Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p28990 Brassica napus
A02p44120 Brassica napus
A03p27650 Brassica napus
A06p29640 Brassica napus
A06p32800 Brassica napus
A09p09240 Brassica napus
A09p17740 Brassica napus
A09p65020 Brassica napus
Aa31LG11G740 Aethionema arabicum
Aa31LG1G16170 Aethionema arabicum
Aa31LG1G4420 Aethionema arabicum
Aa31LG2G10210 Aethionema arabicum
Aa31LG3G6100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4506 Anthoceros agrestis
Actinidia08179 Actinidia chinensis
Actinidia11977 Actinidia chinensis
Actinidia15009 Actinidia chinensis
Actinidia16420 Actinidia chinensis
Actinidia19086 Actinidia chinensis
Actinidia33048 Actinidia chinensis
Actinidia34535 Actinidia chinensis
Actinidia34954 Actinidia chinensis
Ah.02g112760 Amaranthus hybridus
Ah.02g125380 Amaranthus hybridus
Ah.02g131530 Amaranthus hybridus
Ah.07g202700 Amaranthus hybridus
Ah.11g046090 Amaranthus hybridus
AL1G21340 Arabidopsis lyrata
AL2G16680 Arabidopsis lyrata
AL8G24080 Arabidopsis lyrata
AL8G39920 Arabidopsis lyrata
AL8G43680 Arabidopsis lyrata
Aqoxy3G00924 Aquilegia oxysepala
Aqoxy3G03075 Aquilegia oxysepala
Aqoxy6G02567 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.26CS6I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3Y0Z5X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.82RE74 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DAGB12 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DMY41A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JRGJ4L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JVCS8V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K7KBAQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TF4B4Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TTC9TX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VRU113 Arachis hypogaea
AT1G10530 Arabidopsis thaliana
AT1G60010 Arabidopsis thaliana
AT5G50090 Arabidopsis thaliana
AT5G62900 Arabidopsis thaliana
AT5G67620 Arabidopsis thaliana
ATR0739G088 Amborella trichopoda
Atru.chr11.1969 Acer truncatum
Atru.chr3.1025 Acer truncatum
Atru.chr9.2419 Acer truncatum
AUR62004020 Chenopodium quinoa
AUR62005316 Chenopodium quinoa
AUR62007528 Chenopodium quinoa
AUR62008270 Chenopodium quinoa
AUR62026601 Chenopodium quinoa
AUR62031030 Chenopodium quinoa
BcaB01g02919 Brassica carinata
BcaB02g09702 Brassica carinata
BcaB04g20040 Brassica carinata
BcaB04g20041 Brassica carinata
BcaB04g20246 Brassica carinata
BcaB07g31198 Brassica carinata
BcaB08g37356 Brassica carinata
BcaC01g02534 Brassica carinata
BcaC01g04831 Brassica carinata
BcaC03g18362 Brassica carinata
BcaC04g22209 Brassica carinata
BcaC04g23238 Brassica carinata
BcaC04g23240 Brassica carinata
BcaC04g23388 Brassica carinata
BcaC07g41818 Brassica carinata
BcaC09g49443 Brassica carinata
BcaNung05871 Brassica carinata
BolC1t03632H Brassica oleracea
BolC2t12502H Brassica oleracea
BolC3t15658H Brassica oleracea
BolC3t18229H Brassica oleracea
BolC3t18638H Brassica oleracea
BolC8t52419H Brassica oleracea
BolC9t53805H Brassica oleracea
BolC9t53808H Brassica oleracea
BolC9t53975H Brassica oleracea
BolC9t55122H Brassica oleracea
BraA01t03002Z Brassica rapa
BraA02t09335Z Brassica rapa
BraA03t11978Z Brassica rapa
BraA06t25912Z Brassica rapa
BraA06t26212Z Brassica rapa
BraA09t36443Z Brassica rapa
BraA09t36577Z Brassica rapa
BraA09t37406Z Brassica rapa
BraA09t41845Z Brassica rapa
C01p36730 Brassica napus
C02p64380 Brassica napus
C03p33360 Brassica napus
C03p59670 Brassica napus
C03p63830 Brassica napus
C08p48820 Brassica napus
C09p08920 Brassica napus
C09p08960 Brassica napus
C09p10800 Brassica napus
C09p22090 Brassica napus
CANSAT01G1144 Cannabis sativa
CANSAT01G1561 Cannabis sativa
CANSAT80G1062 Cannabis sativa
CARHR010680 Cardamine hirsuta
CARHR052970 Cardamine hirsuta
CARHR258540 Cardamine hirsuta
CARHR276710 Cardamine hirsuta
CARHR279970 Cardamine hirsuta
Carub.0001s0997 Capsella rubella
Carub.0002s0523 Capsella rubella
Carub.0008s1009 Capsella rubella
Carub.0008s2361 Capsella rubella
Carub.0008s2685 Capsella rubella
Ca_04625_v3 Cicer arietinum L.
Ca_16204_v3 Cicer arietinum L.
Ca_21897_v3 Cicer arietinum L.
Ca_22099_v3 Cicer arietinum L.
Ca_22772_v3 Cicer arietinum L.
Ca_30475_v3 Cicer arietinum L.
Cc04_g13030 Coffea canephora
Cc07_g07190 Coffea canephora
Cc11_g14310 Coffea canephora
CDE05G3295 Ceratophyllum demersum
CDE05G3395 Ceratophyllum demersum
CDE10G0896 Ceratophyllum demersum
CDE10G1180 Ceratophyllum demersum
Cfa004141 Carpinus fangiana
Cfa009131 Carpinus fangiana
Cfa019080 Carpinus fangiana
Ciclev10022406m.g Citrus clementina
Ciclev10026573m.g Citrus clementina
Ciclev10032872m.g Citrus clementina
CiPaw.01G003500 Carya illinoinensis
CiPaw.05G149500 Carya illinoinensis
CiPaw.06G072500 Carya illinoinensis
CiPaw.11G030600 Carya illinoinensis
CiPaw.12G024100 Carya illinoinensis
ClCG01G014070 Citrullus lanatus
ClCG01G017670 Citrullus lanatus
ClCG05G025080 Citrullus lanatus
ClCG06G016790 Citrullus lanatus
COL.COLO4_11590 Corchorus olitorius
COL.COLO4_24760 Corchorus olitorius
COL.COLO4_37909 Corchorus olitorius
Cpa.g.sc110.29 Carica papaya
Cpa.g.sc5.357 Carica papaya
Cpa.g.sc6.4 Carica papaya
CsaV3_1G001730 Cucumis sativus L.
CsaV3_1G008280 Cucumis sativus L.
CsaV3_5G031820 Cucumis sativus L.
CsaV3_6G044200 Cucumis sativus L.
CSS0004522 Camellia sinensis var. sinensis
CSS0015516 Camellia sinensis var. sinensis
CSS0039543 Camellia sinensis var. sinensis
CSS0040761 Camellia sinensis var. sinensis
CSS0042271 Camellia sinensis var. sinensis
CSS0043052 Camellia sinensis var. sinensis
CSS0043204 Camellia sinensis var. sinensis
DCAR_016500 Daucus carota
DCAR_024526 Daucus carota
DCAR_025813 Daucus carota
DCAR_026118 Daucus carota
DCAR_026549 Daucus carota
Dinv00292 Davidia involucrata
Dinv01958 Davidia involucrata
Dinv04038 Davidia involucrata
Dinv09168 Davidia involucrata
Dinv12878 Davidia involucrata
Dinv20688 Davidia involucrata
Dinv24897 Davidia involucrata
Dinv31002 Davidia involucrata
Dinv31101 Davidia involucrata
Duzib068G0489 Durio zibethinus
Duzib147G0977 Durio zibethinus
Duzib187G1382 Durio zibethinus
Duzib205G1727 Durio zibethinus
Duzib248G0642 Durio zibethinus
Duzib251G0278 Durio zibethinus
Duzib264G1166 Durio zibethinus
Duzib268G1718 Durio zibethinus
ECA232G0734 Erigeron canadensis
ECA233G3542 Erigeron canadensis
ECA246G2308 Erigeron canadensis
ECA246G3909 Erigeron canadensis
ECA247G1598 Erigeron canadensis
EL10Ac5g10812 Beta vulgaris
EL10Ac6g13617 Beta vulgaris
EL10Ac6g15610 Beta vulgaris
Eucgr.B00346 Eucalyptus grandis
Eucgr.B02556 Eucalyptus grandis
Eucgr.B03364 Eucalyptus grandis
Eucgr.H02314 Eucalyptus grandis
FAN04G1345 Fragaria x ananassa
FAN07G2170 Fragaria x ananassa
FAN08G1025 Fragaria x ananassa
FAN12G1377 Fragaria x ananassa
FAN13G1993 Fragaria x ananassa
FAN17G1237 Fragaria x ananassa
FAN18G3364 Fragaria x ananassa
FAN19G0102 Fragaria x ananassa
FAN22G2035 Fragaria x ananassa
FAN23G2535 Fragaria x ananassa
FAN26G2138 Fragaria x ananassa
FAN28G0562 Fragaria x ananassa
FvH4_1g17910 Fragaria vesca
FvH4_4g34950 Fragaria vesca
FvH4_5g16570 Fragaria vesca
Glyma.01G035300 Glycine max
Glyma.02G030800 Glycine max
Glyma.04G179900 Glycine max
Glyma.05G034800 Glycine max
Glyma.05G106700 Glycine max
Glyma.06G184900 Glycine max
Glyma.08G290800 Glycine max
Glyma.17G092500 Glycine max
Glyma.17G160100 Glycine max
Glyma.18G133300 Glycine max
Gohir.A02G150900 Gossypium hirsutum
Gohir.A03G142100 Gossypium hirsutum
Gohir.A05G318800 Gossypium hirsutum
Gohir.A11G040700 Gossypium hirsutum
Gohir.A11G214100 Gossypium hirsutum
Gohir.D02G165400 Gossypium hirsutum
Gohir.D03G029500 Gossypium hirsutum
Gohir.D05G321000 Gossypium hirsutum
Gohir.D11G043900 Gossypium hirsutum
Gohir.D11G209300 Gossypium hirsutum
Gorai.003G031100 Gossypium raimondii
Gorai.005G185500 Gossypium raimondii
Gorai.007G047300 Gossypium raimondii
Gorai.007G224500 Gossypium raimondii
Gorai.009G344400 Gossypium raimondii
GSVIVG01002632001 Vitis vinifera
GSVIVG01007810001 Vitis vinifera
GSVIVG01020165001 Vitis vinifera
HanXRQChr00c0378g0574291 Helianthus annuus
HanXRQChr02g0036161 Helianthus annuus
HanXRQChr09g0271711 Helianthus annuus
HanXRQChr11g0323621 Helianthus annuus
HanXRQChr12g0371321 Helianthus annuus
HanXRQChr12g0376321 Helianthus annuus
HanXRQChr14g0445321 Helianthus annuus
HanXRQChr15g0472591 Helianthus annuus
HanXRQChr15g0476671 Helianthus annuus
HanXRQChr16g0503541 Helianthus annuus
HanXRQChr16g0531821 Helianthus annuus
Haze_12162 Corylus avellana
Haze_15272 Corylus avellana
Hma1.2p1_0002F.1_g002680 Hydrangea macrophylla
Hma1.2p1_0160F.1_g070630 Hydrangea macrophylla
Hma1.2p1_0701F.1_g206030 Hydrangea macrophylla
Hma1.2p1_1017F.1_g248230 Hydrangea macrophylla
Hma1.2p1_2497F.1_g323335 Hydrangea macrophylla
HPP92_007767 Vanilla planifolia
HPP92_007866 Vanilla planifolia
HPP92_010303 Vanilla planifolia
HPP92_010526 Vanilla planifolia
HPP92_010537 Vanilla planifolia
HPP92_010842 Vanilla planifolia
HPP92_017074 Vanilla planifolia
HPP92_017287 Vanilla planifolia
HPP92_017333 Vanilla planifolia
HPP92_024908 Vanilla planifolia
Hund02715 Selenicereus undatus
Hund05958 Selenicereus undatus
Hund09413 Selenicereus undatus
Hund16407 Selenicereus undatus
Hund25321 Selenicereus undatus
Lalb_Chr05g0217171 Lupinus albus
Lalb_Chr05g0225831 Lupinus albus
Lalb_Chr07g0182591 Lupinus albus
Lalb_Chr12g0201471 Lupinus albus
Lalb_Chr13g0297931 Lupinus albus
Lalb_Chr16g0382461 Lupinus albus
Lj1g0005207 Lotus japonicus
Lj2g0020903 Lotus japonicus
Lj3P1049T35 Lonicera japonica
Lj4g0002988 Lotus japonicus
Lj4g0022917 Lotus japonicus
Lj5P121T98 Lonicera japonica
Lj6A801T78 Lonicera japonica
Lj7P108T15 Lonicera japonica
Lj9P452T33 Lonicera japonica
Lj9P452T36 Lonicera japonica
Lsat_1_v5_gn_1_26361 Lactuca sativa
Lsat_1_v5_gn_2_82620 Lactuca sativa
Lsat_1_v5_gn_3_49060 Lactuca sativa
Lsat_1_v5_gn_3_86700 Lactuca sativa
Lsat_1_v5_gn_4_72781 Lactuca sativa
Lsat_1_v5_gn_8_160040 Lactuca sativa
Manes.01G197100 Manihot esculenta
Manes.05G090500 Manihot esculenta
Manes.06G102000 Manihot esculenta
Manes.12G115700 Manihot esculenta
Manes.13G110500 Manihot esculenta
Manes.14G069300 Manihot esculenta
Mapoly0030s0105 Marchantia polymorpha
MBI14_g32741_MAGBIO Magnolia biondii
MBI14_g48279_MAGBIO Magnolia biondii
MBI15_g16617_MAGBIO Magnolia biondii
MBI15_g45679_MAGBIO Magnolia biondii
MBI16_g21722_MAGBIO Magnolia biondii
MD02G1187500 Malus domestica
MD06G1178700 Malus domestica
MD13G1087400 Malus domestica
MD14G1185100 Malus domestica
MD15G1298400 Malus domestica
MD16G1087900 Malus domestica
Medtr3g078300 Medicago truncatula
Medtr4g097220 Medicago truncatula
Medtr4g106790 Medicago truncatula
Medtr5g035430 Medicago truncatula
Medtr8g063200 Medicago truncatula
MELO3C002244.2 Cucumis melo
MELO3C007644.2 Cucumis melo
MELO3C012021.2 Cucumis melo
MELO3C017113.2 Cucumis melo
Migut.D01786 Erythranthe guttata
Migut.E00144 Erythranthe guttata
Migut.H00339 Erythranthe guttata
Migut.I00045 Erythranthe guttata
Migut.L00419 Erythranthe guttata
Migut.L01440 Erythranthe guttata
MSTRG.11419 Avicennia marina
MSTRG.15347 Avicennia marina
MSTRG.23101 Avicennia marina
MSTRG.3475 Avicennia marina
MSTRG.4380 Avicennia marina
MSTRG.7878 Avicennia marina
MSTRG.9669 Avicennia marina
Nitab4.5_0000003g0410 Nicotiana tabacum
Nitab4.5_0000142g0260 Nicotiana tabacum
Nitab4.5_0001422g0050 Nicotiana tabacum
Nitab4.5_0004025g0010 Nicotiana tabacum
Nitab4.5_0004025g0020 Nicotiana tabacum
Nitab4.5_0004033g0040 Nicotiana tabacum
Nitab4.5_0004536g0020 Nicotiana tabacum
Nitab4.5_0009569g0030 Nicotiana tabacum
Nitab4.5_0010759g0010 Nicotiana tabacum
Nitab4.5_0012208g0010 Nicotiana tabacum
Nn1g04534 Nelumbo nucifera
Nn3g16970 Nelumbo nucifera
Nn3g21788 Nelumbo nucifera
Nn4g22875 Nelumbo nucifera
Nn5g30620 Nelumbo nucifera
Oeu001666.1 Olea europaea
Oeu012252.2 Olea europaea
Oeu013329.1 Olea europaea
Oeu014254.1 Olea europaea
Oeu016351.1 Olea europaea
Oeu019178.1 Olea europaea
Oeu020456.1 Olea europaea
Oeu020458.1 Olea europaea
Oeu025443.1 Olea europaea
Oeu028552.1 Olea europaea
Oeu039487.1 Olea europaea
Oeu040756.1 Olea europaea
Oeu041580.1 Olea europaea
Oeu054203.1 Olea europaea
Os02g0741700 Oryza sativa ssp. japonica
Os03g0200200 Oryza sativa ssp. japonica
Os03g0246150 Oryza sativa ssp. japonica
Os06g0236300 Oryza sativa ssp. japonica
Os07g0602050 Oryza sativa ssp. japonica
Os08g0420700 Oryza sativa ssp. japonica
Os09g0381600 Oryza sativa ssp. japonica
Os10g0352000 Oryza sativa ssp. japonica
Peaxi162Scf00017g02418 Petunia axillaris
Peaxi162Scf00421g00610 Petunia axillaris
Peaxi162Scf00548g00314 Petunia axillaris
Peaxi162Scf00689g00337 Petunia axillaris
PGR083G1324 Punica granatum
PGR102G0641 Punica granatum
PGR102G1621 Punica granatum
PGR119G1039 Punica granatum
PGSC0003DMG400015574 Solanum tuberosum
PGSC0003DMG400021413 Solanum tuberosum
PGSC0003DMG400024587 Solanum tuberosum
PGSC0003DMG400033027 Solanum tuberosum
Phvul.002G074400 Phaseolus vulgaris
Phvul.003G054700 Phaseolus vulgaris
Phvul.003G197700 Phaseolus vulgaris
Phvul.003G234100 Phaseolus vulgaris
Phvul.009G181100 Phaseolus vulgaris
Potri.007G005600 Populus trichocarpa
Potri.008G146500 Populus trichocarpa
Potri.010G095400 Populus trichocarpa
Potri.012G077300 Populus trichocarpa
Potri.015G072501 Populus trichocarpa
Pp3c12_1920 Physcomitrium patens
Pp3c15_2840 Physcomitrium patens
Pp3c9_2480 Physcomitrium patens
Prupe.1G258800 Prunus persica
Prupe.5G177800 Prunus persica
Prupe.6G219300 Prunus persica
Psat2g111240 Pisum sativum
Psat4g056200 Pisum sativum
Psat4g081400 Pisum sativum
Psat4g125560 Pisum sativum
Psat5g113920 Pisum sativum
PSO017G4684 Papaver somniferum
PSO063G6824 Papaver somniferum
PSO161G0129 Papaver somniferum
PSO170G4342 Papaver somniferum
PSO478G4378 Papaver somniferum
PSO832G0878 Papaver somniferum
QL03p062323 Quercus lobata
QL03p062364 Quercus lobata
QL06p039450 Quercus lobata
QL10p013422 Quercus lobata
RcHm_v2.0_Chr2g0108341 Rosa chinensis
RcHm_v2.0_Chr4g0444411 Rosa chinensis
RcHm_v2.0_Chr7g0179551 Rosa chinensis
Rhsim10G0098900 Rhododendron simsii
Rhsim12G0048700 Rhododendron simsii
Rhsim12G0123900 Rhododendron simsii
Rhsim12G0162400 Rhododendron simsii
Sabra08G0111400 Salix brachista
Sabra10G0068000 Salix brachista
Sabra12G0055300 Salix brachista
SalBow2G0071 Salvia bowleyana
SalBow2G1498 Salvia bowleyana
SalBow5G4366 Salvia bowleyana
SalBow5G5581 Salvia bowleyana
SalBow8G4017 Salvia bowleyana
Sc04g0008910 Simmondsia chinensis
Sc11g0001340 Simmondsia chinensis
Sc12g0005530 Simmondsia chinensis
Sed0002944 Sechium edule
Sed0010485 Sechium edule
Sed0011843 Sechium edule
Sed0014157 Sechium edule
Sed0015292 Sechium edule
Sed0015446 Sechium edule
Sed0019128 Sechium edule
Sed0026012 Sechium edule
SGA_v2.0_scaffold114G31847 Striga asiatica
SGA_v2.0_scaffold467G52023 Striga asiatica
SGA_v2.0_scaffold63G21691 Striga asiatica
SGA_v2.0_scaffold7G04114 Striga asiatica
SGA_v2.0_scaffold87G27004 Striga asiatica
SMO367G0589 Selaginella moellendorffii
Solyc02g092240.3 Solanum lycopersicum
Solyc03g114020.3 Solanum lycopersicum
Solyc05g006030.3 Solanum lycopersicum
Solyc06g071320.3 Solanum lycopersicum
Sopen02g036810 Solanum pennellii
Sopen03g033070 Solanum pennellii
Sopen05g002060 Solanum pennellii
Sopen06g027620 Solanum pennellii
Sp1g09170 Schrenkiella parvula
Sp2g04570 Schrenkiella parvula
Sp2g26040 Schrenkiella parvula
Sp2g29030 Schrenkiella parvula
Sp6g11950 Schrenkiella parvula
TAR371G0450 Trochodendron aralioides
TAR376G0014 Trochodendron aralioides
TAR622G1099 Trochodendron aralioides
TAR628G0821 Trochodendron aralioides
TAR629G2611 Trochodendron aralioides
THA.LOC104798974 Tarenaya hassleriana
THA.LOC104799775 Tarenaya hassleriana
THA.LOC104808401 Tarenaya hassleriana
THA.LOC104819267 Tarenaya hassleriana
THA.LOC104819567 Tarenaya hassleriana
THA.LOC104823664 Tarenaya hassleriana
THA.LOC104827670 Tarenaya hassleriana
Thecc.01G073900 Theobroma cacao
Thecc.02G243300 Theobroma cacao
Thecc.03G006100 Theobroma cacao
Thhalv10004994m.g Eutrema salsugineum
Thhalv10005054m.g Eutrema salsugineum
Thhalv10009594m.g Eutrema salsugineum
Thhalv10016001m.g Eutrema salsugineum
Thhalv10023720m.g Eutrema salsugineum
TPR.G13514 Trifolium pratense
TPR.G15085 Trifolium pratense
TPR.G24258 Trifolium pratense
TPR.G37506 Trifolium pratense
TPR.G40427 Trifolium pratense
TPR.G7109 Trifolium pratense
TWI18G0752 Tripterygium wilfordii
TWI36G0378 Tripterygium wilfordii
TWI60G0901 Tripterygium wilfordii
TWI81G0985 Tripterygium wilfordii
unitig_0.g499 Utricularia gibba
unitig_21.g20412 Utricularia gibba
unitig_27.g25200 Utricularia gibba
unitig_60.g25413 Utricularia gibba
unitig_62.g23676 Utricularia gibba
unitig_699.g19493 Utricularia gibba
unitig_750.g28478 Utricularia gibba
vmacro01195 Vaccinium macrocarpon
vmacro05418 Vaccinium macrocarpon
vmacro16276 Vaccinium macrocarpon
vmacro16594 Vaccinium macrocarpon
VMungo0251G2497 Vigna mungo
VMungo0251G2703 Vigna mungo
VMungo1215G2845 Vigna mungo
VMungo1215G2856 Vigna mungo
VMungo1309G2824 Vigna mungo
Zm00001eb007870 Zea mays
Zm00001eb042460 Zea mays
Zm00001eb168630 Zea mays
Zm00001eb194700 Zea mays
Zm00001eb254190 Zea mays
Zm00001eb279890 Zea mays
Zm00001eb311700 Zea mays
Zm00001eb371960 Zea mays
Zm00001eb400840 Zea mays

User provided reference genes

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