Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p29870 Brassica napus
A02p32650 Brassica napus
A02p42920 Brassica napus
A06p43790 Brassica napus
A06p43800 Brassica napus
A09p23810 Brassica napus
Aa31LG2G7820 Aethionema arabicum
Aa31LG2G7830 Aethionema arabicum
Aa31LG4G12330 Aethionema arabicum
Aa31LG5G3920 Aethionema arabicum
Actinidia36588 Actinidia chinensis
Actinidia39325 Actinidia chinensis
AL2G15360 Arabidopsis lyrata
AL4G27280 Arabidopsis lyrata
AL4G27300 Arabidopsis lyrata
AL5G11360 Arabidopsis lyrata
AL5G11370 Arabidopsis lyrata
AL5G11380 Arabidopsis lyrata
AL5G11390 Arabidopsis lyrata
AL5G11400 Arabidopsis lyrata
AL80U10050 Arabidopsis lyrata
AL8G14820 Arabidopsis lyrata
AL8G40800 Arabidopsis lyrata
Aqoxy3G04170 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4H5G59 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6VXG05 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IDU4K1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IS2QLD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UPL4LC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X2H08Z Arachis hypogaea
AT1G61070 Arabidopsis thaliana
AT2G02100 Arabidopsis thaliana
AT2G02120 Arabidopsis thaliana
AT2G02130 Arabidopsis thaliana
AT2G02140 Arabidopsis thaliana
AT2G02147 Arabidopsis thaliana
AT2G31953 Arabidopsis thaliana
AT2G31957 Arabidopsis thaliana
AT5G63660 Arabidopsis thaliana
Atru.chr11.1065 Acer truncatum
Atru.chr11.1068 Acer truncatum
AUR62008322 Chenopodium quinoa
BcaB04g20312 Brassica carinata
BcaB07g29697 Brassica carinata
BcaB07g30354 Brassica carinata
BcaB07g30708 Brassica carinata
BcaB07g30710 Brassica carinata
BcaC03g17116 Brassica carinata
BcaC03g18217 Brassica carinata
BcaC04g21530 Brassica carinata
BcaC06g31249 Brassica carinata
BcaC06g34079 Brassica carinata
BcaC09g49338 Brassica carinata
BolC1t03737H Brassica oleracea
BolC2t11102H Brassica oleracea
BolC2t12358H Brassica oleracea
BolC5t30895H Brassica oleracea
BolC7t43808H Brassica oleracea
BolC9t55933H Brassica oleracea
BraA01t03115Z Brassica rapa
BraA02t08280Z Brassica rapa
BraA02t09214Z Brassica rapa
BraA06t27257Z Brassica rapa
BraA09t37986Z Brassica rapa
C01p37750 Brassica napus
C02p38770 Brassica napus
C02p50240 Brassica napus
C02p62860 Brassica napus
C03p57970 Brassica napus
C05p21990 Brassica napus
C07p32970 Brassica napus
C07p32980 Brassica napus
C09p30680 Brassica napus
CAN.G1126.32 Capsicum annuum
CAN.G1126.33 Capsicum annuum
CAN.G186.35 Capsicum annuum
CAN.G282.87 Capsicum annuum
CAN.G282.88 Capsicum annuum
CAN.G458.12 Capsicum annuum
CAN.G645.10 Capsicum annuum
CAN.G976.1 Capsicum annuum
CAN.G976.2 Capsicum annuum
CAN.G976.3 Capsicum annuum
CAN.G976.4 Capsicum annuum
CAN.G976.6 Capsicum annuum
CANSAT54G0755 Cannabis sativa
CANSAT78G0503 Cannabis sativa
CANSAT78G1068 Cannabis sativa
CARHR052230 Cardamine hirsuta
CARHR125680 Cardamine hirsuta
CARHR144740 Cardamine hirsuta
CARHR144750 Cardamine hirsuta
CARHR144760 Cardamine hirsuta
CARHR144770 Cardamine hirsuta
CARHR144780 Cardamine hirsuta
CARHR144790 Cardamine hirsuta
CARHR144800 Cardamine hirsuta
CARHR277540 Cardamine hirsuta
Carub.0002s0412 Capsella rubella
Carub.0004s1326 Capsella rubella
Carub.0005s0115 Capsella rubella
Carub.0005s0116 Capsella rubella
Carub.0005s0117 Capsella rubella
Carub.0005s0119 Capsella rubella
Carub.0005s0120 Capsella rubella
Carub.0008s2442 Capsella rubella
Ca_17033_v3 Cicer arietinum L.
Cc06_g07880 Coffea canephora
Cc06_g07890 Coffea canephora
Cc11_g07160 Coffea canephora
CDE04G2371 Ceratophyllum demersum
CDE07G0627 Ceratophyllum demersum
Cfa002248 Carpinus fangiana
Ciclev10005867m.g Citrus clementina
Ciclev10006362m.g Citrus clementina
Ciclev10026887m.g Citrus clementina
CiPaw.04G178300 Carya illinoinensis
CiPaw.04G178400 Carya illinoinensis
ClCG02G000130 Citrullus lanatus
COL.COLO4_16172 Corchorus olitorius
COL.COLO4_16210 Corchorus olitorius
COL.COLO4_27530 Corchorus olitorius
Cpa.g.sc138.21 Carica papaya
Cpa.g.sc2.96 Carica papaya
CsaV3_2G019810 Cucumis sativus L.
CSS0006682 Camellia sinensis var. sinensis
CSS0011856 Camellia sinensis var. sinensis
CSS0038401 Camellia sinensis var. sinensis
DCAR_019911 Daucus carota
DCAR_023524 Daucus carota
DCAR_026845 Daucus carota
DCAR_026846 Daucus carota
Dinv00224 Davidia involucrata
Dinv20716 Davidia involucrata
Duzib213G0741 Durio zibethinus
Duzib248G0383 Durio zibethinus
Duzib248G1477 Durio zibethinus
Duzib251G0835 Durio zibethinus
Duzib268G0537 Durio zibethinus
Duzib268G0639 Durio zibethinus
ECA233G3610 Erigeron canadensis
ECA233G4532 Erigeron canadensis
EL10Ac5g10881 Beta vulgaris
EL10Ac5g10882 Beta vulgaris
EL10Ac5g10883 Beta vulgaris
EL10Ac5g10884 Beta vulgaris
EL10Ac5g10885 Beta vulgaris
EL10Ac7g17637 Beta vulgaris
Eucgr.B02619 Eucalyptus grandis
Eucgr.B02620 Eucalyptus grandis
Eucgr.F03380 Eucalyptus grandis
Eucgr.H05052 Eucalyptus grandis
FAN04G0442 Fragaria x ananassa
FAN07G0709 Fragaria x ananassa
FAN08G1943 Fragaria x ananassa
FAN11G1290 Fragaria x ananassa
FAN16G1567 Fragaria x ananassa
FAN16G3227 Fragaria x ananassa
FAN16G3645 Fragaria x ananassa
FAN18G0803 Fragaria x ananassa
FAN19G2445 Fragaria x ananassa
FAN21G3240 Fragaria x ananassa
FAN22G0227 Fragaria x ananassa
FAN23G2500 Fragaria x ananassa
FAN24G1319 Fragaria x ananassa
FAN25G0202 Fragaria x ananassa
FAN25G0988 Fragaria x ananassa
FAN26G3046 Fragaria x ananassa
FAN28G2126 Fragaria x ananassa
FvH4_1g21320 Fragaria vesca
FvH4_2g25190 Fragaria vesca
FvH4_3g14600 Fragaria vesca
FvH4_3g14620 Fragaria vesca
FvH4_3g40491 Fragaria vesca
FvH4_4g36102 Fragaria vesca
FvH4_4g36104 Fragaria vesca
FvH4_5g33001 Fragaria vesca
Glyma.04G205200 Glycine max
Glyma.05G198000 Glycine max
Glyma.06G160300 Glycine max
Glyma.06G160400 Glycine max
Glyma.08G005300 Glycine max
Glyma.08G268000 Glycine max
Glyma.16G100400 Glycine max
Gohir.A01G033800 Gossypium hirsutum
Gohir.A01G033900 Gossypium hirsutum
Gohir.A01G044800 Gossypium hirsutum
Gohir.A01G044900 Gossypium hirsutum
Gohir.A01G045100 Gossypium hirsutum
Gohir.A01G045200 Gossypium hirsutum
Gohir.A01G045300 Gossypium hirsutum
Gohir.A03G115800 Gossypium hirsutum
Gohir.A03G115938 Gossypium hirsutum
Gohir.A05G375500 Gossypium hirsutum
Gohir.A09G211400 Gossypium hirsutum
Gohir.D01G023520 Gossypium hirsutum
Gohir.D01G023523 Gossypium hirsutum
Gohir.D01G023526 Gossypium hirsutum
Gohir.D01G035700 Gossypium hirsutum
Gohir.D01G035800 Gossypium hirsutum
Gohir.D01G035900 Gossypium hirsutum
Gohir.D01G036000 Gossypium hirsutum
Gohir.D01G036100 Gossypium hirsutum
Gohir.D01G036200 Gossypium hirsutum
Gohir.D02G139400 Gossypium hirsutum
Gohir.D04G040300 Gossypium hirsutum
Gohir.D09G204900 Gossypium hirsutum
Gorai.002G029500 Gossypium raimondii
Gorai.002G029600 Gossypium raimondii
Gorai.002G029700 Gossypium raimondii
Gorai.002G043800 Gossypium raimondii
Gorai.002G043900 Gossypium raimondii
Gorai.002G044000 Gossypium raimondii
Gorai.002G044100 Gossypium raimondii
Gorai.002G044200 Gossypium raimondii
Gorai.005G157500 Gossypium raimondii
Gorai.006G228900 Gossypium raimondii
Gorai.012G045400 Gossypium raimondii
GSVIVG01000230001 Vitis vinifera
GSVIVG01010274001 Vitis vinifera
GSVIVG01036750001 Vitis vinifera
HanXRQChr02g0051881 Helianthus annuus
HanXRQChr03g0065161 Helianthus annuus
HanXRQChr03g0065171 Helianthus annuus
HanXRQChr08g0224941 Helianthus annuus
HanXRQChr12g0365811 Helianthus annuus
HanXRQChr12g0365821 Helianthus annuus
HanXRQChr15g0469151 Helianthus annuus
HanXRQChr17g0533321 Helianthus annuus
HanXRQChr17g0533331 Helianthus annuus
Hma1.2p1_0334F.1_g128480 Hydrangea macrophylla
Hma1.2p1_0383F.1_g140490 Hydrangea macrophylla
Hma1.2p1_0383F.1_g140500 Hydrangea macrophylla
HPP92_013203 Vanilla planifolia
Hund02690 Selenicereus undatus
Hund02692 Selenicereus undatus
Hund09734 Selenicereus undatus
Hund09739 Selenicereus undatus
Hund09741 Selenicereus undatus
Hund18397 Selenicereus undatus
Hund22171 Selenicereus undatus
Lalb_Chr04g0264111 Lupinus albus
Lalb_Chr05g0229081 Lupinus albus
Lalb_Chr05g0230071 Lupinus albus
Lalb_Chr07g0183991 Lupinus albus
Lalb_Chr08g0237751 Lupinus albus
Lalb_Chr11g0068851 Lupinus albus
Lalb_Chr12g0202751 Lupinus albus
Lalb_Chr12g0202761 Lupinus albus
Lalb_Chr12g0206371 Lupinus albus
Lalb_Chr12g0206491 Lupinus albus
Lalb_Chr12g0206501 Lupinus albus
Lalb_Chr12g0206521 Lupinus albus
Lalb_Chr16g0391851 Lupinus albus
Lalb_Chr16g0392501 Lupinus albus
Lalb_Chr16g0392511 Lupinus albus
Lalb_Chr22g0357361 Lupinus albus
Lj1g0008875 Lotus japonicus
Lj1g0011574 Lotus japonicus
Lj4g0007075 Lotus japonicus
Lj4g0025743 Lotus japonicus
Lsat_1_v5_gn_3_27700 Lactuca sativa
Lsat_1_v5_gn_5_70941 Lactuca sativa
Manes.02G163900 Manihot esculenta
Manes.05G122400 Manihot esculenta
Manes.07G074400 Manihot esculenta
Manes.18G077612 Manihot esculenta
Manes.18G077618 Manihot esculenta
MBI06_g26879_MAGBIO Magnolia biondii
MD00G1135500 Malus domestica
MD02G1207600 Malus domestica
MD02G1301000 Malus domestica
MD02G1301100 Malus domestica
MD05G1234500 Malus domestica
MD05G1234800 Malus domestica
MD11G1108400 Malus domestica
MD11G1108800 Malus domestica
MD11G1113600 Malus domestica
MD12G1061400 Malus domestica
MD12G1061700 Malus domestica
MD12G1121400 Malus domestica
MD13G1011400 Malus domestica
MD13G1011500 Malus domestica
MD13G1011600 Malus domestica
MD13G1011700 Malus domestica
MD13G1011800 Malus domestica
MD13G1012000 Malus domestica
MD13G1012100 Malus domestica
MD13G1012200 Malus domestica
MD13G1012400 Malus domestica
MD14G1061400 Malus domestica
MD14G1061900 Malus domestica
MD14G1062000 Malus domestica
MD14G1062100 Malus domestica
MD14G1073000 Malus domestica
MD16G1008800 Malus domestica
MD16G1008900 Malus domestica
MD16G1009000 Malus domestica
MD16G1009100 Malus domestica
Medtr3g032570 Medicago truncatula
Medtr3g097370 Medicago truncatula
Medtr3g097380 Medicago truncatula
Medtr3g097390 Medicago truncatula
Medtr3g097420 Medicago truncatula
Medtr8g070770 Medicago truncatula
Medtr8g070780 Medicago truncatula
Medtr8g070790 Medicago truncatula
Medtr8g075980 Medicago truncatula
Medtr8g095370 Medicago truncatula
Medtr8g095375 Medicago truncatula
MELO3C005214.2 Cucumis melo
MELO3C005215.2 Cucumis melo
MELO3C023203.2 Cucumis melo
Migut.E00474 Erythranthe guttata
Migut.E00475 Erythranthe guttata
Migut.E00476 Erythranthe guttata
Migut.E00478 Erythranthe guttata
Migut.E00740 Erythranthe guttata
Migut.E00742 Erythranthe guttata
Migut.F00873 Erythranthe guttata
Migut.H01661 Erythranthe guttata
Migut.H01662 Erythranthe guttata
Migut.H01663 Erythranthe guttata
Migut.J01199 Erythranthe guttata
Migut.L00621 Erythranthe guttata
Migut.M01514 Erythranthe guttata
Migut.M01515 Erythranthe guttata
Migut.M01516 Erythranthe guttata
Migut.M01517 Erythranthe guttata
MSTRG.13083 Avicennia marina
MSTRG.2131 Avicennia marina
MSTRG.23506 Avicennia marina
Nitab4.5_0000374g0050 Nicotiana tabacum
Nitab4.5_0000374g0060 Nicotiana tabacum
Nitab4.5_0001777g0030 Nicotiana tabacum
Nitab4.5_0001989g0020 Nicotiana tabacum
Nitab4.5_0004431g0020 Nicotiana tabacum
Nitab4.5_0006149g0010 Nicotiana tabacum
Nitab4.5_0007878g0020 Nicotiana tabacum
Nitab4.5_0009181g0010 Nicotiana tabacum
Nn3g18726 Nelumbo nucifera
Nn4g24813 Nelumbo nucifera
Nn7g37876 Nelumbo nucifera
Nn7g38190 Nelumbo nucifera
Nn7g38191 Nelumbo nucifera
Nn7g38192 Nelumbo nucifera
Nn7g38263 Nelumbo nucifera
Oeu059528.1 Olea europaea
Oeu059529.1 Olea europaea
Os01g0932700 Oryza sativa ssp. japonica
Os02g0172000 Oryza sativa ssp. japonica
Os02g0172300 Oryza sativa ssp. japonica
Os02g0212100 Oryza sativa ssp. japonica
Os02g0629800 Oryza sativa ssp. japonica
Os03g0130300 Oryza sativa ssp. japonica
Os04g0189400 Oryza sativa ssp. japonica
Os04g0189800 Oryza sativa ssp. japonica
Os04g0522100 Oryza sativa ssp. japonica
Peaxi162Scf00025g00313 Petunia axillaris
Peaxi162Scf00072g01012 Petunia axillaris
Peaxi162Scf00088g00119 Petunia axillaris
Peaxi162Scf00088g01110 Petunia axillaris
Peaxi162Scf00088g01111 Petunia axillaris
Peaxi162Scf00120g01114 Petunia axillaris
Peaxi162Scf00376g00824 Petunia axillaris
Peaxi162Scf00376g00828 Petunia axillaris
Peaxi162Scf00376g00829 Petunia axillaris
PGR044G1171 Punica granatum
PGR102G0532 Punica granatum
PGSC0003DMG400015129 Solanum tuberosum
PGSC0003DMG400015130 Solanum tuberosum
PGSC0003DMG400015132 Solanum tuberosum
PGSC0003DMG400015133 Solanum tuberosum
PGSC0003DMG400029484 Solanum tuberosum
PGSC0003DMG400030676 Solanum tuberosum
PGSC0003DMG400030677 Solanum tuberosum
PGSC0003DMG400032549 Solanum tuberosum
Phvul.002G278400 Phaseolus vulgaris
Phvul.002G278500 Phaseolus vulgaris
Phvul.002G278600 Phaseolus vulgaris
Phvul.002G278700 Phaseolus vulgaris
Phvul.003G282400 Phaseolus vulgaris
Phvul.003G282500 Phaseolus vulgaris
Phvul.009G158000 Phaseolus vulgaris
Phvul.009G158101 Phaseolus vulgaris
Potri.004G138100 Populus trichocarpa
Potri.T011200 Populus trichocarpa
Potri.T011201 Populus trichocarpa
Potri.T011300 Populus trichocarpa
Potri.T011301 Populus trichocarpa
Prupe.1G201200 Prunus persica
Prupe.1G341500 Prunus persica
Prupe.1G341600 Prunus persica
Prupe.1G341700 Prunus persica
Prupe.4G131400 Prunus persica
Prupe.7G040600 Prunus persica
Prupe.7G070800 Prunus persica
Prupe.7G070900 Prunus persica
Prupe.7G071000 Prunus persica
Prupe.7G071100 Prunus persica
Prupe.7G071200 Prunus persica
Prupe.7G071300 Prunus persica
Prupe.7G071400 Prunus persica
Prupe.7G073300 Prunus persica
Psat4g112000 Pisum sativum
Psat4g112240 Pisum sativum
Psat4g112280 Pisum sativum
Psat4g112360 Pisum sativum
Psat4g112680 Pisum sativum
Psat5g056760 Pisum sativum
Psat5g057240 Pisum sativum
Psat5g057280 Pisum sativum
Psat7g040440 Pisum sativum
Psat7g041040 Pisum sativum
PSO541G0572 Papaver somniferum
PSO541G0662 Papaver somniferum
PSO541G3846 Papaver somniferum
PSO675G5343 Papaver somniferum
PSO675G6539 Papaver somniferum
QL03p041430 Quercus lobata
QL10p038692 Quercus lobata
RcHm_v2.0_Chr2g0115151 Rosa chinensis
RcHm_v2.0_Chr4g0445761 Rosa chinensis
RcHm_v2.0_Chr4g0445781 Rosa chinensis
RcHm_v2.0_Chr4g0445791 Rosa chinensis
RcHm_v2.0_Chr4g0445801 Rosa chinensis
RcHm_v2.0_Chr4g0445851 Rosa chinensis
RcHm_v2.0_Chr5g0024061 Rosa chinensis
RcHm_v2.0_Chr5g0024081 Rosa chinensis
RcHm_v2.0_Chr5g0024091 Rosa chinensis
RcHm_v2.0_Chr7g0227171 Rosa chinensis
RcHm_v2.0_Chr7g0231101 Rosa chinensis
SalBow1G2431 Salvia bowleyana
SalBow1G3487 Salvia bowleyana
SalBow2G2204 Salvia bowleyana
SalBow6G1343 Salvia bowleyana
SalBow6G2289 Salvia bowleyana
SalBow7G0339 Salvia bowleyana
SalBow8G0100 Salvia bowleyana
SalBow8G2012 Salvia bowleyana
SalBow8G2299 Salvia bowleyana
SalBow8G3014 Salvia bowleyana
SalBow8G3771 Salvia bowleyana
SalBow8G5093 Salvia bowleyana
SalBow8G5419 Salvia bowleyana
Sc19g0000440 Simmondsia chinensis
Sc20g0000730 Simmondsia chinensis
Sed0009045 Sechium edule
Sed0017845 Sechium edule
Sed0025601 Sechium edule
SEGI_34828 Sequoiadendron giganteum
SGA_v2.0_scaffold23G10223 Striga asiatica
SGA_v2.0_scaffold23G10229 Striga asiatica
SGA_v2.0_scaffold49G18198 Striga asiatica
SGA_v2.0_scaffold7G03815 Striga asiatica
Solyc04g008470.3 Solanum lycopersicum
Solyc07g007710.4 Solanum lycopersicum
Solyc07g007730.4 Solanum lycopersicum
Solyc07g007735.1 Solanum lycopersicum
Solyc07g007750.3 Solanum lycopersicum
Solyc07g007755.1 Solanum lycopersicum
Solyc11g006260.2 Solanum lycopersicum
Solyc11g006950.3 Solanum lycopersicum
Sopen04g003620 Solanum pennellii
Sopen04g028660 Solanum pennellii
Sopen07g001020 Solanum pennellii
Sopen07g001030 Solanum pennellii
Sopen07g001050 Solanum pennellii
Sopen07g001060 Solanum pennellii
Sopen07g003700 Solanum pennellii
Sopen11g002190 Solanum pennellii
Sopen11g002870 Solanum pennellii
Sp2g13520 Schrenkiella parvula
Sp2g13530 Schrenkiella parvula
Sp2g13540 Schrenkiella parvula
Sp2g13550 Schrenkiella parvula
THA.LOC104818404 Tarenaya hassleriana
THA.LOC109116172 Tarenaya hassleriana
Thecc.02G298100 Theobroma cacao
Thecc.04G140800 Theobroma cacao
Thecc.04G141100 Theobroma cacao
Thecc.04G177500 Theobroma cacao
Thhalv10005228m.g Eutrema salsugineum
Thhalv10005229m.g Eutrema salsugineum
Thhalv10005233m.g Eutrema salsugineum
Thhalv10005235m.g Eutrema salsugineum
Thhalv10017555m.g Eutrema salsugineum
Thhalv10017942m.g Eutrema salsugineum
Thhalv10023787m.g Eutrema salsugineum
TPR.G12848 Trifolium pratense
TPR.G19837 Trifolium pratense
TPR.G29340 Trifolium pratense
TPR.G7787 Trifolium pratense
TWI75G0548 Tripterygium wilfordii
TWI79G1670 Tripterygium wilfordii
unitig_22.g5598 Utricularia gibba
vmacro19741 Vaccinium macrocarpon
VMungo0251G2207 Vigna mungo
VMungo0720G2326 Vigna mungo
VMungo1309G2262 Vigna mungo
Zm00001eb002390 Zea mays
Zm00001eb236940 Zea mays
Zm00001eb247810 Zea mays
Zm00001eb304240 Zea mays

User provided reference genes

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