
Oeu025166.1 Olea europaea
Oeu029473.1 Olea europaea
Oeu029474.1 Olea europaea
Oeu045535.2 Olea europaea
Oeu049528.1 Olea europaea
Oeu058724.1 Olea europaea
Os03g0410300 Oryza sativa ssp. japonica
Os08g0366200 Oryza sativa ssp. japonica
Peaxi162Scf00540g00424 Petunia axillaris
Peaxi162Scf00540g00425 Petunia axillaris
Peaxi162Scf00724g00066 Petunia axillaris
Peaxi162Scf00825g00022 Petunia axillaris
Peaxi162Scf00825g00024 Petunia axillaris
Peaxi162Scf00825g00233 Petunia axillaris
Peaxi162Scf00826g00022 Petunia axillaris
Peaxi162Scf00928g00033 Petunia axillaris
PGR044G0690 Punica granatum
PGR044G1990 Punica granatum
PGR102G3285 Punica granatum
PGR142G1156 Punica granatum
PGSC0003DMG400001221 Solanum tuberosum
PGSC0003DMG400006620 Solanum tuberosum
PGSC0003DMG400009846 Solanum tuberosum
PGSC0003DMG400011596 Solanum tuberosum
PGSC0003DMG400019570 Solanum tuberosum
PGSC0003DMG400030357 Solanum tuberosum
PGSC0003DMG400039436 Solanum tuberosum
Phvul.001G242900 Phaseolus vulgaris
Phvul.003G132400 Phaseolus vulgaris
Phvul.008G224300 Phaseolus vulgaris
Phvul.008G261200 Phaseolus vulgaris
Phvul.009G228400 Phaseolus vulgaris
Phvul.010G130900 Phaseolus vulgaris
Potri.001G170100 Populus trichocarpa
Potri.001G251600 Populus trichocarpa
Potri.003G063900 Populus trichocarpa
Potri.006G143800 Populus trichocarpa
Potri.008G068200 Populus trichocarpa
Potri.009G046400 Populus trichocarpa
Potri.019G131700 Populus trichocarpa
Pp3c6_6280 Physcomitrium patens
PRCOL_00005870 Prasinoderma coloniale
Prupe.2G249800 Prunus persica
Prupe.3G042600 Prunus persica
Prupe.7G202200 Prunus persica
Psat1g135320 Pisum sativum
Psat4g017320 Pisum sativum
Psat4g182560 Pisum sativum
Psat5g128480 Pisum sativum
PSO210G2303 Papaver somniferum
PSO339G0635 Papaver somniferum
PSO408G0003 Papaver somniferum
PSO832G0284 Papaver somniferum
QL01p038295 Quercus lobata
QL02p060993 Quercus lobata
QL05p007842 Quercus lobata
QL08p063151 Quercus lobata
RcHm_v2.0_Chr1g0370131 Rosa chinensis
RcHm_v2.0_Chr2g0094381 Rosa chinensis
RcHm_v2.0_Chr2g0145141 Rosa chinensis
Rhsim03G0143500 Rhododendron simsii
Rhsim03G0229600 Rhododendron simsii
Rhsim05G0011900 Rhododendron simsii
Rhsim08G0238000 Rhododendron simsii
Rhsim12G0209400 Rhododendron simsii
Sabra01G0141300 Salix brachista
Sabra03G0037500 Salix brachista
Sabra06G0050000 Salix brachista
Sabra06G0112500 Salix brachista
Sabra06G0113800 Salix brachista
Sabra08G0050100 Salix brachista
Sabra09G0033600 Salix brachista
Sabra16G0153000 Salix brachista
Sabra18G0075500 Salix brachista
SalBow2G3152 Salvia bowleyana
SalBow5G4934 Salvia bowleyana
SalBow6G5153 Salvia bowleyana
SalBow7G4278 Salvia bowleyana
Sc08g0008800 Simmondsia chinensis
Sc11g0005070 Simmondsia chinensis
Sc18g0002430 Simmondsia chinensis
Sed0001521 Sechium edule
Sed0002924 Sechium edule
Sed0012484 Sechium edule
Sed0019507 Sechium edule
Sed0027235 Sechium edule
SEGI_02436 Sequoiadendron giganteum
SEGI_17460 Sequoiadendron giganteum
SEGI_20948 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32910 Striga asiatica
SGA_v2.0_scaffold21G09478 Striga asiatica
SGA_v2.0_scaffold4G02062 Striga asiatica
SGA_v2.0_scaffold68G22865 Striga asiatica
SGA_v2.0_scaffold76G25099 Striga asiatica
SGA_v2.0_scaffold91G28090 Striga asiatica
SHI12403 Sapria himalayana
SMO118G0562 Selaginella moellendorffii
SMO228G0187 Selaginella moellendorffii
Solyc06g051660.1 Solanum lycopersicum
Solyc06g051680.1 Solanum lycopersicum
Solyc06g076960.2 Solanum lycopersicum
Solyc07g041340.2 Solanum lycopersicum
Solyc11g028200.1 Solanum lycopersicum
Solyc12g049290.2 Solanum lycopersicum
Sopen06g017630 Solanum pennellii
Sopen06g017640 Solanum pennellii
Sopen06g033360 Solanum pennellii
Sopen07g020740 Solanum pennellii
Sopen12g023770 Solanum pennellii
Sp1g15590 Schrenkiella parvula
Sp4g12510 Schrenkiella parvula
Sp4g22370 Schrenkiella parvula
Sp5g27690 Schrenkiella parvula
TAR369G0688 Trochodendron aralioides
TAR383G0555 Trochodendron aralioides
TAR623G0816 Trochodendron aralioides
TAR624G0638 Trochodendron aralioides
TAR626G0844 Trochodendron aralioides
TAR636G3156 Trochodendron aralioides
TAR669G0002 Trochodendron aralioides
THA.LOC104800737 Tarenaya hassleriana
THA.LOC104810087 Tarenaya hassleriana
THA.LOC104812244 Tarenaya hassleriana
THA.LOC104813955 Tarenaya hassleriana
THA.LOC104815325 Tarenaya hassleriana
THA.LOC104824312 Tarenaya hassleriana
Thecc.06G119000 Theobroma cacao
Thecc.09G080100 Theobroma cacao
Thecc.09G301600 Theobroma cacao
Thecc.10G016800 Theobroma cacao
Thhalv10002780m.g Eutrema salsugineum
Thhalv10002809m.g Eutrema salsugineum
Thhalv10003045m.g Eutrema salsugineum
Thhalv10009148m.g Eutrema salsugineum
Thhalv10017683m.g Eutrema salsugineum
Thhalv10017822m.g Eutrema salsugineum
Thhalv10019317m.g Eutrema salsugineum
TPR.G16236 Trifolium pratense
TPR.G29498 Trifolium pratense
TPR.G32509 Trifolium pratense
TPR.G35129 Trifolium pratense
TPR.G9454 Trifolium pratense
TWI31G0591 Tripterygium wilfordii
TWI31G0643 Tripterygium wilfordii
TWI32G0138 Tripterygium wilfordii
TWI34G1285 Tripterygium wilfordii
TWI53G0515 Tripterygium wilfordii
TWI63G1285 Tripterygium wilfordii
TWI79G0652 Tripterygium wilfordii
unitig_32.g11563 Utricularia gibba
unitig_60.g25676 Utricularia gibba
unitig_699.g19426 Utricularia gibba
unitig_747.g21411 Utricularia gibba
VMungo0331G1750 Vigna mungo
VMungo0647G0082 Vigna mungo
VMungo0647G2438 Vigna mungo
VMungo1215G1206 Vigna mungo
VMungo1309G3108 Vigna mungo
VMungo1383G2559 Vigna mungo
Zm00001eb019700 Zea mays
Zm00001eb166540 Zea mays
Zm00001eb311850 Zea mays
Zm00001eb393000 Zea mays

User provided reference genes

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