Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 5.1e-154 547.7 282 100.0
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 1.7e-64 250.4 154 83.8
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 7.0e-63 245.0 154 81.2
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 2.7e-62 243.0 154 81.2
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 6.6e-61 238.4 154 80.5
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 3.6e-59 232.6 157 77.7
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 1.4e-55 220.7 154 74.0
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 6.0e-54 215.3 154 70.8
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.6e-49 199.9 157 66.2
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 4.4e-49 199.1 156 67.3
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 1.3e-48 197.6 155 68.4
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 1.7e-48 197.2 155 68.4
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 1.7e-48 197.2 189 58.7
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 2.2e-48 196.8 154 68.8
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 3.7e-48 196.1 156 66.0
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 4.9e-48 195.7 156 66.0
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 6.4e-48 195.3 151 65.6
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 8.4e-48 194.9 157 68.2
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 5.4e-47 192.2 152 63.8
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 5.4e-47 192.2 152 67.1
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 1.2e-46 191.0 145 66.9
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 7.8e-46 188.3 156 64.7
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 1.7e-45 187.2 150 66.0
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 2.3e-45 186.8 152 63.8
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 3.9e-45 186.0 152 63.8
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 8.6e-45 184.9 157 59.9
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 1.1e-44 184.5 156 62.8
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 7.3e-44 181.8 167 58.1
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.2e-43 181.0 155 59.4
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.2e-43 181.0 152 62.5
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 1.6e-43 180.6 155 62.6
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 1.6e-43 180.6 155 62.6
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 1.6e-43 180.6 150 66.7
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 2.1e-43 180.3 156 61.5
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 4.7e-43 179.1 155 61.9
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 4.7e-43 179.1 152 61.8
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 6.2e-43 178.7 150 66.0
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 8.1e-43 178.3 156 59.0
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 1.4e-42 177.6 156 59.6
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.1e-42 176.4 157 57.3
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 2.0e-41 173.7 145 61.4
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 4.4e-41 172.6 154 60.4
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 1.3e-40 171.0 156 57.1
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.2e-40 170.2 154 58.4
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 2.9e-40 169.9 133 66.9
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 3.8e-40 169.5 154 56.5
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 3.8e-40 169.5 154 59.1
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 4.9e-40 169.1 152 58.6
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 8.4e-40 168.3 154 57.8
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 1.1e-39 167.9 168 57.1
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 1.4e-39 167.5 156 55.8
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 4.2e-39 166.0 154 57.8
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 4.2e-39 166.0 156 57.1
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 5.4e-39 165.6 154 57.1
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 5.4e-39 165.6 155 57.4
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 9.3e-39 164.9 154 56.5
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 1.2e-38 164.5 154 56.5
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 2.1e-38 163.7 138 63.0
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 2.1e-38 163.7 155 56.8
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 2.1e-38 163.7 148 60.1
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 4.6e-38 162.5 183 50.8
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 4.6e-38 162.5 150 58.7
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 7.8e-38 161.8 154 54.5
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 1.3e-37 161.0 144 55.6
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 1.3e-37 161.0 155 54.8
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 1.3e-37 161.0 154 55.2
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 1.7e-37 160.6 145 57.2
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 2.3e-37 160.2 156 53.8
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 3.9e-37 159.5 154 54.5
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 3.9e-37 159.5 154 54.5
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 6.6e-37 158.7 155 55.5
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 6.6e-37 158.7 145 60.0
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 1.5e-36 157.5 155 54.2
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 1.9e-36 157.1 156 53.2
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 2.5e-36 156.8 158 53.2
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 2.5e-36 156.8 158 53.2
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 4.3e-36 156.0 156 55.1
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 7.3e-36 155.2 147 56.5
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 1.6e-35 154.1 157 53.5
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 3.6e-35 152.9 156 55.1
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 8.1e-35 151.8 183 49.2
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 1.1e-34 151.4 152 52.6
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 1.8e-34 150.6 155 53.5
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 4.0e-34 149.4 137 60.6
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 9.0e-34 148.3 156 52.6
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 1.2e-33 147.9 145 56.6
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 1.5e-33 147.5 156 53.2
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 2.0e-33 147.1 140 57.9
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 2.6e-33 146.7 139 59.0
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 2.6e-33 146.7 156 54.5
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 3.4e-33 146.4 109 74.3
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 3.4e-33 146.4 142 51.4
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 3.4e-33 146.4 158 51.9
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 4.4e-33 146.0 155 54.2
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 4.4e-33 146.0 156 51.3
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 1.3e-32 144.4 155 54.2
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 3.8e-32 142.9 160 50.0
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.1e-31 141.4 199 44.2
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.4e-31 141.0 115 60.9
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.4e-31 141.0 155 51.6
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 5.4e-31 139.0 191 45.5
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 1.6e-30 137.5 140 51.4
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 2.7e-30 136.7 142 52.1
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 3.5e-30 136.3 156 49.4
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 4.6e-30 136.0 148 52.0
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 6.0e-30 135.6 149 48.3
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 7.9e-30 135.2 155 49.0
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 1.7e-29 134.0 142 48.6
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 1.7e-29 134.0 144 51.4
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 1.7e-29 134.0 144 51.4
Rhsim10G0196100 Rhododendron simsii HOM05D004607 ORTHO05D005836 8.7e-29 131.7 112 71.4
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.1e-28 131.3 200 43.0
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.5e-28 131.0 139 51.1
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 1.9e-28 130.6 146 50.7
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 9.6e-28 128.3 170 46.5
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 2.8e-27 126.7 108 59.3
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 3.6e-27 126.3 154 52.6
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 2.4e-26 123.6 137 51.1
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 3.1e-26 123.2 135 48.9
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 9.0e-26 121.7 157 45.9
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 1.5e-25 120.9 111 61.3
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 2.0e-25 120.6 119 57.1
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 2.6e-25 120.2 155 45.8
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 4.5e-25 119.4 157 45.2
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 1.3e-24 117.9 110 56.4
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 1.3e-24 117.9 135 45.9
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 1.7e-24 117.5 131 50.4
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 2.9e-24 116.7 102 56.9
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 1.4e-23 114.4 154 43.5
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 3.2e-23 113.2 175 42.3
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 3.2e-23 113.2 147 47.6
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 1.0e-21 108.2 252 32.9
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 1.3e-19 101.3 86 66.3
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 4.0e-18 96.3 68 64.7
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 1.5e-17 94.4 86 62.8
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 4.5e-17 92.8 81 64.2
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 3.8e-16 89.7 81 61.7
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 3.8e-16 89.7 76 69.7
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 3.8e-16 89.7 154 37.0
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.4e-15 87.8 83 59.0
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 1.4e-15 87.8 112 51.8
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 3.2e-15 86.7 93 53.8
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 4.2e-15 86.3 89 58.4
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 6.0e-14 82.4 61 54.1
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 2.1e-11 73.9 131 37.4
Cpa.g.sc117.83 Carica papaya HOM05D004607 ORTHO05D005836 4.8e-11 72.8 60 65.0
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 2.6e-09 67.0 124 32.3
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 5.9e-09 65.9 145 31.7
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 6.5e-08 62.4 51 68.6
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 7.2e-07 58.9 69 49.3
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 2.1e-06 57.4 96 39.6


User provided reference genes

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