Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23527 Vaccinium macrocarpon HOM05D008165 ORTHO05D007516 8.2e-38 161.0 84 100.0
Rhsim03G0252900 Rhododendron simsii HOM05D008165 ORTHO05D007516 8.2e-30 134.4 86 84.9
Hma1.2p1_0343F.1_g130780 Hydrangea macrophylla HOM05D008165 ORTHO05D007516 4.7e-17 92.0 83 59.0
GSVIVG01012854001 Vitis vinifera HOM05D008165 ORTHO05D007516 1.8e-16 90.1 85 60.0
Sopen12g004750 Solanum pennellii HOM05D008165 ORTHO05D007516 9.1e-13 77.8 87 50.6
TAR673G0004 Trochodendron aralioides HOM05D008165 ORTHO05D007516 9.1e-13 77.8 85 52.9
Lj9A703T45 Lonicera japonica HOM05D008165 ORTHO05D007516 1.2e-12 77.4 77 57.1
PGSC0003DMG400007836 Solanum tuberosum HOM05D008165 ORTHO05D007516 2.7e-12 76.3 87 51.7
QL02p090702 Quercus lobata HOM05D008165 ORTHO05D007516 3.5e-12 75.9 66 53.0
Solyc12g009860.3 Solanum lycopersicum HOM05D008165 ORTHO05D007516 3.5e-12 75.9 87 50.6
TAR383G0642 Trochodendron aralioides HOM05D008165 ORTHO05D007516 3.5e-12 75.9 83 53.0
Nitab4.5_0008536g0060 Nicotiana tabacum HOM05D008165 ORTHO05D007516 1.7e-11 73.6 83 50.6
Cfa002265 Carpinus fangiana HOM05D008165 ORTHO05D007516 2.9e-11 72.8 79 51.9
TAR626G1841 Trochodendron aralioides HOM05D008165 ORTHO05D007516 5.0e-11 72.0 80 52.5
Atru.chr7.2009 Acer truncatum HOM05D008165 ORTHO05D007516 1.1e-10 70.9 84 47.6
Oeu058579.1 Olea europaea HOM05D008165 ORTHO05D007516 1.1e-10 70.9 89 50.6
TAR625G0094 Trochodendron aralioides HOM05D008165 ORTHO05D007516 1.1e-10 70.9 78 52.6
Dinv38142 Davidia involucrata HOM05D008165 ORTHO05D007516 1.5e-10 70.5 82 48.8
Duzib150G0960 Durio zibethinus HOM05D008165 ORTHO05D007516 1.5e-10 70.5 83 45.8
Manes.14G119100 Manihot esculenta HOM05D008165 ORTHO05D007516 1.5e-10 70.5 84 47.6
Duzib168G0348 Durio zibethinus HOM05D008165 ORTHO05D007516 2.5e-10 69.7 67 50.7
RcHm_v2.0_Chr2g0087101 Rosa chinensis HOM05D008165 ORTHO05D007516 3.2e-10 69.3 67 50.7
Ah.14g079050 Amaranthus hybridus HOM05D008165 ORTHO05D007516 7.2e-10 68.2 87 47.1
Oeu055936.1 Olea europaea HOM05D008165 ORTHO05D007516 9.4e-10 67.8 89 48.3
FAN23G0205 Fragaria x ananassa HOM05D008165 ORTHO05D007516 1.2e-09 67.4 67 47.8
Cc06_g07690 Coffea canephora HOM05D008165 ORTHO05D007516 1.6e-09 67.0 83 50.6
Hund21593 Selenicereus undatus HOM05D008165 ORTHO05D007516 1.6e-09 67.0 84 44.0
Gohir.A05G013100 Gossypium hirsutum HOM05D008165 ORTHO05D007516 2.7e-09 66.2 64 50.0
FvH4_1g02080 Fragaria vesca HOM05D008165 ORTHO05D007516 3.6e-09 65.9 62 51.6
FAN19G0448 Fragaria x ananassa HOM05D008165 ORTHO05D007516 3.6e-09 65.9 62 51.6
CSS0041528 Camellia sinensis var. sinensis HOM05D008165 ORTHO05D007516 4.7e-09 65.5 44 68.2
CAN.G467.3 Capsicum annuum HOM05D013625 ORTHO05D007516 4.7e-09 65.5 104 42.3
Thecc.09G137200 Theobroma cacao HOM05D008165 ORTHO05D007516 4.7e-09 65.5 84 46.4
Gohir.D05G014200 Gossypium hirsutum HOM05D008165 ORTHO05D007516 6.1e-09 65.1 66 48.5
Actinidia13954 Actinidia chinensis HOM05D008165 ORTHO05D007516 1.0e-08 64.3 48 64.6
Duzib187G0069 Durio zibethinus HOM05D008165 ORTHO05D007516 1.0e-08 64.3 83 44.6
Gorai.009G014200 Gossypium raimondii HOM05D008165 ORTHO05D007516 1.0e-08 64.3 65 49.2
Nn8g39643 Nelumbo nucifera HOM05D008165 ORTHO05D007516 1.0e-08 64.3 84 44.0
FAN26G1249 Fragaria x ananassa HOM05D008165 ORTHO05D007516 1.4e-08 63.9 67 46.3
MD02G1018600 Malus domestica HOM05D008165 ORTHO05D007516 1.4e-08 63.9 67 46.3
MD15G1162600 Malus domestica HOM05D008165 ORTHO05D007516 1.8e-08 63.5 71 47.9
Manes.06G044400 Manihot esculenta HOM05D008165 ORTHO05D007516 3.0e-08 62.8 88 44.3
HanXRQChr06g0180411 Helianthus annuus HOM05D021640 ORTHO05D007516 4.0e-08 62.4 87 50.6
Prupe.7G252200 Prunus persica HOM05D008165 ORTHO05D007516 4.0e-08 62.4 70 45.7
Glyma.13G163302 Glycine max HOM05D008165 ORTHO05D007516 6.8e-08 61.6 68 52.9
MELO3C004482.2 Cucumis melo HOM05D008165 ORTHO05D007516 8.8e-08 61.2 68 47.1
ClCG11G003490 Citrullus lanatus HOM05D008165 ORTHO05D007516 1.2e-07 60.8 76 43.4
CsaV3_2G003360 Cucumis sativus L. HOM05D008165 ORTHO05D007516 1.5e-07 60.5 68 45.6
Glyma.17G107800 Glycine max HOM05D013093 ORTHO05D007516 1.5e-07 60.5 65 52.3
ClCG11G003470 Citrullus lanatus HOM05D008165 ORTHO05D007516 3.4e-07 59.3 68 41.2
Hund09307 Selenicereus undatus HOM05D008165 ORTHO05D007516 3.4e-07 59.3 63 46.0
MELO3C004479.2 Cucumis melo HOM05D008165 ORTHO05D007516 7.5e-07 58.2 69 39.1
Nitab4.5_0007621g0020 Nicotiana tabacum HOM05D013625 ORTHO05D007516 9.8e-07 57.8 92 42.4
Sabra06G0201600 Salix brachista HOM05D009923 ORTHO05D007516 1.7e-06 57.0 84 39.3
Migut.J01244 Erythranthe guttata HOM05D008165 ORTHO05D007516 2.2e-06 56.6 88 39.8
FAN28G1178 Fragaria x ananassa HOM05D008165 ORTHO05D007516 2.2e-06 56.6 86 38.4
CsaV3_2G003340 Cucumis sativus L. HOM05D008165 ORTHO05D007516 3.7e-06 55.8 67 38.8
Glyma.17G107600 Glycine max HOM05D008165 ORTHO05D007516 3.7e-06 55.8 66 48.5
Dinv15868 Davidia involucrata HOM05D009923 ORTHO05D007516 4.9e-06 55.5 82 41.5


User provided reference genes

Program Settings