Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 1.1e-181 639.8 309 100.0
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 1.5e-154 549.7 326 81.9
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 4.6e-140 501.5 279 84.2
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 5.6e-130 468.0 290 76.9
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 2.4e-117 426.0 278 71.6
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 1.1e-114 417.2 278 71.6
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 5.3e-112 408.3 288 67.4
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 6.9e-112 407.9 255 76.9
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 6.9e-112 407.9 278 69.4
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 4.5e-111 405.2 276 70.3
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 9.9e-111 404.1 278 67.3
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 3.8e-110 402.1 281 66.9
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 4.9e-110 401.7 282 69.1
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 1.1e-109 400.6 277 67.9
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.9e-109 399.8 277 67.9
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 5.4e-109 398.3 277 67.1
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 1.6e-108 396.7 280 67.1
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 1.6e-108 396.7 277 66.4
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 3.5e-108 395.6 284 66.9
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 3.5e-108 395.6 282 68.1
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.3e-107 393.7 277 67.5
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 5.1e-107 391.7 274 68.2
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 5.1e-107 391.7 280 65.7
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 8.7e-107 391.0 288 65.6
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 1.9e-106 389.8 280 65.0
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 3.3e-106 389.0 284 65.5
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 5.6e-106 388.3 284 66.2
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 7.4e-106 387.9 289 65.7
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 7.4e-106 387.9 278 64.4
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 1.3e-105 387.1 279 70.6
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 1.3e-105 387.1 278 64.7
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 1.6e-105 386.7 280 66.1
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 4.8e-105 385.2 284 65.5
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 6.2e-105 384.8 287 64.1
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 8.1e-105 384.4 280 66.1
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 5.3e-104 381.7 253 71.5
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 5.3e-104 381.7 284 65.1
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 1.2e-103 380.6 272 65.8
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 1.2e-103 380.6 272 67.3
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 1.2e-103 380.6 278 64.7
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 2.0e-103 379.8 278 66.9
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 3.4e-103 379.0 277 67.1
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 4.5e-103 378.6 280 65.4
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 4.5e-103 378.6 288 62.8
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 5.8e-103 378.3 278 65.1
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 4.9e-102 375.2 291 60.8
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 1.4e-101 373.6 279 63.4
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 1.9e-101 373.2 288 64.2
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 2.5e-101 372.9 288 62.2
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 7.1e-101 371.3 279 63.4
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 9.3e-101 370.9 278 62.6
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 1.6e-100 370.2 281 64.4
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 2.1e-100 369.8 286 63.6
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 5.1e-99 365.2 287 60.6
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 9.6e-98 360.9 275 63.3
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 2.1e-97 359.8 298 60.1
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 2.8e-97 359.4 296 62.5
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 1.1e-96 357.5 288 60.1
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 1.4e-96 357.1 309 58.6
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 3.1e-96 355.9 295 62.4
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 4.1e-96 355.5 237 71.7
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 6.9e-96 354.8 287 60.3
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 9.0e-96 354.4 287 59.2
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 2.6e-95 352.8 315 60.6
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 1.3e-94 350.5 289 63.3
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 1.3e-94 350.5 283 61.5
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 1.3e-94 350.5 287 59.6
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 1.7e-94 350.1 273 61.2
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 2.2e-94 349.7 273 61.5
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 9.3e-93 344.4 278 59.7
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 1.0e-91 340.9 281 61.6
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 1.3e-91 340.5 300 58.7
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 3.0e-91 339.3 287 57.8
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 8.7e-91 337.8 297 59.3
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 1.1e-90 337.4 287 57.5
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 2.5e-90 336.3 288 56.9
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 5.7e-90 335.1 287 56.4
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 1.4e-88 330.5 295 55.3
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 9.0e-88 327.8 278 58.3
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 1.0e-86 324.3 288 57.6
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 3.9e-83 312.4 278 56.5
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 3.9e-83 312.4 211 67.8
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 5.1e-83 312.0 288 55.2
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 5.1e-83 312.0 288 55.2
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 1.5e-82 310.5 287 55.4
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 3.7e-81 305.8 291 55.0
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 1.4e-80 303.9 277 57.4
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 1.3e-78 297.4 280 51.8
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 5.5e-77 292.0 205 66.3
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 2.2e-73 280.0 288 50.7
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 1.3e-70 270.8 286 49.7
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.8e-59 233.8 158 74.1
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 4.8e-57 225.7 162 64.8
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 2.0e-55 220.3 307 42.0
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 5.9e-55 218.8 301 41.2
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.6e-52 210.7 168 65.5
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 1.0e-51 208.0 301 39.2
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 2.2e-41 173.7 288 35.8
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 1.4e-40 171.0 220 43.2
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.8e-35 154.1 127 63.0
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 4.0e-35 152.9 285 32.3
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 9.2e-32 141.7 147 53.1
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 5.0e-30 136.0 102 60.8
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 4.3e-29 132.9 89 74.2
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 6.8e-27 125.6 80 73.8
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.0e-26 124.0 132 52.3
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 7.3e-21 105.5 199 32.7
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 2.7e-15 87.0 277 26.0


User provided reference genes

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