Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 8.3e-40 167.2 125 100.0
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 7.0e-15 84.3 48 77.1
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 1.2e-14 83.6 45 80.0
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.6e-14 83.2 48 77.1
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 6.0e-14 81.3 48 72.9
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.3e-13 80.1 46 78.3
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.7e-13 79.7 48 72.9
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.7e-13 79.7 48 77.1
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.3e-13 79.3 44 75.0
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.3e-13 79.3 44 77.3
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 2.3e-13 79.3 46 76.1
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.3e-13 79.3 46 76.1
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 3.0e-13 79.0 44 77.3
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 3.9e-13 78.6 43 81.4
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 3.9e-13 78.6 48 70.8
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 3.9e-13 78.6 43 81.4
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.9e-13 78.6 48 68.8
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.9e-13 78.6 46 76.1
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 5.1e-13 78.2 48 68.8
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 5.1e-13 78.2 48 68.8
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 5.1e-13 78.2 44 79.5
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.6e-13 77.8 46 73.9
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 6.6e-13 77.8 48 70.8
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 8.6e-13 77.4 44 77.3
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.6e-13 77.4 44 79.5
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.1e-12 77.0 48 68.8
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.1e-12 77.0 44 75.0
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 1.5e-12 76.6 48 68.8
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.5e-12 76.6 46 71.7
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.5e-12 76.6 46 71.7
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.5e-12 76.6 48 66.7
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.5e-12 76.6 87 66.7
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 1.9e-12 76.3 48 66.7
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.9e-12 76.3 48 68.8
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.9e-12 76.3 44 72.7
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.5e-12 75.9 48 64.6
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.5e-12 75.9 46 71.7
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.5e-12 75.9 48 68.8
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 4.3e-12 75.1 46 71.7
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.3e-12 75.1 48 68.8
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 5.6e-12 74.7 45 73.3
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 7.3e-12 74.3 44 70.5
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 7.3e-12 74.3 86 70.9
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 7.3e-12 74.3 46 71.7
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 9.5e-12 73.9 44 72.7
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 9.5e-12 73.9 48 68.8
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 9.5e-12 73.9 87 74.7
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 1.2e-11 73.6 44 68.2
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.6e-11 73.2 44 72.7
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.6e-11 73.2 44 72.7
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 1.6e-11 73.2 44 70.5
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-11 73.2 48 62.5
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 2.1e-11 72.8 42 73.8
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 2.8e-11 72.4 43 72.1
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.6e-11 72.0 43 72.1
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 4.7e-11 71.6 43 74.4
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.7e-11 71.6 43 74.4
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 8.1e-11 70.9 46 67.4
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.1e-10 70.5 44 68.2
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 1.1e-10 70.5 45 73.3
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.1e-10 70.5 43 72.1
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 1.4e-10 70.1 44 68.2
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.8e-10 69.7 43 69.8
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.8e-10 69.7 87 71.3
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.1e-10 68.9 43 72.1
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.1e-10 68.9 43 72.1
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.0e-10 68.6 43 72.1
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.0e-10 68.6 43 72.1
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 5.2e-10 68.2 44 65.9
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 5.2e-10 68.2 79 77.2
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 5.2e-10 68.2 43 69.8
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.2e-10 68.2 43 69.8
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 6.8e-10 67.8 46 67.4
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 6.8e-10 67.8 48 60.4
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 8.9e-10 67.4 43 67.4
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 8.9e-10 67.4 43 69.8
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 8.9e-10 67.4 44 63.6
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 8.9e-10 67.4 43 67.4
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 1.5e-09 66.6 47 63.8
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 1.5e-09 66.6 37 75.7
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 2.0e-09 66.2 44 65.9
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.6e-09 65.9 43 69.8
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 4.4e-09 65.1 43 65.1
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 5.8e-09 64.7 40 67.5
Lsat_1_v5_gn_9_41200 Lactuca sativa HOM05D002879 ORTHO05D002930 7.5e-09 64.3 46 60.9
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 9.9e-09 63.9 43 65.1
vmacro01467 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 9.9e-09 63.9 48 60.4
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 9.9e-09 63.9 47 59.6
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.3e-08 63.5 40 72.5
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.7e-08 63.2 40 70.0
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.7e-08 63.2 40 70.0
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 1.7e-08 63.2 42 64.3
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.9e-08 62.4 46 63.0
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.9e-08 62.4 46 63.0
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.9e-08 62.4 46 63.0
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 2.9e-08 62.4 45 64.4
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.9e-08 62.4 43 69.8
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 3.7e-08 62.0 39 66.7
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 6.4e-08 61.2 39 69.2
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 6.4e-08 61.2 44 61.4
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.4e-08 61.2 48 56.2
AUR62014501 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.1e-07 60.5 87 69.0
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-07 60.1 44 65.9
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.4e-07 60.1 48 54.2
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.4e-07 60.1 93 43.0
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.4e-07 60.1 48 58.3
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.9e-07 59.7 43 65.1
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.9e-07 59.7 36 75.0
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.9e-07 59.7 36 75.0
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.9e-07 59.7 44 61.4
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.9e-07 59.7 44 63.6
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.9e-07 59.7 44 63.6
SEGI_17221 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.9e-07 59.7 38 65.8
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.9e-07 59.7 43 62.8
vmacro02689 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.4e-07 59.3 43 65.1
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.4e-07 59.3 48 60.4
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 2.4e-07 59.3 45 64.4
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 3.2e-07 58.9 83 38.6
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 5.4e-07 58.2 45 62.2
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 7.1e-07 57.8 43 62.8
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 7.1e-07 57.8 51 60.8
Zm00001eb091920 Zea mays HOM05D002879 ORTHO05D002930 7.1e-07 57.8 31 80.6
AUR62035549 Chenopodium quinoa HOM05D002879 ORTHO05D002930 9.2e-07 57.4 48 56.2
AUR62038034 Chenopodium quinoa HOM05D002879 ORTHO05D002930 9.2e-07 57.4 48 56.2
AUR62038037 Chenopodium quinoa HOM05D002879 ORTHO05D002930 9.2e-07 57.4 48 56.2
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 9.2e-07 57.4 44 63.6
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 1.2e-06 57.0 43 62.8
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.2e-06 57.0 40 62.5
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 1.6e-06 56.6 35 68.6
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.7e-06 55.8 87 56.3
AUR62026686 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.6e-06 55.1 40 60.0
Oeu046050.1 Olea europaea HOM05D002879 ORTHO05D002930 6.0e-06 54.7 29 82.8
Hund17450 Selenicereus undatus HOM05D056215 ORTHO05D002930 6.0e-06 54.7 82 68.3


User provided reference genes

Program Settings