Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 0.0e+00 1117.8 672 100.0
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 0.0e+00 1104.7 695 96.7
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 5.0e-176 622.1 611 65.6
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 1.1e-90 338.6 701 36.9
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 2.3e-75 287.7 538 39.8
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 8.3e-70 269.2 679 34.2
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 1.4e-61 241.9 772 33.9
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 4.6e-60 236.9 684 30.4
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 7.3e-58 229.6 703 30.0
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 1.1e-56 225.7 674 30.9
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.6e-55 221.1 700 29.4
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 2.6e-55 221.1 683 31.6
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 1.7e-54 218.4 621 31.7
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 2.9e-54 217.6 603 32.3
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 3.7e-54 217.2 681 30.0
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 3.0e-51 207.6 677 30.4
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 8.6e-51 206.1 683 29.6
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 4.3e-50 203.8 678 28.3
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 5.6e-50 203.4 716 28.9
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.1e-48 199.1 678 29.8
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 2.6e-47 194.5 717 29.3
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 9.9e-47 192.6 696 29.9
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.8e-46 190.7 691 29.5
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 8.4e-46 189.5 669 27.8
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.9e-45 188.3 680 29.1
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 7.1e-45 186.4 676 28.0
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 1.6e-44 185.3 682 28.7
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.1e-44 184.9 721 27.7
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.0e-43 182.6 533 31.5
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.7e-43 181.8 704 29.0
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.3e-43 181.4 699 27.9
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.5e-42 177.9 680 28.5
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.6e-41 175.3 701 27.0
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 8.1e-41 172.9 700 27.9
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 3.1e-40 171.0 690 27.5
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.6e-39 167.9 170 54.7
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 3.4e-39 167.5 333 37.5
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 3.4e-39 167.5 674 26.3
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 7.6e-39 166.4 582 29.7
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 1.7e-38 165.2 686 25.9
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 2.2e-38 164.9 692 29.8
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 4.9e-38 163.7 359 36.8
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.9e-37 161.8 162 53.7
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 1.6e-36 158.7 178 51.7
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 1.0e-35 156.0 680 29.6
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 1.3e-35 155.6 673 30.3
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 3.9e-35 154.1 779 29.0
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 6.6e-35 153.3 368 35.1
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 5.6e-34 150.2 333 34.8
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.3e-33 149.1 678 29.9
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.3e-33 149.1 181 48.6
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.1e-32 146.0 712 25.6
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.1e-32 146.0 141 60.3
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 5.3e-32 143.7 264 38.3
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.2e-31 142.5 689 25.3
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 2.6e-31 141.4 827 24.4
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 4.5e-31 140.6 138 58.0
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.8e-31 140.2 148 55.4
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.7e-30 138.7 356 31.5
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 1.7e-30 138.7 153 49.0
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 2.2e-30 138.3 387 32.0
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 2.9e-30 137.9 799 24.4
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 2.9e-30 137.9 716 24.9
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 3.8e-30 137.5 148 50.7
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 4.2e-29 134.0 374 33.2
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 4.2e-29 134.0 350 34.3
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.2e-28 132.5 201 43.8
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 7.9e-28 129.8 142 50.0
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.8e-27 128.6 249 36.5
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 3.0e-27 127.9 679 26.4
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 3.9e-27 127.5 147 46.9
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 5.1e-27 127.1 362 32.0
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 5.1e-27 127.1 376 34.0
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 6.7e-27 126.7 753 24.3
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 2.5e-26 124.8 138 50.0
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.8e-24 118.6 239 36.4
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 4.0e-24 117.5 403 30.0
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 2.0e-23 115.2 238 37.0
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 5.8e-23 113.6 728 23.6
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 5.8e-23 113.6 229 39.3
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.9e-21 108.6 132 45.5
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 4.2e-21 107.5 325 31.7
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 7.1e-21 106.7 668 24.3
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 1.2e-20 105.9 141 42.6
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 2.1e-20 105.1 231 34.2
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 2.1e-20 105.1 235 34.0
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 3.5e-20 104.4 235 33.2
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 4.6e-20 104.0 163 39.9
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 1.0e-19 102.8 235 32.8
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 1.8e-19 102.1 165 40.6
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 3.0e-19 101.3 170 37.6
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 3.3e-18 97.8 617 22.4
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 2.1e-17 95.1 148 37.2
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 3.7e-17 94.4 136 41.9
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 6.2e-17 93.6 242 33.1
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 8.2e-17 93.2 189 35.4
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 8.2e-17 93.2 189 35.4
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 1.8e-16 92.0 314 29.0
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 9.0e-16 89.7 246 32.9
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 1.5e-15 89.0 253 29.6
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 3.4e-15 87.8 127 35.4
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 3.4e-15 87.8 119 40.3
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 7.6e-15 86.7 161 36.6
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 4.9e-14 84.0 135 34.8
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 1.2e-12 79.3 140 36.4
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 1.6e-12 79.0 64 56.2
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 1.6e-12 79.0 129 32.6
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 2.7e-12 78.2 110 39.1
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 2.3e-11 75.1 238 29.0
Sc18g0002050 Simmondsia chinensis HOM05D006771 ORTHO05D008296 8.2e-09 66.6 116 37.9
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 1.4e-08 65.9 73 45.2


User provided reference genes

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