If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ), 'gf_id' => 'HOM05D000593', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000593' ), 'data_identifier' => 'HOM05D000593', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000593', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '944', 'num_species' => '38' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'Ah.01g016390' => 'amhyb', 'Aqoxy1G03120' => 'aox', 'Aqoxy2G01165' => 'aox', 'Aqoxy2G01181' => 'aox', 'Aqoxy2G01272' => 'aox', 'Aqoxy2G01273' => 'aox', 'Aqoxy2G01326' => 'aox', 'Aqoxy2G01938' => 'aox', 'Aqoxy3G03004' => 'aox', 'Aqoxy3G03005' => 'aox', 'Aqoxy3G03006' => 'aox', 'Aqoxy4G00461' => 'aox', 'Aqoxy4G00839' => 'aox', 'Aqoxy4G00841' => 'aox', 'Aqoxy4G01344' => 'aox', 'Aqoxy4G01994' => 'aox', 'Aqoxy4G02009' => 'aox', 'Aqoxy5G01684' => 'aox', 'Aqoxy5G03436' => 'aox', 'Aqoxy6G02233' => 'aox', 'Aqoxy7G01762' => 'aox', 'Aqoxy7G02031' => 'aox', 'Aqoxy7G02090' => 'aox', 'Aqoxy7G02356' => 'aox', 'Aqoxy7G02547' => 'aox', 'Atru.chr1.1796' => 'acertr', 'Atru.chr1.3004' => 'acertr', 'Atru.chr1.3005' => 'acertr', 'Atru.chr1.3257' => 'acertr', 'Atru.chr1.3258' => 'acertr', 'Atru.chr10.850' => 'acertr', 'Atru.chr11.1014' => 'acertr', 'Atru.chr11.19' => 'acertr', 'Atru.chr11.22' => 'acertr', 'Atru.chr11.23' => 'acertr', 'Atru.chr2.2322' => 'acertr', 'Atru.chr2.270' => 'acertr', 'Atru.chr2.2773' => 'acertr', 'Atru.chr2.576' => 'acertr', 'Atru.chr3.1390' => 'acertr', 'Atru.chr3.3235' => 'acertr', 'Atru.chr4.569' => 'acertr', 'Atru.chr4.889' => 'acertr', 'Atru.chr4.890' => 'acertr', 'Atru.chr6.1396' => 'acertr', 'Atru.chr6.964' => 'acertr', 'Atru.chr7.1229' => 'acertr', 'Atru.chr7.1886' => 'acertr', 'Atru.chr8.660' => 'acertr', 'Atru.chr9.1259' => 'acertr', 'AUR62042573' => 'cqu', 'CANSAT01G1396' => 'cansat', 'CANSAT64G1746' => 'cansat', 'CANSAT64G1841' => 'cansat', 'Ca_02101_v3' => 'car', 'Ca_02118_v3' => 'car', 'Ca_02614_v3' => 'car', 'Ca_02694_v3' => 'car', 'Ca_02860_v3' => 'car', 'Ca_02918_v3' => 'car', 'Ca_02920_v3' => 'car', 'Ca_02967_v3' => 'car', 'Ca_03111_v3' => 'car', 'Ca_03223_v3' => 'car', 'Ca_03881_v3' => 'car', 'Ca_04248_v3' => 'car', 'Ca_04412_v3' => 'car', 'Ca_04645_v3' => 'car', 'Ca_05086_v3' => 'car', 'Ca_05378_v3' => 'car', 'Ca_05380_v3' => 'car', 'Ca_06057_v3' => 'car', 'Ca_06519_v3' => 'car', 'Ca_06545_v3' => 'car', 'Ca_06915_v3' => 'car', 'Ca_07148_v3' => 'car', 'Ca_07260_v3' => 'car', 'Ca_07400_v3' => 'car', 'Ca_07465_v3' => 'car', 'Ca_07511_v3' => 'car', 'Ca_07560_v3' => 'car', 'Ca_08363_v3' => 'car', 'Ca_08874_v3' => 'car', 'Ca_09932_v3' => 'car', 'Ca_11763_v3' => 'car', 'Ca_11776_v3' => 'car', 'Ca_11824_v3' => 'car', 'Ca_12893_v3' => 'car', 'Ca_13605_v3' => 'car', 'Ca_13826_v3' => 'car', 'Ca_14191_v3' => 'car', 'Ca_15677_v3' => 'car', 'Ca_18101_v3' => 'car', 'Ca_18119_v3' => 'car', 'Ca_18398_v3' => 'car', 'Ca_19793_v3' => 'car', 'Ca_19899_v3' => 'car', 'Ca_20069_v3' => 'car', 'Ca_20438_v3' => 'car', 'Ca_22386_v3' => 'car', 'Ca_22767_v3' => 'car', 'Ca_22806_v3' => 'car', 'Ca_23077_v3' => 'car', 'Ca_23377_v3' => 'car', 'Ca_23807_v3' => 'car', 'Ca_25222_v3' => 'car', 'Ca_25309_v3' => 'car', 'Ca_26162_v3' => 'car', 'Ca_26473_v3' => 'car', 'Ca_26592_v3' => 'car', 'Ca_26665_v3' => 'car', 'Ca_26997_v3' => 'car', 'Ca_27089_v3' => 'car', 'Ca_27370_v3' => 'car', 'CSS0002063' => 'camsi', 'CSS0002147' => 'camsi', 'CSS0003221' => 'camsi', 'CSS0003309' => 'camsi', 'CSS0004654' => 'camsi', 'CSS0004806' => 'camsi', 'CSS0005100' => 'camsi', 'CSS0006571' => 'camsi', 'CSS0006887' => 'camsi', 'CSS0009299' => 'camsi', 'CSS0009535' => 'camsi', 'CSS0010192' => 'camsi', 'CSS0010240' => 'camsi', 'CSS0013543' => 'camsi', 'CSS0013856' => 'camsi', 'CSS0014323' => 'camsi', 'CSS0015084' => 'camsi', 'CSS0015259' => 'camsi', 'CSS0016602' => 'camsi', 'CSS0017341' => 'camsi', 'CSS0017978' => 'camsi', 'CSS0019902' => 'camsi', 'CSS0023038' => 'camsi', 'CSS0023820' => 'camsi', 'CSS0025640' => 'camsi', 'CSS0027439' => 'camsi', 'CSS0028555' => 'camsi', 'CSS0030203' => 'camsi', 'CSS0033855' => 'camsi', 'CSS0037267' => 'camsi', 'CSS0038546' => 'camsi', 'CSS0038609' => 'camsi', 'CSS0040938' => 'camsi', 'CSS0044639' => 'camsi', 'CSS0048160' => 'camsi', 'Dinv16416' => 'din', 'ECA100G0007' => 'eca', 'ECA169G0007' => 'eca', 'ECA232G0408' => 'eca', 'ECA232G0496' => 'eca', 'ECA232G0850' => 'eca', 'ECA232G0916' => 'eca', 'ECA232G0999' => 'eca', 'ECA232G1247' => 'eca', 'ECA232G1342' => 'eca', 'ECA232G1557' => 'eca', 'ECA232G1583' => 'eca', 'ECA232G1658' => 'eca', 'ECA232G1857' => 'eca', 'ECA232G1870' => 'eca', 'ECA232G1978' => 'eca', 'ECA232G2005' => 'eca', 'ECA232G2043' => 'eca', 'ECA232G2357' => 'eca', 'ECA232G2473' => 'eca', 'ECA232G2675' => 'eca', 'ECA232G2870' => 'eca', 'ECA232G2921' => 'eca', 'ECA232G3226' => 'eca', 'ECA232G3245' => 'eca', 'ECA232G3406' => 'eca', 'ECA232G3502' => 'eca', 'ECA232G3686' => 'eca', 'ECA232G3757' => 'eca', 'ECA232G3923' => 'eca', 'ECA232G4171' => 'eca', 'ECA232G4245' => 'eca', 'ECA232G4313' => 'eca', 'ECA232G4429' => 'eca', 'ECA232G4590' => 'eca', 'ECA232G4650' => 'eca', 'ECA232G4680' => 'eca', 'ECA232G4778' => 'eca', 'ECA233G0058' => 'eca', 'ECA233G0180' => 'eca', 'ECA233G0222' => 'eca', 'ECA233G0449' => 'eca', 'ECA233G0460' => 'eca', 'ECA233G0492' => 'eca', 'ECA233G0533' => 'eca', 'ECA233G0535' => 'eca', 'ECA233G0601' => 'eca', 'ECA233G0795' => 'eca', 'ECA233G0972' => 'eca', 'ECA233G1139' => 'eca', 'ECA233G1290' => 'eca', 'ECA233G1330' => 'eca', 'ECA233G1430' => 'eca', 'ECA233G1500' => 'eca', 'ECA233G1670' => 'eca', 'ECA233G1851' => 'eca', 'ECA233G1852' => 'eca', 'ECA233G2022' => 'eca', 'ECA233G2386' => 'eca', 'ECA233G2415' => 'eca', 'ECA233G2651' => 'eca', 'ECA233G2704' => 'eca', 'ECA233G2800' => 'eca', 'ECA233G2871' => 'eca', 'ECA233G3263' => 'eca', 'ECA233G3386' => 'eca', 'ECA233G3572' => 'eca', 'ECA233G3926' => 'eca', 'ECA233G3993' => 'eca', 'ECA233G4015' => 'eca', 'ECA233G4019' => 'eca', 'ECA233G4219' => 'eca', 'ECA233G4408' => 'eca', 'ECA233G4834' => 'eca', 'ECA233G5078' => 'eca', 'ECA233G5241' => 'eca', 'ECA233G5436' => 'eca', 'ECA233G5764' => 'eca', 'ECA233G5937' => 'eca', 'ECA234G0479' => 'eca', 'ECA234G0693' => 'eca', 'ECA234G0706' => 'eca', 'ECA234G0708' => 'eca', 'ECA234G0943' => 'eca', 'ECA234G1086' => 'eca', 'ECA234G1119' => 'eca', 'ECA234G1482' => 'eca', 'ECA234G1534' => 'eca', 'ECA234G1600' => 'eca', 'ECA234G1628' => 'eca', 'ECA234G1676' => 'eca', 'ECA234G2062' => 'eca', 'ECA234G2373' => 'eca', 'ECA234G2387' => 'eca', 'ECA234G2807' => 'eca', 'ECA234G2878' => 'eca', 'ECA234G2884' => 'eca', 'ECA234G2965' => 'eca', 'ECA234G3189' => 'eca', 'ECA234G3289' => 'eca', 'ECA234G3383' => 'eca', 'ECA234G3548' => 'eca', 'ECA234G3756' => 'eca', 'ECA234G3910' => 'eca', 'ECA234G3958' => 'eca', 'ECA234G3992' => 'eca', 'ECA234G4018' => 'eca', 'ECA234G4358' => 'eca', 'ECA234G4363' => 'eca', 'ECA234G4453' => 'eca', 'ECA234G4672' => 'eca', 'ECA234G4851' => 'eca', 'ECA236G0208' => 'eca', 'ECA236G0773' => 'eca', 'ECA236G0889' => 'eca', 'ECA236G1292' => 'eca', 'ECA236G1489' => 'eca', 'ECA236G1496' => 'eca', 'ECA236G1758' => 'eca', 'ECA236G1874' => 'eca', 'ECA236G2012' => 'eca', 'ECA236G2552' => 'eca', 'ECA236G2719' => 'eca', 'ECA236G2721' => 'eca', 'ECA236G2877' => 'eca', 'ECA236G3194' => 'eca', 'ECA236G3276' => 'eca', 'ECA236G3426' => 'eca', 'ECA236G3455' => 'eca', 'ECA236G3862' => 'eca', 'ECA236G3883' => 'eca', 'ECA236G4172' => 'eca', 'ECA236G4242' => 'eca', 'ECA238G0082' => 'eca', 'ECA238G0119' => 'eca', 'ECA238G0142' => 'eca', 'ECA238G0209' => 'eca', 'ECA238G0279' => 'eca', 'ECA238G0322' => 'eca', 'ECA238G0354' => 'eca', 'ECA238G0529' => 'eca', 'ECA238G0749' => 'eca', 'ECA238G0858' => 'eca', 'ECA238G0908' => 'eca', 'ECA238G1090' => 'eca', 'ECA238G1465' => 'eca', 'ECA238G1679' => 'eca', 'ECA238G2094' => 'eca', 'ECA238G2173' => 'eca', 'ECA238G2313' => 'eca', 'ECA238G2516' => 'eca', 'ECA238G2518' => 'eca', 'ECA238G3256' => 'eca', 'ECA238G3308' => 'eca', 'ECA238G3357' => 'eca', 'ECA238G3393' => 'eca', 'ECA238G3408' => 'eca', 'ECA238G3659' => 'eca', 'ECA238G3672' => 'eca', 'ECA238G3713' => 'eca', 'ECA238G3905' => 'eca', 'ECA238G3937' => 'eca', 'ECA238G4176' => 'eca', 'ECA238G4596' => 'eca', 'ECA240G0195' => 'eca', 'ECA240G0261' => 'eca', 'ECA240G0373' => 'eca', 'ECA240G0759' => 'eca', 'ECA240G0778' => 'eca', 'ECA240G0797' => 'eca', 'ECA240G0915' => 'eca', 'ECA240G1227' => 'eca', 'ECA240G1342' => 'eca', 'ECA240G1438' => 'eca', 'ECA240G1678' => 'eca', 'ECA240G1694' => 'eca', 'ECA240G1825' => 'eca', 'ECA240G1873' => 'eca', 'ECA240G2138' => 'eca', 'ECA240G2144' => 'eca', 'ECA240G2752' => 'eca', 'ECA240G2760' => 'eca', 'ECA240G2855' => 'eca', 'ECA240G2856' => 'eca', 'ECA240G2964' => 'eca', 'ECA240G3053' => 'eca', 'ECA240G3205' => 'eca', 'ECA240G3207' => 'eca', 'ECA240G3249' => 'eca', 'ECA240G3433' => 'eca', 'ECA240G3759' => 'eca', 'ECA240G3847' => 'eca', 'ECA240G3995' => 'eca', 'ECA240G4055' => 'eca', 'ECA240G4329' => 'eca', 'ECA240G4483' => 'eca', 'ECA240G4490' => 'eca', 'ECA240G4651' => 'eca', 'ECA240G4698' => 'eca', 'ECA240G4748' => 'eca', 'ECA240G4794' => 'eca', 'ECA246G0016' => 'eca', 'ECA246G0026' => 'eca', 'ECA246G0213' => 'eca', 'ECA246G0375' => 'eca', 'ECA246G0555' => 'eca', 'ECA246G0707' => 'eca', 'ECA246G0786' => 'eca', 'ECA246G0792' => 'eca', 'ECA246G0877' => 'eca', 'ECA246G1227' => 'eca', 'ECA246G1394' => 'eca', 'ECA246G1575' => 'eca', 'ECA246G1626' => 'eca', 'ECA246G2119' => 'eca', 'ECA246G2587' => 'eca', 'ECA246G2836' => 'eca', 'ECA246G3050' => 'eca', 'ECA246G3143' => 'eca', 'ECA246G3213' => 'eca', 'ECA246G3345' => 'eca', 'ECA246G3415' => 'eca', 'ECA246G4122' => 'eca', 'ECA246G4274' => 'eca', 'ECA246G4416' => 'eca', 'ECA246G4601' => 'eca', 'ECA246G4698' => 'eca', 'ECA246G4937' => 'eca', 'ECA246G4942' => 'eca', 'ECA247G0154' => 'eca', 'ECA247G0158' => 'eca', 'ECA247G0471' => 'eca', 'ECA247G0515' => 'eca', 'ECA247G0516' => 'eca', 'ECA247G0588' => 'eca', 'ECA247G1005' => 'eca', 'ECA247G1019' => 'eca', 'ECA247G1059' => 'eca', 'ECA247G1422' => 'eca', 'ECA247G1640' => 'eca', 'ECA247G1682' => 'eca', 'ECA247G1999' => 'eca', 'ECA247G2217' => 'eca', 'ECA247G2262' => 'eca', 'ECA247G2577' => 'eca', 'ECA247G2579' => 'eca', 'ECA247G2639' => 'eca', 'ECA247G2707' => 'eca', 'ECA247G2746' => 'eca', 'ECA247G2791' => 'eca', 'ECA247G2971' => 'eca', 'ECA247G2988' => 'eca', 'ECA247G3130' => 'eca', 'ECA247G3404' => 'eca', 'ECA247G3427' => 'eca', 'ECA247G3727' => 'eca', 'ECA247G3833' => 'eca', 'ECA247G3839' => 'eca', 'ECA247G3961' => 'eca', 'ECA247G4016' => 'eca', 'ECA248G0201' => 'eca', 'ECA248G0437' => 'eca', 'ECA248G0589' => 'eca', 'ECA248G0734' => 'eca', 'ECA248G1149' => 'eca', 'ECA248G1238' => 'eca', 'ECA248G1631' => 'eca', 'ECA248G1687' => 'eca', 'ECA248G1709' => 'eca', 'ECA248G2240' => 'eca', 'ECA248G2249' => 'eca', 'ECA248G2702' => 'eca', 'ECA248G3260' => 'eca', 'ECA248G3349' => 'eca', 'ECA248G3414' => 'eca', 'ECA248G3528' => 'eca', 'ECA248G3698' => 'eca', 'ECA248G3848' => 'eca', 'EL10Ac1g01376' => 'bvu', 'EL10Ac2g02647' => 'bvu', 'EL10Ac6g15080' => 'bvu', 'EL10Ac9g21154' => 'bvu', 'FAN02G2794' => 'fan', 'FAN02G4489' => 'fan', 'FAN04G0185' => 'fan', 'FAN05G4897' => 'fan', 'FAN12G0941' => 'fan', 'FAN12G2886' => 'fan', 'FAN25G2391' => 'fan', 'FAN27G0751' => 'fan', 'FvH4_1g20063' => 'fve', 'FvH4_2g15231' => 'fve', 'FvH4_3g04011' => 'fve', 'FvH4_3g28681' => 'fve', 'FvH4_3g42601' => 'fve', 'FvH4_4g01411' => 'fve', 'FvH4_4g10181' => 'fve', 'FvH4_4g15922' => 'fve', 'FvH4_4g16651' => 'fve', 'FvH4_4g16652' => 'fve', 'FvH4_5g13892' => 'fve', 'FvH4_5g13893' => 'fve', 'FvH4_5g20623' => 'fve', 'FvH4_5g25511' => 'fve', 'FvH4_6g12551' => 'fve', 'FvH4_6g12552' => 'fve', 'FvH4_7g04391' => 'fve', 'FvH4_7g19111' => 'fve', 'Gohir.D02G153950' => 'ghi', 'Gohir.D07G195440' => 'ghi', 'Gorai.004G152900' => 'gra', 'Gorai.005G173000' => 'gra', 'Gorai.006G065500' => 'gra', 'Gorai.007G053200' => 'gra', 'Gorai.008G062800' => 'gra', 'Gorai.009G169100' => 'gra', 'Gorai.010G106000' => 'gra', 'GSVIVG01023081001' => 'vvi', 'GSVIVG01023955001' => 'vvi', 'HanXRQChr00c1149g0578651' => 'han', 'HanXRQChr01g0005441' => 'han', 'HanXRQChr01g0018731' => 'han', 'HanXRQChr02g0034801' => 'han', 'HanXRQChr02g0049651' => 'han', 'HanXRQChr02g0049851' => 'han', 'HanXRQChr02g0049861' => 'han', 'HanXRQChr03g0060661' => 'han', 'HanXRQChr03g0067411' => 'han', 'HanXRQChr03g0069431' => 'han', 'HanXRQChr03g0069441' => 'han', 'HanXRQChr03g0071401' => 'han', 'HanXRQChr04g0121691' => 'han', 'HanXRQChr04g0128201' => 'han', 'HanXRQChr05g0151291' => 'han', 'HanXRQChr05g0154011' => 'han', 'HanXRQChr06g0181681' => 'han', 'HanXRQChr08g0215981' => 'han', 'HanXRQChr08g0216811' => 'han', 'HanXRQChr08g0232231' => 'han', 'HanXRQChr10g0301021' => 'han', 'HanXRQChr10g0304031' => 'han', 'HanXRQChr10g0311371' => 'han', 'HanXRQChr11g0329791' => 'han', 'HanXRQChr11g0331001' => 'han', 'HanXRQChr11g0331081' => 'han', 'HanXRQChr11g0343051' => 'han', 'HanXRQChr12g0360251' => 'han', 'HanXRQChr12g0378381' => 'han', 'HanXRQChr12g0378391' => 'han', 'HanXRQChr12g0378401' => 'han', 'HanXRQChr13g0412781' => 'han', 'HanXRQChr13g0412791' => 'han', 'HanXRQChr13g0420481' => 'han', 'HanXRQChr15g0467831' => 'han', 'HanXRQChr15g0483301' => 'han', 'HanXRQChr15g0489911' => 'han', 'HanXRQChr15g0491641' => 'han', 'HanXRQChr16g0514291' => 'han', 'HanXRQChr16g0527121' => 'han', 'HanXRQChr17g0548181' => 'han', 'HanXRQChr17g0552941' => 'han', 'HanXRQChr17g0555641' => 'han', 'HanXRQChr17g0557891' => 'han', 'Hma1.2p1_0001F.1_g001370' => 'hma', 'Hma1.2p1_0010F.1_g006400' => 'hma', 'Hma1.2p1_0013F.1_g008040' => 'hma', 'Hma1.2p1_0111F.1_g053590' => 'hma', 'Hma1.2p1_0179F.1_g079060' => 'hma', 'Hma1.2p1_0200F.1_g086095' => 'hma', 'Hma1.2p1_0271F.1_g108840' => 'hma', 'Hma1.2p1_0312F.1_g121360' => 'hma', 'Hma1.2p1_0319F.1_g123940' => 'hma', 'Hma1.2p1_0341F.1_g130500' => 'hma', 'Hma1.2p1_0353F.1_g133160' => 'hma', 'Hma1.2p1_0362F.1_g136030' => 'hma', 'Hma1.2p1_0498F.1_g166560' => 'hma', 'Hma1.2p1_0587F.1_g184310' => 'hma', 'Hma1.2p1_0587F.1_g184315' => 'hma', 'Hma1.2p1_0622F.1_g190870' => 'hma', 'Hma1.2p1_0627F.1_g191730' => 'hma', 'Hma1.2p1_0633F.1_g192730' => 'hma', 'Hma1.2p1_0638F.1_g193680' => 'hma', 'Hma1.2p1_0661F.1_g197880' => 'hma', 'Hma1.2p1_0961F.1_g241650' => 'hma', 'Hma1.2p1_1172F.1_g263670' => 'hma', 'Hma1.2p1_1175F.1_g264110' => 'hma', 'Hma1.2p1_1178F.1_g264410' => 'hma', 'Hma1.2p1_1258F.1_g270930' => 'hma', 'Hma1.2p1_1305F.1_g274530' => 'hma', 'Hma1.2p1_1319F.1_g275280' => 'hma', 'Hma1.2p1_1593F.1_g292530' => 'hma', 'Hma1.2p1_1979F.1_g309860' => 'hma', 'Hma1.2p1_1991F.1_g310200' => 'hma', 'Hma1.2p1_2393F.1_g321260' => 'hma', 'Hma1.2p1_2537F.1_g324080' => 'hma', 'Hma1.2p1_2644F.1_g325980' => 'hma', 'Hma1.2p1_2691F.1_g327000' => 'hma', 'Hma1.2p1_3533F.1_g336653' => 'hma', 'Hma1.2p1_3726F.1_g337390' => 'hma', 'Lj1P707T7' => 'lonja', 'Lj2P1073T48' => 'lonja', 'Lj3P1076T27' => 'lonja', 'Lj3P262T7' => 'lonja', 'Lj3P275T13' => 'lonja', 'Lj4g0005230' => 'lja', 'Lj4P0T9' => 'lonja', 'Lj5P603T32' => 'lonja', 'Lj8P301T8' => 'lonja', 'Lj9C298T5' => 'lonja', 'Lju110P2T4' => 'lonja', 'Lju3020P0T10' => 'lonja', 'Mapoly0002s0252' => 'mpo', 'Mapoly0005s0183' => 'mpo', 'Mapoly0006s0016' => 'mpo', 'Mapoly0007s0022' => 'mpo', 'Mapoly0010s0039' => 'mpo', 'Mapoly0014s0010' => 'mpo', 'Mapoly0014s0016' => 'mpo', 'Mapoly0020s0096' => 'mpo', 'Mapoly0052s0124' => 'mpo', 'Mapoly0054s0101' => 'mpo', 'Mapoly0055s0046' => 'mpo', 'Mapoly0060s0099' => 'mpo', 'Mapoly0138s0003' => 'mpo', 'MD05G1031400' => 'mdo', 'MD08G1164400' => 'mdo', 'MD10G1032900' => 'mdo', 'Medtr0156s0040' => 'mtr', 'Medtr0528s0010' => 'mtr', 'Medtr0632s0010' => 'mtr', 'Medtr1g012760' => 'mtr', 'Medtr1g030360' => 'mtr', 'Medtr1g043440' => 'mtr', 'Medtr1g057710' => 'mtr', 'Medtr1g071020' => 'mtr', 'Medtr1g080040' => 'mtr', 'Medtr1g094105' => 'mtr', 'Medtr1g099140' => 'mtr', 'Medtr2g023130' => 'mtr', 'Medtr2g030640' => 'mtr', 'Medtr2g055800' => 'mtr', 'Medtr2g090505' => 'mtr', 'Medtr2g461140' => 'mtr', 'Medtr3g074290' => 'mtr', 'Medtr3g116710' => 'mtr', 'Medtr4g033320' => 'mtr', 'Medtr4g057300' => 'mtr', 'Medtr4g100470' => 'mtr', 'Medtr4g116110' => 'mtr', 'Medtr4g120790' => 'mtr', 'Medtr5g032220' => 'mtr', 'Medtr5g046145' => 'mtr', 'Medtr5g046160' => 'mtr', 'Medtr5g072950' => 'mtr', 'Medtr5g072970' => 'mtr', 'Medtr5g073000' => 'mtr', 'Medtr6g026910' => 'mtr', 'Medtr6g042630' => 'mtr', 'Medtr6g081290' => 'mtr', 'Medtr6g464570' => 'mtr', 'Medtr7g010970' => 'mtr', 'Medtr7g056020' => 'mtr', 'Medtr7g065910' => 'mtr', 'Medtr8g020433' => 'mtr', 'Medtr8g028020' => 'mtr', 'Medtr8g037210' => 'mtr', 'Medtr8g103800' => 'mtr', 'Medtr8g107490' => 'mtr', 'Medtr8g465320' => 'mtr', 'Migut.D01883' => 'egut', 'Migut.D01884' => 'egut', 'Oeu006640.1' => 'oeu', 'Oeu017872.1' => 'oeu', 'Oeu024894.1' => 'oeu', 'Oeu024895.1' => 'oeu', 'Oeu028054.1' => 'oeu', 'Oeu033650.1' => 'oeu', 'Oeu035023.1' => 'oeu', 'Oeu035640.1' => 'oeu', 'Oeu041494.1' => 'oeu', 'Oeu051809.1' => 'oeu', 'Oeu053859.1' => 'oeu', 'Oeu054952.1' => 'oeu', 'Oeu055610.1' => 'oeu', 'Oeu058295.1' => 'oeu', 'Oeu064531.1' => 'oeu', 'Phvul.008G000100' => 'pvu', 'Pp3c10_5740' => 'ppa', 'Pp3c11_24740' => 'ppa', 'Pp3c19_17020' => 'ppa', 'Pp3c22_7520' => 'ppa', 'Pp3c23_16940' => 'ppa', 'Pp3c5_649' => 'ppa', 'Pp3c8_14950' => 'ppa', 'Pp3c9_25000' => 'ppa', 'Pp3c9_4470' => 'ppa', 'Prupe.3G240700' => 'ppe', 'Prupe.7G144600' => 'ppe', 'Psat6g027840' => 'psa', 'PSO013G0254' => 'pso', 'PSO017G0840' => 'pso', 'PSO017G1054' => 'pso', 'PSO017G2856' => 'pso', 'PSO017G3599' => 'pso', 'PSO017G5988' => 'pso', 'PSO017G6298' => 'pso', 'PSO017G6396' => 'pso', 'PSO063G0480' => 'pso', 'PSO063G0602' => 'pso', 'PSO063G0801' => 'pso', 'PSO063G1358' => 'pso', 'PSO063G1605' => 'pso', 'PSO063G2288' => 'pso', 'PSO063G3063' => 'pso', 'PSO063G3318' => 'pso', 'PSO063G3326' => 'pso', 'PSO063G3477' => 'pso', 'PSO063G4888' => 'pso', 'PSO063G5255' => 'pso', 'PSO063G5816' => 'pso', 'PSO063G7449' => 'pso', 'PSO063G7547' => 'pso', 'PSO067G0086' => 'pso', 'PSO081G0110' => 'pso', 'PSO081G0129' => 'pso', 'PSO081G0181' => 'pso', 'PSO144G0169' => 'pso', 'PSO161G0057' => 'pso', 'PSO170G0662' => 'pso', 'PSO170G1091' => 'pso', 'PSO170G2237' => 'pso', 'PSO170G3669' => 'pso', 'PSO170G3721' => 'pso', 'PSO210G0646' => 'pso', 'PSO210G1163' => 'pso', 'PSO210G1721' => 'pso', 'PSO210G1948' => 'pso', 'PSO210G1978' => 'pso', 'PSO210G2087' => 'pso', 'PSO210G3746' => 'pso', 'PSO210G4495' => 'pso', 'PSO210G6708' => 'pso', 'PSO210G7791' => 'pso', 'PSO250G0009' => 'pso', 'PSO339G0458' => 'pso', 'PSO339G0506' => 'pso', 'PSO339G2184' => 'pso', 'PSO339G5708' => 'pso', 'PSO339G5843' => 'pso', 'PSO356G0043' => 'pso', 'PSO357G0105' => 'pso', 'PSO384G0726' => 'pso', 'PSO384G1308' => 'pso', 'PSO384G1761' => 'pso', 'PSO384G2147' => 'pso', 'PSO384G2519' => 'pso', 'PSO384G4831' => 'pso', 'PSO386G0138' => 'pso', 'PSO386G0211' => 'pso', 'PSO386G0280' => 'pso', 'PSO407G0027' => 'pso', 'PSO421G0184' => 'pso', 'PSO421G0699' => 'pso', 'PSO423G0049' => 'pso', 'PSO447G0114' => 'pso', 'PSO478G2254' => 'pso', 'PSO478G2307' => 'pso', 'PSO478G4095' => 'pso', 'PSO478G4798' => 'pso', 'PSO541G2752' => 'pso', 'PSO541G3139' => 'pso', 'PSO541G3362' => 'pso', 'PSO541G4123' => 'pso', 'PSO541G4646' => 'pso', 'PSO541G4860' => 'pso', 'PSO541G5131' => 'pso', 'PSO541G5286' => 'pso', 'PSO541G6383' => 'pso', 'PSO569G0001' => 'pso', 'PSO585G0009' => 'pso', 'PSO591G0063' => 'pso', 'PSO591G0159' => 'pso', 'PSO591G0347' => 'pso', 'PSO675G0067' => 'pso', 'PSO675G1981' => 'pso', 'PSO675G2432' => 'pso', 'PSO675G3010' => 'pso', 'PSO675G3316' => 'pso', 'PSO675G4112' => 'pso', 'PSO675G4317' => 'pso', 'PSO675G4622' => 'pso', 'PSO675G4726' => 'pso', 'PSO675G6516' => 'pso', 'PSO675G6891' => 'pso', 'PSO675G7774' => 'pso', 'PSO675G8991' => 'pso', 'PSO703G0001' => 'pso', 'PSO724G0353' => 'pso', 'PSO724G0789' => 'pso', 'PSO724G0862' => 'pso', 'PSO724G0935' => 'pso', 'PSO724G1093' => 'pso', 'PSO724G1186' => 'pso', 'PSO729G0048' => 'pso', 'PSO729G0158' => 'pso', 'PSO729G0265' => 'pso', 'PSO761G0076' => 'pso', 'PSO761G0249' => 'pso', 'PSO761G0430' => 'pso', 'PSO761G0537' => 'pso', 'PSO765G0022' => 'pso', 'PSO782G0309' => 'pso', 'PSO782G3412' => 'pso', 'PSO782G3441' => 'pso', 'PSO782G4983' => 'pso', 'PSO782G5710' => 'pso', 'PSO782G5730' => 'pso', 'PSO801G0754' => 'pso', 'PSO832G0356' => 'pso', 'PSO832G1366' => 'pso', 'PSO832G1919' => 'pso', 'PSO832G2496' => 'pso', 'PSO832G2861' => 'pso', 'PSO832G3255' => 'pso', 'PSO832G4184' => 'pso', 'RcHm_v2.0_Chr1g0329481' => 'rch', 'RcHm_v2.0_Chr1g0341531' => 'rch', 'RcHm_v2.0_Chr3g0494701' => 'rch', 'RcHm_v2.0_Chr4g0385841' => 'rch', 'RcHm_v2.0_Chr6g0263001' => 'rch', 'RcHm_v2.0_Chr7g0193111' => 'rch', 'RcHm_v2.0_Chr7g0206281' => 'rch', 'RcHm_v2.0_Chr7g0206311' => 'rch', 'Rhsim01G0017600' => 'rsi', 'Rhsim01G0218200' => 'rsi', 'Rhsim02G0175500' => 'rsi', 'Rhsim03G0114700' => 'rsi', 'Rhsim04G0198300' => 'rsi', 'Rhsim06G0070800' => 'rsi', 'Rhsim06G0076500' => 'rsi', 'Rhsim06G0076600' => 'rsi', 'Rhsim06G0117200' => 'rsi', 'Rhsim07G0040700' => 'rsi', 'Rhsim07G0193000' => 'rsi', 'Rhsim08G0145700' => 'rsi', 'Rhsim09G0113400' => 'rsi', 'Rhsim13G0144200' => 'rsi', 'RhsimUnG0244500' => 'rsi', 'SGA_v2.0_scaffold106G30618' => 'sas', 'SGA_v2.0_scaffold111G31517' => 'sas', 'SGA_v2.0_scaffold1233G53877' => 'sas', 'SGA_v2.0_scaffold126G33866' => 'sas', 'SGA_v2.0_scaffold17G08149' => 'sas', 'SGA_v2.0_scaffold1G00721' => 'sas', 'SGA_v2.0_scaffold22G09752' => 'sas', 'SGA_v2.0_scaffold31G12776' => 'sas', 'TAR485G0006' => 'tar', 'Thecc.10G090200' => 'tca', 'TPR.G18522' => 'tpr', 'TPR.G20851' => 'tpr', 'TPR.G24635' => 'tpr', 'TPR.G25714' => 'tpr', 'TPR.G27327' => 'tpr', 'TPR.G27988' => 'tpr', 'TPR.G28618' => 'tpr', 'TPR.G29741' => 'tpr', 'TPR.G36292' => 'tpr', 'TPR.G8671' => 'tpr', 'TWI09G0326' => 'twi', 'TWI09G0669' => 'twi', 'TWI09G0942' => 'twi', 'TWI09G1129' => 'twi', 'TWI09G1411' => 'twi', 'TWI12G0007' => 'twi', 'TWI12G0185' => 'twi', 'TWI12G0364' => 'twi', 'TWI12G0556' => 'twi', 'TWI12G0648' => 'twi', 'TWI12G1095' => 'twi', 'TWI12G1212' => 'twi', 'TWI14G0423' => 'twi', 'TWI14G0920' => 'twi', 'TWI14G0929' => 'twi', 'TWI14G1128' => 'twi', 'TWI15G0719' => 'twi', 'TWI15G0761' => 'twi', 'TWI15G0932' => 'twi', 'TWI15G1013' => 'twi', 'TWI15G1107' => 'twi', 'TWI15G1236' => 'twi', 'TWI18G0139' => 'twi', 'TWI18G1400' => 'twi', 'TWI23G0100' => 'twi', 'TWI23G0346' => 'twi', 'TWI23G0946' => 'twi', 'TWI23G0960' => 'twi', 'TWI31G0075' => 'twi', 'TWI31G0510' => 'twi', 'TWI31G0531' => 'twi', 'TWI31G0828' => 'twi', 'TWI31G1191' => 'twi', 'TWI32G0102' => 'twi', 'TWI32G0254' => 'twi', 'TWI32G0292' => 'twi', 'TWI32G0502' => 'twi', 'TWI32G0746' => 'twi', 'TWI32G1239' => 'twi', 'TWI32G1282' => 'twi', 'TWI34G1957' => 'twi', 'TWI36G0859' => 'twi', 'TWI36G0901' => 'twi', 'TWI36G0949' => 'twi', 'TWI36G1214' => 'twi', 'TWI36G1372' => 'twi', 'TWI36G1645' => 'twi', 'TWI36G1700' => 'twi', 'TWI38G0080' => 'twi', 'TWI38G0094' => 'twi', 'TWI38G0215' => 'twi', 'TWI38G0345' => 'twi', 'TWI38G0853' => 'twi', 'TWI38G0987' => 'twi', 'TWI38G1252' => 'twi', 'TWI38G2130' => 'twi', 'TWI38G2358' => 'twi', 'TWI53G0239' => 'twi', 'TWI53G1229' => 'twi', 'TWI56G0390' => 'twi', 'TWI56G0399' => 'twi', 'TWI56G0914' => 'twi', 'TWI56G0917' => 'twi', 'TWI56G0970' => 'twi', 'TWI56G1041' => 'twi', 'TWI56G1244' => 'twi', 'TWI56G1292' => 'twi', 'TWI59G0356' => 'twi', 'TWI59G0448' => 'twi', 'TWI59G0546' => 'twi', 'TWI59G1088' => 'twi', 'TWI59G1113' => 'twi', 'TWI59G1482' => 'twi', 'TWI60G0828' => 'twi', 'TWI60G1423' => 'twi', 'TWI63G0001' => 'twi', 'TWI63G0566' => 'twi', 'TWI63G0623' => 'twi', 'TWI63G0793' => 'twi', 'TWI63G0981' => 'twi', 'TWI63G1156' => 'twi', 'TWI63G1264' => 'twi', 'TWI63G1393' => 'twi', 'TWI73G0077' => 'twi', 'TWI73G0096' => 'twi', 'TWI73G0171' => 'twi', 'TWI73G0339' => 'twi', 'TWI73G0387' => 'twi', 'TWI73G0826' => 'twi', 'TWI73G1073' => 'twi', 'TWI74G1657' => 'twi', 'TWI75G0252' => 'twi', 'TWI75G0592' => 'twi', 'TWI75G0671' => 'twi', 'TWI75G0858' => 'twi', 'TWI75G1081' => 'twi', 'TWI75G1234' => 'twi', 'TWI75G1511' => 'twi', 'TWI75G1627' => 'twi', 'TWI75G1686' => 'twi', 'TWI77G0084' => 'twi', 'TWI77G0183' => 'twi', 'TWI77G0255' => 'twi', 'TWI77G0477' => 'twi', 'TWI77G0480' => 'twi', 'TWI77G0651' => 'twi', 'TWI79G0011' => 'twi', 'TWI79G0388' => 'twi', 'TWI79G0990' => 'twi', 'TWI79G1065' => 'twi', 'TWI79G1376' => 'twi', 'TWI81G0284' => 'twi', 'TWI81G0336' => 'twi', 'TWI81G0406' => 'twi', 'TWI81G0755' => 'twi', 'TWI81G1065' => 'twi', 'vmacro01404' => 'vma', 'vmacro04438' => 'vma', 'vmacro10179' => 'vma', 'vmacro10473' => 'vma', 'vmacro10973' => 'vma', 'vmacro14527' => 'vma', 'vmacro15724' => 'vma', 'vmacro19662' => 'vma', 'vmacro21289' => 'vma', 'VMungo0331G0649' => 'vmu', 'VMungo0464G0025' => 'vmu' ) $gf_id = 'HOM05D000593' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000593' ) $data_identifier = 'HOM05D000593' $data_type = 'gf_id' $species_gene_counts = array( 'amhyb' => (int) 1, 'aox' => (int) 24, 'acertr' => (int) 25, 'cqu' => (int) 1, 'cansat' => (int) 3, 'car' => (int) 60, 'camsi' => (int) 35, 'din' => (int) 1, 'eca' => (int) 277, 'bvu' => (int) 4, 'fan' => (int) 8, 'fve' => (int) 18, 'ghi' => (int) 2, 'gra' => (int) 7, 'vvi' => (int) 2, 'han' => (int) 44, 'hma' => (int) 36, 'lonja' => (int) 11, 'lja' => (int) 1, 'mpo' => (int) 13, 'mdo' => (int) 3, 'mtr' => (int) 42, 'egut' => (int) 2, 'oeu' => (int) 15, 'pvu' => (int) 1, 'ppa' => (int) 9, 'ppe' => (int) 2, 'psa' => (int) 1, 'pso' => (int) 126, 'rch' => (int) 8, 'rsi' => (int) 15, 'sas' => (int) 8, 'tar' => (int) 1, 'tca' => (int) 1, 'tpr' => (int) 10, 'twi' => (int) 116, 'vma' => (int) 9, 'vmu' => (int) 2 ) $gf_gene_species = 'vmu' $gf_gene_id = 'VMungo0464G0025' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1