Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p33620 Brassica napus
A03p42150 Brassica napus
A05p19430 Brassica napus
A06p02310 Brassica napus
A06p13600 Brassica napus
A07p03660 Brassica napus
A08p02570 Brassica napus
A08p30770 Brassica napus
A09p60210 Brassica napus
Aa31LG4G3280 Aethionema arabicum
Aa31LG7G2550 Aethionema arabicum
Aa31LG8G7960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5439 Anthoceros agrestis
Actinidia09021 Actinidia chinensis
Actinidia19333 Actinidia chinensis
Actinidia21746 Actinidia chinensis
Actinidia32137 Actinidia chinensis
Actinidia32138 Actinidia chinensis
Actinidia33081 Actinidia chinensis
Actinidia33082 Actinidia chinensis
Actinidia39121 Actinidia chinensis
Ah.01g004480 Amaranthus hybridus
Ah.10g034460 Amaranthus hybridus
AL1G30070 Arabidopsis lyrata
AL1G59630 Arabidopsis lyrata
AL3G35300 Arabidopsis lyrata
Aqoxy1G00649 Aquilegia oxysepala
Aqoxy3G01115 Aquilegia oxysepala
Aqoxy5G01423 Aquilegia oxysepala
Aqoxy7G01265 Aquilegia oxysepala
Aqoxy7G04072 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4N5DEN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CC6WQ0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D3EF7U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QCSB5K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RX8R7D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T03YFB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4HWHV Arachis hypogaea
AT1G17720 Arabidopsis thaliana
AT1G51690 Arabidopsis thaliana
ATR0225G031 Amborella trichopoda
ATR0789G096 Amborella trichopoda
ATR1152G106 Amborella trichopoda
Atru.chr1.3660 Acer truncatum
Atru.chr7.1039 Acer truncatum
Atru.chr9.2514 Acer truncatum
AUR62009166 Chenopodium quinoa
AUR62022057 Chenopodium quinoa
AUR62023910 Chenopodium quinoa
AUR62038336 Chenopodium quinoa
BcaB02g11272 Brassica carinata
BcaB04g17181 Brassica carinata
BcaB04g17183 Brassica carinata
BcaB04g20597 Brassica carinata
BcaB06g26216 Brassica carinata
BcaB07g33625 Brassica carinata
BcaB07g34027 Brassica carinata
BcaC01g01286 Brassica carinata
BcaC05g25692 Brassica carinata
BcaC06g36143 Brassica carinata
BcaC07g41361 Brassica carinata
BcaC08g43329 Brassica carinata
BcaC08g43932 Brassica carinata
BcaNung05478 Brassica carinata
BolC1t04243H Brassica oleracea
BolC1t04244H Brassica oleracea
BolC3t17443H Brassica oleracea
BolC3t21346H Brassica oleracea
BolC4t25480H Brassica oleracea
BolC5t30312H Brassica oleracea
BolC6t35791H Brassica oleracea
BolC6t36484H Brassica oleracea
BolC7t41149H Brassica oleracea
BolC8t49449H Brassica oleracea
BolC8t51914H Brassica oleracea
BraA01t03474Z Brassica rapa
BraA03t13368Z Brassica rapa
BraA05t20846Z Brassica rapa
BraA06t23438Z Brassica rapa
BraA06t24512Z Brassica rapa
BraA08t32297Z Brassica rapa
BraA08t35008Z Brassica rapa
BraA09t41391Z Brassica rapa
C03p51590 Brassica napus
C03p90240 Brassica napus
C04p39060 Brassica napus
C05p16120 Brassica napus
C06p06850 Brassica napus
C06p13260 Brassica napus
C08p18150 Brassica napus
C08p43670 Brassica napus
CAN.G12.6 Capsicum annuum
CAN.G12.7 Capsicum annuum
CAN.G1668.14 Capsicum annuum
CAN.G2085.2 Capsicum annuum
CAN.G255.15 Capsicum annuum
CAN.G635.16 Capsicum annuum
CANSAT25G0901 Cannabis sativa
CANSAT80G0731 Cannabis sativa
CARHR018330 Cardamine hirsuta
CARHR041850 Cardamine hirsuta
CARHR097170 Cardamine hirsuta
Carub.0001s1745 Capsella rubella
Carub.0001s4056 Capsella rubella
Carub.0003s2125 Capsella rubella
Ca_01184_v3 Cicer arietinum L.
Ca_23302_v3 Cicer arietinum L.
CBR_g31132 Chara braunii
Cc04_g02130 Coffea canephora
Cc04_g12250 Coffea canephora
Cc04_g12260 Coffea canephora
CDE02G0762 Ceratophyllum demersum
CDE04G0693 Ceratophyllum demersum
CDE04G3775 Ceratophyllum demersum
CDE05G2106 Ceratophyllum demersum
CDE05G3128 Ceratophyllum demersum
CDE05G3654 Ceratophyllum demersum
CDE07G0934 Ceratophyllum demersum
Cfa003602 Carpinus fangiana
Cfa019163 Carpinus fangiana
Ciclev10008030m.g Citrus clementina
Ciclev10019821m.g Citrus clementina
Ciclev10025398m.g Citrus clementina
CiPaw.01G226700 Carya illinoinensis
CiPaw.02G141700 Carya illinoinensis
CiPaw.11G023800 Carya illinoinensis
CiPaw.15G040300 Carya illinoinensis
CiPaw.16G029400 Carya illinoinensis
ClCG06G017090 Citrullus lanatus
ClCG07G013650 Citrullus lanatus
ClCG09G000560 Citrullus lanatus
COL.COLO4_21040 Corchorus olitorius
COL.COLO4_30092 Corchorus olitorius
COL.COLO4_30613 Corchorus olitorius
COL.COLO4_30614 Corchorus olitorius
Cpa.g.sc131.38 Carica papaya
Cpa.g.sc254.2 Carica papaya
Cre01.g055420 Chlamydomonas reinhardtii
CsaV3_1G001420 Cucumis sativus L.
CsaV3_3G043980 Cucumis sativus L.
CsaV3_7G034890 Cucumis sativus L.
CSS0003596 Camellia sinensis var. sinensis
CSS0006065 Camellia sinensis var. sinensis
CSS0029431 Camellia sinensis var. sinensis
CSS0050134 Camellia sinensis var. sinensis
DCAR_007613 Daucus carota
DCAR_016170 Daucus carota
DCAR_016171 Daucus carota
DCAR_026155 Daucus carota
DCAR_026376 Daucus carota
Dinv20632 Davidia involucrata
Dinv27975 Davidia involucrata
Dinv30394 Davidia involucrata
Dinv37929 Davidia involucrata
Duzib150G1032 Durio zibethinus
Duzib150G1127 Durio zibethinus
Duzib160G0282 Durio zibethinus
Duzib187G0273 Durio zibethinus
Duzib192G0833 Durio zibethinus
Duzib235G0228 Durio zibethinus
ECA232G0191 Erigeron canadensis
ECA234G3256 Erigeron canadensis
ECA246G2671 Erigeron canadensis
ECA246G5002 Erigeron canadensis
ECA247G2134 Erigeron canadensis
EL10Ac2g03915 Beta vulgaris
EL10Ac9g21105 Beta vulgaris
Eucgr.B00253 Eucalyptus grandis
Eucgr.C00639 Eucalyptus grandis
Eucgr.F03107 Eucalyptus grandis
FAN02G3149 Fragaria x ananassa
FAN04G1215 Fragaria x ananassa
FAN05G0388 Fragaria x ananassa
FAN08G2882 Fragaria x ananassa
FAN09G4252 Fragaria x ananassa
FAN13G3075 Fragaria x ananassa
FAN14G3716 Fragaria x ananassa
FAN15G2318 Fragaria x ananassa
FAN18G0788 Fragaria x ananassa
FAN18G3697 Fragaria x ananassa
FAN20G2473 Fragaria x ananassa
FAN24G2609 Fragaria x ananassa
FAN27G0820 Fragaria x ananassa
FvH4_2g32090 Fragaria vesca
FvH4_5g05510 Fragaria vesca
FvH4_6g33020 Fragaria vesca
Glyma.04G185200 Glycine max
Glyma.07G012000 Glycine max
Glyma.08G195200 Glycine max
Glyma.13G351800 Glycine max
Glyma.14G171400 Glycine max
Glyma.15G022900 Glycine max
Gohir.A02G115900 Gossypium hirsutum
Gohir.A05G043200 Gossypium hirsutum
Gohir.A05G133900 Gossypium hirsutum
Gohir.A05G290032 Gossypium hirsutum
Gohir.A05G364550 Gossypium hirsutum
Gohir.A06G088500 Gossypium hirsutum
Gohir.A07G022124 Gossypium hirsutum
Gohir.A07G113366 Gossypium hirsutum
Gohir.A09G080400 Gossypium hirsutum
Gohir.A10G061900 Gossypium hirsutum
Gohir.A12G273100 Gossypium hirsutum
Gohir.A13G082532 Gossypium hirsutum
Gohir.A13G180850 Gossypium hirsutum
Gohir.D01G081751 Gossypium hirsutum
Gohir.D02G112666 Gossypium hirsutum
Gohir.D03G056900 Gossypium hirsutum
Gohir.D03G107101 Gossypium hirsutum
Gohir.D04G087332 Gossypium hirsutum
Gohir.D04G104900 Gossypium hirsutum
Gohir.D04G162333 Gossypium hirsutum
Gohir.D05G044900 Gossypium hirsutum
Gohir.D05G135900 Gossypium hirsutum
Gohir.D05G231300 Gossypium hirsutum
Gohir.D05G305700 Gossypium hirsutum
Gohir.D05G318366 Gossypium hirsutum
Gohir.D05G338766 Gossypium hirsutum
Gohir.D06G034850 Gossypium hirsutum
Gohir.D06G054450 Gossypium hirsutum
Gohir.D06G088200 Gossypium hirsutum
Gohir.D06G156850 Gossypium hirsutum
Gohir.D07G022700 Gossypium hirsutum
Gohir.D08G259850 Gossypium hirsutum
Gohir.D09G080400 Gossypium hirsutum
Gohir.D10G063500 Gossypium hirsutum
Gohir.D11G045632 Gossypium hirsutum
Gohir.D11G155700 Gossypium hirsutum
Gohir.D12G035800 Gossypium hirsutum
Gohir.D12G036766 Gossypium hirsutum
Gohir.D12G214750 Gossypium hirsutum
Gohir.D12G273800 Gossypium hirsutum
Gohir.D13G109950 Gossypium hirsutum
Gorai.001G023300 Gossypium raimondii
Gorai.002G140200 Gossypium raimondii
Gorai.003G060000 Gossypium raimondii
Gorai.004G173200 Gossypium raimondii
Gorai.006G095900 Gossypium raimondii
Gorai.007G165900 Gossypium raimondii
Gorai.008G148700 Gossypium raimondii
Gorai.008G155800 Gossypium raimondii
Gorai.008G294200 Gossypium raimondii
Gorai.009G046000 Gossypium raimondii
Gorai.009G139900 Gossypium raimondii
Gorai.009G362000 Gossypium raimondii
Gorai.009G408500 Gossypium raimondii
Gorai.010G063600 Gossypium raimondii
Gorai.010G101800 Gossypium raimondii
Gorai.011G067400 Gossypium raimondii
Gorai.011G243600 Gossypium raimondii
Gorai.013G177500 Gossypium raimondii
GSVIVG01007712001 Vitis vinifera
GSVIVG01015238001 Vitis vinifera
GSVIVG01016885001 Vitis vinifera
GSVIVG01035357001 Vitis vinifera
HanXRQChr01g0018271 Helianthus annuus
HanXRQChr02g0031521 Helianthus annuus
HanXRQChr04g0095661 Helianthus annuus
HanXRQChr04g0095761 Helianthus annuus
HanXRQChr05g0139961 Helianthus annuus
HanXRQChr05g0154611 Helianthus annuus
HanXRQChr06g0173821 Helianthus annuus
HanXRQChr09g0276351 Helianthus annuus
HanXRQChr10g0313131 Helianthus annuus
HanXRQChr12g0360731 Helianthus annuus
HanXRQChr14g0444301 Helianthus annuus
Haze_07536 Corylus avellana
Haze_15926 Corylus avellana
Haze_18203 Corylus avellana
Haze_27064 Corylus avellana
Hma1.2p1_0046F.1_g026680 Hydrangea macrophylla
Hma1.2p1_0450F.1_g155590 Hydrangea macrophylla
Hma1.2p1_0679F.1_g202340 Hydrangea macrophylla
HPP92_004561 Vanilla planifolia
HPP92_007615 Vanilla planifolia
HPP92_007616 Vanilla planifolia
HPP92_024434 Vanilla planifolia
Hund00744 Selenicereus undatus
Hund03348 Selenicereus undatus
Hund07665 Selenicereus undatus
Lalb_Chr01g0013351 Lupinus albus
Lalb_Chr14g0367781 Lupinus albus
Lalb_Chr14g0367791 Lupinus albus
Lalb_Chr14g0372861 Lupinus albus
Lalb_Chr22g0351721 Lupinus albus
Lalb_Chr24g0396281 Lupinus albus
Lalb_Chr25g0280581 Lupinus albus
Lj2P3T33 Lonicera japonica
Lj2P662T0 Lonicera japonica
Lj3g0007246 Lotus japonicus
Lj3g0022944 Lotus japonicus
Lj5C126T11 Lonicera japonica
Lj5C48G0 Lonicera japonica
Lj7A279G23 Lonicera japonica
Lj9A517T57 Lonicera japonica
Lsat_1_v5_gn_1_107800 Lactuca sativa
Lsat_1_v5_gn_1_36320 Lactuca sativa
Lsat_1_v5_gn_3_24241 Lactuca sativa
Lsat_1_v5_gn_4_95740 Lactuca sativa
Lsat_1_v5_gn_4_96521 Lactuca sativa
Lsat_1_v5_gn_5_133880 Lactuca sativa
Lsat_1_v5_gn_5_15200 Lactuca sativa
Manes.04G138000 Manihot esculenta
Manes.11G028200 Manihot esculenta
Mapoly0032s0104 Marchantia polymorpha
MBI04_g11705_MAGBIO Magnolia biondii
MBI04_g37935_MAGBIO Magnolia biondii
MBI16_g05478_MAGBIO Magnolia biondii
MBI16_g08577_MAGBIO Magnolia biondii
MCO13G402 Micromonas commoda
MD06G1171900 Malus domestica
MD08G1043800 Malus domestica
MD08G1043900 Malus domestica
MD08G1044000 Malus domestica
MD09G1195400 Malus domestica
MD14G1177400 Malus domestica
MD15G1061300 Malus domestica
MD17G1176000 Malus domestica
Medtr1g040810 Medicago truncatula
Medtr2g100370 Medicago truncatula
Medtr8g015880 Medicago truncatula
MELO3C013044.2 Cucumis melo
MELO3C024401.2 Cucumis melo
MELO3C026288.2 Cucumis melo
Migut.D00977 Erythranthe guttata
Migut.I01006 Erythranthe guttata
Migut.O00119 Erythranthe guttata
MSTRG.10998 Avicennia marina
MSTRG.22602 Avicennia marina
MSTRG.23141 Avicennia marina
MSTRG.4761 Avicennia marina
Nitab4.5_0000003g0700 Nicotiana tabacum
Nitab4.5_0000255g0130 Nicotiana tabacum
Nitab4.5_0001483g0070 Nicotiana tabacum
Nitab4.5_0001967g0060 Nicotiana tabacum
Nitab4.5_0002643g0010 Nicotiana tabacum
Nitab4.5_0003218g0050 Nicotiana tabacum
Nitab4.5_0005816g0020 Nicotiana tabacum
Nitab4.5_0006642g0040 Nicotiana tabacum
Nn4g22698 Nelumbo nucifera
Nn5g29361 Nelumbo nucifera
Nn6g32104 Nelumbo nucifera
Nn6g32112 Nelumbo nucifera
Nn6g35419 Nelumbo nucifera
Nn8g38918 Nelumbo nucifera
Oeu002519.1 Olea europaea
Oeu002554.1 Olea europaea
Oeu004339.2 Olea europaea
Oeu018297.1 Olea europaea
Oeu026737.1 Olea europaea
Oeu039978.2 Olea europaea
Oeu046787.1 Olea europaea
Oeu046788.1 Olea europaea
Oeu052804.1 Olea europaea
Os01g0600200 Oryza sativa ssp. japonica
Os02g0224200 Oryza sativa ssp. japonica
Os02g0617600 Oryza sativa ssp. japonica
Os06g0563300 Oryza sativa ssp. japonica
Peaxi162Scf00038g01329 Petunia axillaris
Peaxi162Scf00132g00233 Petunia axillaris
Peaxi162Scf00177g00218 Petunia axillaris
Peaxi162Scf00207g01130 Petunia axillaris
Peaxi162Scf00689g00117 Petunia axillaris
PGR031G0222 Punica granatum
PGR083G0030 Punica granatum
PGR102G1840 Punica granatum
PGSC0003DMG400002506 Solanum tuberosum
PGSC0003DMG400006741 Solanum tuberosum
PGSC0003DMG401027084 Solanum tuberosum
Phvul.005G161000 Phaseolus vulgaris
Phvul.009G176600 Phaseolus vulgaris
Phvul.010G141300 Phaseolus vulgaris
Potri.001G197300 Populus trichocarpa
Potri.003G034300 Populus trichocarpa
Potri.006G231000 Populus trichocarpa
Potri.015G079300 Populus trichocarpa
Potri.018G055001 Populus trichocarpa
Pp3c11_26160 Physcomitrium patens
Pp3c18_5350 Physcomitrium patens
Pp3c19_12590 Physcomitrium patens
Pp3c21_15900 Physcomitrium patens
Pp3c22_23110 Physcomitrium patens
Pp3c23_20880 Physcomitrium patens
Pp3c23_6990 Physcomitrium patens
Pp3c7_720 Physcomitrium patens
PRCOL_00005409 Prasinoderma coloniale
Prupe.1G414000 Prunus persica
Prupe.3G052100 Prunus persica
Prupe.5G171300 Prunus persica
Psat4g193360 Pisum sativum
Psat5g294160 Pisum sativum
PSO017G2703 Papaver somniferum
PSO063G4191 Papaver somniferum
PSO170G4763 Papaver somniferum
PSO210G1985 Papaver somniferum
PSO210G3705 Papaver somniferum
PSO210G7356 Papaver somniferum
PSO478G3541 Papaver somniferum
PSO832G1874 Papaver somniferum
QL02p001423 Quercus lobata
QL05p015495 Quercus lobata
QL05p015510 Quercus lobata
QL05p016114 Quercus lobata
QL10p010773 Quercus lobata
QL10p010796 Quercus lobata
QL10p010823 Quercus lobata
RcHm_v2.0_Chr2g0142561 Rosa chinensis
RcHm_v2.0_Chr6g0310651 Rosa chinensis
RcHm_v2.0_Chr7g0193311 Rosa chinensis
Rhsim08G0174300 Rhododendron simsii
Rhsim08G0231900 Rhododendron simsii
Rhsim12G0204800 Rhododendron simsii
Sabra01G0156500 Salix brachista
Sabra03G0030200 Salix brachista
Sabra06G0179200 Salix brachista
Sabra15G0103600 Salix brachista
Sabra18G0049600 Salix brachista
SalBow5G3105 Salvia bowleyana
SalBow6G3331 Salvia bowleyana
SalBow7G0448 Salvia bowleyana
Sc10g0007710 Simmondsia chinensis
Sc10g0007730 Simmondsia chinensis
Sc10g0007740 Simmondsia chinensis
Sc12g0009810 Simmondsia chinensis
Sc15g0000050 Simmondsia chinensis
Sed0001292 Sechium edule
Sed0002255 Sechium edule
Sed0008259 Sechium edule
Sed0012592 Sechium edule
Sed0022299 Sechium edule
SEGI_13429 Sequoiadendron giganteum
SEGI_14425 Sequoiadendron giganteum
SEGI_16624 Sequoiadendron giganteum
SEGI_19646 Sequoiadendron giganteum
SEGI_24659 Sequoiadendron giganteum
SGA_v2.0_scaffold116G32231 Striga asiatica
SGA_v2.0_scaffold25G10829 Striga asiatica
SGA_v2.0_scaffold45G16995 Striga asiatica
SGA_v2.0_scaffold4G02037 Striga asiatica
SGA_v2.0_scaffold71G23742 Striga asiatica
SGA_v2.0_scaffold90G27892 Striga asiatica
SHI11191 Sapria himalayana
SMO352G0091 Selaginella moellendorffii
Solyc03g121410.3 Solanum lycopersicum
Solyc06g062530.4 Solanum lycopersicum
Solyc06g071560.3 Solanum lycopersicum
Solyc12g044800.3 Solanum lycopersicum
Sopen03g040220 Solanum pennellii
Sopen06g022010 Solanum pennellii
Sopen06g027850 Solanum pennellii
Sopen12g023170 Solanum pennellii
Sp1g15810 Schrenkiella parvula
Sp1g38330 Schrenkiella parvula
Sp3g19300 Schrenkiella parvula
TAR245G0005 Trochodendron aralioides
TAR381G0130 Trochodendron aralioides
TAR381G0953 Trochodendron aralioides
TAR383G0963 Trochodendron aralioides
TAR622G0336 Trochodendron aralioides
TAR624G0405 Trochodendron aralioides
TAR626G0821 Trochodendron aralioides
TAR636G0841 Trochodendron aralioides
THA.LOC104805916 Tarenaya hassleriana
THA.LOC104812210 Tarenaya hassleriana
THA.LOC104813945 Tarenaya hassleriana
THA.LOC104817931 Tarenaya hassleriana
Thecc.03G015600 Theobroma cacao
Thecc.06G108500 Theobroma cacao
Thecc.09G052300 Theobroma cacao
Thhalv10007406m.g Eutrema salsugineum
Thhalv10011420m.g Eutrema salsugineum
Thhalv10020527m.g Eutrema salsugineum
TPR.G14801 Trifolium pratense
TPR.G18319 Trifolium pratense
TPR.G21531 Trifolium pratense
TPR.G24240 Trifolium pratense
TPR.G39288 Trifolium pratense
TPR.G39312 Trifolium pratense
TPR.G40829 Trifolium pratense
TPR.G6548 Trifolium pratense
TPR.G7427 Trifolium pratense
TWI32G1147 Tripterygium wilfordii
TWI34G0565 Tripterygium wilfordii
TWI34G1104 Tripterygium wilfordii
TWI39G1047 Tripterygium wilfordii
TWI63G0818 Tripterygium wilfordii
TWI63G1248 Tripterygium wilfordii
TWI79G1705 Tripterygium wilfordii
unitig_0.g2870 Utricularia gibba
unitig_0.g2871 Utricularia gibba
unitig_26.g9616 Utricularia gibba
unitig_88.g27596 Utricularia gibba
vmacro16994 Vaccinium macrocarpon
vmacro18817 Vaccinium macrocarpon
vmacro19406 Vaccinium macrocarpon
VMungo0331G1827 Vigna mungo
VMungo1080G1859 Vigna mungo
VMungo1309G1001 Vigna mungo
Zm00001eb161320 Zea mays
Zm00001eb205080 Zea mays
Zm00001eb243780 Zea mays
Zm00001eb247180 Zea mays
Zm00001eb336600 Zea mays
Zm00001eb357700 Zea mays
Zm00001eb384150 Zea mays

User provided reference genes

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