Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30520 Brassica napus
A02p31640 Brassica napus
A06p44700 Brassica napus
A07p38640 Brassica napus
Aa31LG2G8810 Aethionema arabicum
Aa31LG2G9160 Aethionema arabicum
Aa31LG4G2810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.293 Anthoceros agrestis
Actinidia11414 Actinidia chinensis
Actinidia11505 Actinidia chinensis
Actinidia13644 Actinidia chinensis
Actinidia21800 Actinidia chinensis
Actinidia24718 Actinidia chinensis
Actinidia26016 Actinidia chinensis
Actinidia28571 Actinidia chinensis
Actinidia31167 Actinidia chinensis
Actinidia31630 Actinidia chinensis
Actinidia32200 Actinidia chinensis
Actinidia39054 Actinidia chinensis
Ah.02g120400 Amaranthus hybridus
Ah.10g024920 Amaranthus hybridus
Ah.15g089980 Amaranthus hybridus
Ah.15g095200 Amaranthus hybridus
Ah.15g100600 Amaranthus hybridus
AL2G14520 Arabidopsis lyrata
AL2G32170 Arabidopsis lyrata
AL5G10020 Arabidopsis lyrata
Aqoxy1G01257 Aquilegia oxysepala
Aqoxy5G02412 Aquilegia oxysepala
Aqoxy7G04088 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4TG6YL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8FJM7R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G6H680 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GN14J4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7Z1X1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I83RFG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NFL8P1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T94AR1 Arachis hypogaea
AT1G10980 Arabidopsis thaliana
AT1G61670 Arabidopsis thaliana
AT1G72480 Arabidopsis thaliana
AT2G01070 Arabidopsis thaliana
ATR0006G037 Amborella trichopoda
ATR0684G149 Amborella trichopoda
ATR1127G089 Amborella trichopoda
ATR1127G110 Amborella trichopoda
ATR1127G119 Amborella trichopoda
Atru.chr1.4068 Acer truncatum
Atru.chr12.205 Acer truncatum
Atru.chr2.1213 Acer truncatum
Atru.chr6.1088 Acer truncatum
Atru.chr6.1101 Acer truncatum
Atru.chr8.106 Acer truncatum
AUR62001449 Chenopodium quinoa
AUR62003499 Chenopodium quinoa
AUR62006423 Chenopodium quinoa
AUR62009916 Chenopodium quinoa
AUR62017812 Chenopodium quinoa
AUR62029772 Chenopodium quinoa
BcaB02g07373 Brassica carinata
BcaB03g14997 Brassica carinata
BcaB03g15670 Brassica carinata
BcaB04g20356 Brassica carinata
BcaC06g31335 Brassica carinata
BcaC06g34221 Brassica carinata
BcaC08g45706 Brassica carinata
BcaC08g46697 Brassica carinata
BcaC08g46698 Brassica carinata
BolC1t03841H Brassica oleracea
BolC2t10992H Brassica oleracea
BolC6t38594H Brassica oleracea
BolC7t43693H Brassica oleracea
BraA01t03184Z Brassica rapa
BraA02t08167Z Brassica rapa
BraA06t27343Z Brassica rapa
BraA07t31422Z Brassica rapa
C01p38910 Brassica napus
C02p48980 Brassica napus
C06p34950 Brassica napus
C06p46820 Brassica napus
C07p31510 Brassica napus
CAN.G1.64 Capsicum annuum
CAN.G1243.3 Capsicum annuum
CAN.G174.18 Capsicum annuum
CAN.G487.2 Capsicum annuum
CAN.G862.45 Capsicum annuum
CANSAT11G1457 Cannabis sativa
CANSAT56G0153 Cannabis sativa
CANSAT56G2986 Cannabis sativa
CARHR011200 Cardamine hirsuta
CARHR011730 Cardamine hirsuta
CARHR050660 Cardamine hirsuta
CARHR065410 Cardamine hirsuta
CARHR143620 Cardamine hirsuta
CARHR247490 Cardamine hirsuta
Carub.0001s1056 Capsella rubella
Carub.0002s0348 Capsella rubella
Carub.0002s1933 Capsella rubella
Carub.0005s0006 Capsella rubella
Ca_00088_v3 Cicer arietinum L.
Ca_05513_v3 Cicer arietinum L.
Ca_23114_v3 Cicer arietinum L.
Ca_23403_v3 Cicer arietinum L.
Ca_29927_v3 Cicer arietinum L.
CBR_g66668 Chara braunii
Cc02_g05290 Coffea canephora
Cc02_g22300 Coffea canephora
Cc04_g01110 Coffea canephora
CDE05G3081 Ceratophyllum demersum
CDE05G3307 Ceratophyllum demersum
CDE05G3343 Ceratophyllum demersum
CDE06G0307 Ceratophyllum demersum
CDE06G1169 Ceratophyllum demersum
CDE06G2121 Ceratophyllum demersum
CDE06G2714 Ceratophyllum demersum
CDE07G0983 Ceratophyllum demersum
CDE10G1020 Ceratophyllum demersum
Cfa001204 Carpinus fangiana
Cfa003515 Carpinus fangiana
Cfa005543 Carpinus fangiana
Cfa017023 Carpinus fangiana
Ciclev10000891m.g Citrus clementina
Ciclev10011518m.g Citrus clementina
Ciclev10025379m.g Citrus clementina
Ciclev10031177m.g Citrus clementina
CiPaw.01G216500 Carya illinoinensis
CiPaw.06G148600 Carya illinoinensis
CiPaw.09G221900 Carya illinoinensis
ClCG07G005200 Citrullus lanatus
ClCG09G001110 Citrullus lanatus
ClCG10G022790 Citrullus lanatus
ClCG11G015480 Citrullus lanatus
COL.COLO4_08295 Corchorus olitorius
COL.COLO4_10037 Corchorus olitorius
COL.COLO4_17894 Corchorus olitorius
COL.COLO4_30787 Corchorus olitorius
Cpa.g.sc19.48 Carica papaya
Cpa.g.sc2.25 Carica papaya
Cpa.g.sc25.143 Carica papaya
Cpa.g.sc86.61 Carica papaya
CsaV3_4G028610 Cucumis sativus L.
CsaV3_5G011050 Cucumis sativus L.
CsaV3_7G034280 Cucumis sativus L.
CSS0000744 Camellia sinensis var. sinensis
CSS0001533 Camellia sinensis var. sinensis
CSS0001770 Camellia sinensis var. sinensis
CSS0003409 Camellia sinensis var. sinensis
CSS0014521 Camellia sinensis var. sinensis
CSS0015486 Camellia sinensis var. sinensis
CSS0025836 Camellia sinensis var. sinensis
CSS0036266 Camellia sinensis var. sinensis
CSS0041189 Camellia sinensis var. sinensis
CSS0045574 Camellia sinensis var. sinensis
DCAR_005015 Daucus carota
DCAR_007652 Daucus carota
DCAR_023972 Daucus carota
DCAR_027171 Daucus carota
Dinv16972 Davidia involucrata
Dinv19353 Davidia involucrata
Dinv20413 Davidia involucrata
Dinv34493 Davidia involucrata
Dinv37850 Davidia involucrata
Duzib052G0469 Durio zibethinus
Duzib128G0022 Durio zibethinus
Duzib132G0308 Durio zibethinus
Duzib151G0461 Durio zibethinus
Duzib160G0257 Durio zibethinus
Duzib192G0357 Durio zibethinus
Duzib212G0307 Durio zibethinus
Duzib235G0938 Durio zibethinus
Duzib248G0979 Durio zibethinus
ECA233G4951 Erigeron canadensis
ECA234G4534 Erigeron canadensis
ECA247G2716 Erigeron canadensis
EL10Ac3g06114 Beta vulgaris
EL10Ac6g15371 Beta vulgaris
EL10Ac7g16438 Beta vulgaris
EL10Ac7g17109 Beta vulgaris
Eucgr.A00750 Eucalyptus grandis
Eucgr.A00763 Eucalyptus grandis
Eucgr.A00768 Eucalyptus grandis
Eucgr.A00770 Eucalyptus grandis
Eucgr.I02712 Eucalyptus grandis
Eucgr.J00109 Eucalyptus grandis
FAN01G2610 Fragaria x ananassa
FAN02G0018 Fragaria x ananassa
FAN02G0300 Fragaria x ananassa
FAN03G0829 Fragaria x ananassa
FAN04G3095 Fragaria x ananassa
FAN05G4873 Fragaria x ananassa
FAN05G5037 Fragaria x ananassa
FAN05G5434 Fragaria x ananassa
FAN06G2056 Fragaria x ananassa
FAN08G2214 Fragaria x ananassa
FAN09G0498 Fragaria x ananassa
FAN09G3308 Fragaria x ananassa
FAN10G2747 Fragaria x ananassa
FAN13G1081 Fragaria x ananassa
FAN14G1912 Fragaria x ananassa
FAN14G4192 Fragaria x ananassa
FAN18G2890 Fragaria x ananassa
FvH4_5g30110 Fragaria vesca
FvH4_6g09800 Fragaria vesca
FvH4_6g35090 Fragaria vesca
FvH4_7g26010 Fragaria vesca
Glyma.07G041000 Glycine max
Glyma.07G107900 Glycine max
Glyma.08G184400 Glycine max
Glyma.11G160902 Glycine max
Glyma.11G161111 Glycine max
Glyma.15G048300 Glycine max
Glyma.16G009700 Glycine max
Glyma.16G130100 Glycine max
Gohir.A01G177100 Gossypium hirsutum
Gohir.A05G139300 Gossypium hirsutum
Gohir.A05G402400 Gossypium hirsutum
Gohir.A06G023532 Gossypium hirsutum
Gohir.A10G055700 Gossypium hirsutum
Gohir.A10G151400 Gossypium hirsutum
Gohir.A12G218850 Gossypium hirsutum
Gohir.A13G235700 Gossypium hirsutum
Gohir.D01G154950 Gossypium hirsutum
Gohir.D01G168000 Gossypium hirsutum
Gohir.D02G045750 Gossypium hirsutum
Gohir.D03G104666 Gossypium hirsutum
Gohir.D04G013033 Gossypium hirsutum
Gohir.D04G013100 Gossypium hirsutum
Gohir.D05G141500 Gossypium hirsutum
Gohir.D05G288101 Gossypium hirsutum
Gohir.D06G097750 Gossypium hirsutum
Gohir.D07G191850 Gossypium hirsutum
Gohir.D10G057600 Gossypium hirsutum
Gohir.D10G115000 Gossypium hirsutum
Gohir.D13G126332 Gossypium hirsutum
Gohir.D13G241400 Gossypium hirsutum
Gorai.002G208600 Gossypium raimondii
Gorai.003G068800 Gossypium raimondii
Gorai.008G028400 Gossypium raimondii
Gorai.009G145600 Gossypium raimondii
Gorai.011G061700 Gossypium raimondii
Gorai.011G126700 Gossypium raimondii
Gorai.012G015400 Gossypium raimondii
Gorai.013G074700 Gossypium raimondii
Gorai.013G272300 Gossypium raimondii
GSVIVG01011290001 Vitis vinifera
GSVIVG01016725001 Vitis vinifera
GSVIVG01023009001 Vitis vinifera
GSVIVG01030176001 Vitis vinifera
GSVIVG01032070001 Vitis vinifera
GSVIVG01032664001 Vitis vinifera
HanXRQChr04g0094371 Helianthus annuus
HanXRQChr04g0125281 Helianthus annuus
HanXRQChr08g0221581 Helianthus annuus
HanXRQChr10g0287411 Helianthus annuus
HanXRQChr10g0290411 Helianthus annuus
Haze_01629 Corylus avellana
Haze_16060 Corylus avellana
Haze_17363 Corylus avellana
Haze_21181 Corylus avellana
Hma1.2p1_0174F.1_g076790 Hydrangea macrophylla
Hma1.2p1_0217F.1_g091940 Hydrangea macrophylla
HPP92_002186 Vanilla planifolia
HPP92_019115 Vanilla planifolia
HPP92_024981 Vanilla planifolia
Hund04331 Selenicereus undatus
Hund18678 Selenicereus undatus
Hund19759 Selenicereus undatus
Lalb_Chr04g0252651 Lupinus albus
Lalb_Chr04g0253691 Lupinus albus
Lalb_Chr10g0101381 Lupinus albus
Lalb_Chr12g0210651 Lupinus albus
Lalb_Chr17g0344701 Lupinus albus
Lalb_Chr18g0060831 Lupinus albus
Lj1A968T59 Lonicera japonica
Lj3C940T12 Lonicera japonica
Lj3g0007080 Lotus japonicus
Lj3g0027692 Lotus japonicus
Lj5A248G71 Lonicera japonica
Lj5C249T0 Lonicera japonica
Lj5C249T1 Lonicera japonica
Lj6g0013521 Lotus japonicus
Lj8A53G90 Lonicera japonica
Lj9A308G29 Lonicera japonica
Lj9C534T4 Lonicera japonica
LjContig00408g0006549 Lotus japonicus
Lsat_1_v5_gn_1_37881 Lactuca sativa
Lsat_1_v5_gn_5_109440 Lactuca sativa
Lsat_1_v5_gn_8_11421 Lactuca sativa
Lsat_1_v5_gn_9_38720 Lactuca sativa
Manes.04G147600 Manihot esculenta
Manes.07G013900 Manihot esculenta
Manes.08G170700 Manihot esculenta
Manes.09G118500 Manihot esculenta
Manes.10G001900 Manihot esculenta
Manes.10G131800 Manihot esculenta
Manes.11G017000 Manihot esculenta
Mapoly0033s0030 Marchantia polymorpha
Mapoly0076s0018 Marchantia polymorpha
MBI03_g05801_MAGBIO Magnolia biondii
MBI03_g11146_MAGBIO Magnolia biondii
MBI13_g00699_MAGBIO Magnolia biondii
MBI13_g47249_MAGBIO Magnolia biondii
MBI19_g05292_MAGBIO Magnolia biondii
MCO08G097 Micromonas commoda
MD01G1168400 Malus domestica
MD07G1234400 Malus domestica
MD08G1225000 Malus domestica
MD09G1178800 Malus domestica
MD12G1189000 Malus domestica
MD15G1418500 Malus domestica
MD17G1164600 Malus domestica
Medtr2g007740 Medicago truncatula
Medtr5g067670 Medicago truncatula
Medtr8g005485 Medicago truncatula
Medtr8g005790 Medicago truncatula
Medtr8g021310 Medicago truncatula
MELO3C010436.2 Cucumis melo
MELO3C020159.2 Cucumis melo
MELO3C024337.2 Cucumis melo
Migut.D00929 Erythranthe guttata
Migut.F00576 Erythranthe guttata
Migut.I01101 Erythranthe guttata
Migut.N01035 Erythranthe guttata
MSTRG.164 Avicennia marina
MSTRG.22538 Avicennia marina
MSTRG.5237 Avicennia marina
MSTRG.8885 Avicennia marina
MSTRG.9528 Avicennia marina
Nitab4.5_0000078g0440 Nicotiana tabacum
Nitab4.5_0000094g0080 Nicotiana tabacum
Nitab4.5_0001215g0190 Nicotiana tabacum
Nitab4.5_0004322g0040 Nicotiana tabacum
Nitab4.5_0005153g0090 Nicotiana tabacum
Nitab4.5_0006093g0030 Nicotiana tabacum
Nitab4.5_0006232g0030 Nicotiana tabacum
Nitab4.5_0006295g0010 Nicotiana tabacum
Nitab4.5_0008052g0010 Nicotiana tabacum
Nn5g26840 Nelumbo nucifera
Nn5g28070 Nelumbo nucifera
Nn6g35682 Nelumbo nucifera
Nn8g38589 Nelumbo nucifera
Oeu005581.1 Olea europaea
Oeu008878.1 Olea europaea
Oeu012745.1 Olea europaea
Oeu015499.1 Olea europaea
Oeu044919.1 Olea europaea
Oeu063992.2 Olea europaea
Os03g0334800 Oryza sativa ssp. japonica
Os07g0614600 Oryza sativa ssp. japonica
Os09g0439700 Oryza sativa ssp. japonica
Os11g0546100 Oryza sativa ssp. japonica
Peaxi162Scf00003g03826 Petunia axillaris
Peaxi162Scf00038g01949 Petunia axillaris
Peaxi162Scf00068g00074 Petunia axillaris
Peaxi162Scf00304g00622 Petunia axillaris
Peaxi162Scf01238g00008 Petunia axillaris
Peaxi162Scf01238g00112 Petunia axillaris
PGR031G0687 Punica granatum
PGR044G2504 Punica granatum
PGR102G0338 Punica granatum
PGR119G1661 Punica granatum
PGSC0003DMG400004366 Solanum tuberosum
PGSC0003DMG400017822 Solanum tuberosum
PGSC0003DMG400022887 Solanum tuberosum
PGSC0003DMG400027583 Solanum tuberosum
PGSC0003DMG400031223 Solanum tuberosum
Phvul.006G212300 Phaseolus vulgaris
Phvul.010G057800 Phaseolus vulgaris
Phvul.010G127700 Phaseolus vulgaris
Potri.001G166500 Populus trichocarpa
Potri.001G209400 Populus trichocarpa
Potri.003G068500 Populus trichocarpa
Potri.006G109000 Populus trichocarpa
Potri.016G137700 Populus trichocarpa
Pp3c1_24840 Physcomitrium patens
Pp3c2_15830 Physcomitrium patens
PRCOL_00000972 Prasinoderma coloniale
PRCOL_00001614 Prasinoderma coloniale
Prupe.1G562600 Prunus persica
Prupe.2G264800 Prunus persica
Prupe.3G038100 Prunus persica
Prupe.6G294600 Prunus persica
Psat0s115g0040 Pisum sativum
Psat1g106240 Pisum sativum
Psat1g219960 Pisum sativum
Psat2g063080 Pisum sativum
Psat4g167640 Pisum sativum
Psat4g209240 Pisum sativum
Psat5g157320 Pisum sativum
Psat7g042000 Pisum sativum
PSO017G7244 Papaver somniferum
PSO063G0216 Papaver somniferum
PSO170G5766 Papaver somniferum
PSO386G0213 Papaver somniferum
PSO421G0029 Papaver somniferum
PSO724G0605 Papaver somniferum
QL02p098604 Quercus lobata
QL03p059914 Quercus lobata
QL05p003857 Quercus lobata
QL07p031979 Quercus lobata
QL08p018255 Quercus lobata
QL08p018257 Quercus lobata
QL08p064916 Quercus lobata
RcHm_v2.0_Chr1g0314071 Rosa chinensis
RcHm_v2.0_Chr1g0372401 Rosa chinensis
RcHm_v2.0_Chr1g0372411 Rosa chinensis
RcHm_v2.0_Chr2g0146271 Rosa chinensis
RcHm_v2.0_Chr3g0460391 Rosa chinensis
RcHm_v2.0_Chr7g0224311 Rosa chinensis
RcHm_v2.0_Chr7g0224371 Rosa chinensis
Rhsim05G0231200 Rhododendron simsii
Rhsim08G0240700 Rhododendron simsii
Rhsim11G0131400 Rhododendron simsii
Sabra01G0161700 Salix brachista
Sabra03G0040100 Salix brachista
Sabra04G0154000 Salix brachista
SalBow3G1029 Salvia bowleyana
SalBow6G3427 Salvia bowleyana
SalBow6G4751 Salvia bowleyana
SalBow7G3527 Salvia bowleyana
Sc12g0010740 Simmondsia chinensis
Sc16g0003940 Simmondsia chinensis
Sc20g0007020 Simmondsia chinensis
Sed0000522 Sechium edule
Sed0002616 Sechium edule
Sed0014771 Sechium edule
Sed0019574 Sechium edule
Sed0019876 Sechium edule
Sed0025951 Sechium edule
SEGI_07850 Sequoiadendron giganteum
SEGI_19774 Sequoiadendron giganteum
SEGI_22709 Sequoiadendron giganteum
SEGI_30313 Sequoiadendron giganteum
SEGI_31665 Sequoiadendron giganteum
SEGI_38115 Sequoiadendron giganteum
SEGI_38181 Sequoiadendron giganteum
SGA_v2.0_scaffold145G36066 Striga asiatica
SGA_v2.0_scaffold305G47985 Striga asiatica
SGA_v2.0_scaffold44G16624 Striga asiatica
SGA_v2.0_scaffold4G02074 Striga asiatica
SGA_v2.0_scaffold60G20886 Striga asiatica
SGA_v2.0_scaffold68G22849 Striga asiatica
SHI16601 Sapria himalayana
SHI25237 Sapria himalayana
SHI25238 Sapria himalayana
SMO116G0375 Selaginella moellendorffii
SMO117G0086 Selaginella moellendorffii
SMO364G0713 Selaginella moellendorffii
Solyc03g122250.3 Solanum lycopersicum
Solyc06g048590.3 Solanum lycopersicum
Solyc10g045600.2 Solanum lycopersicum
Solyc10g074970.1 Solanum lycopersicum
Solyc12g049390.2 Solanum lycopersicum
Sopen03g040990 Solanum pennellii
Sopen06g014780 Solanum pennellii
Sopen10g015920 Solanum pennellii
Sopen10g027460 Solanum pennellii
Sopen12g023870 Solanum pennellii
Sp2g12540 Schrenkiella parvula
Sp5g27560 Schrenkiella parvula
TAR381G1370 Trochodendron aralioides
TAR623G0561 Trochodendron aralioides
TAR624G0978 Trochodendron aralioides
TAR629G1907 Trochodendron aralioides
TAR633G2680 Trochodendron aralioides
TAR636G1153 Trochodendron aralioides
THA.LOC104808060 Tarenaya hassleriana
THA.LOC104812258 Tarenaya hassleriana
THA.LOC104823352 Tarenaya hassleriana
THA.LOC104823361 Tarenaya hassleriana
Thecc.02G041100 Theobroma cacao
Thecc.04G150900 Theobroma cacao
Thecc.06G123600 Theobroma cacao
Thecc.10G177100 Theobroma cacao
Thhalv10000865m.g Eutrema salsugineum
Thhalv10007387m.g Eutrema salsugineum
Thhalv10018416m.g Eutrema salsugineum
Thhalv10023415m.g Eutrema salsugineum
TPR.G16746 Trifolium pratense
TPR.G2068 Trifolium pratense
TPR.G27038 Trifolium pratense
TPR.G28725 Trifolium pratense
TWI34G0779 Tripterygium wilfordii
TWI53G0678 Tripterygium wilfordii
TWI59G1137 Tripterygium wilfordii
TWI63G1412 Tripterygium wilfordii
TWI73G0602 Tripterygium wilfordii
unitig_22.g5961 Utricularia gibba
unitig_578.g16606 Utricularia gibba
unitig_578.g16607 Utricularia gibba
unitig_88.g27821 Utricularia gibba
vmacro01775 Vaccinium macrocarpon
vmacro15048 Vaccinium macrocarpon
vmacro20373 Vaccinium macrocarpon
VMungo0331G0727 Vigna mungo
VMungo0331G1718 Vigna mungo
VMungo0540G0359 Vigna mungo
Zm00001eb015990 Zea mays
Zm00001eb032170 Zea mays
Zm00001eb032180 Zea mays
Zm00001eb032190 Zea mays
Zm00001eb100170 Zea mays
Zm00001eb103710 Zea mays
Zm00001eb113730 Zea mays
Zm00001eb314050 Zea mays
Zm00001eb395150 Zea mays

User provided reference genes

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