Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23416 Vaccinium macrocarpon HOM05D006907 ORTHO05D008598 1.3e-82 309.7 155 100.0
vmacro09954 Vaccinium macrocarpon HOM05D006907 ORTHO05D008598 4.6e-72 274.6 142 97.2
Rhsim09G0186200 Rhododendron simsii HOM05D006907 ORTHO05D008598 5.1e-47 191.4 144 75.0
Actinidia07785 Actinidia chinensis HOM05D006907 ORTHO05D008598 3.7e-29 132.1 133 58.6
Solyc03g095760.3 Solanum lycopersicum HOM05D006907 ORTHO05D008598 1.6e-21 106.7 136 50.7
Sopen03g025680 Solanum pennellii HOM05D006907 ORTHO05D008598 7.6e-19 97.8 119 52.1
Actinidia01006 Actinidia chinensis HOM05D006907 ORTHO05D008598 1.9e-17 93.2 65 64.6
Nitab4.5_0005454g0010 Nicotiana tabacum HOM05D006907 ORTHO05D008598 2.1e-16 89.7 143 48.3
CSS0048250 Camellia sinensis var. sinensis HOM05D006907 ORTHO05D008598 6.1e-16 88.2 67 61.2
Peaxi162Scf00073g02343 Petunia axillaris HOM05D006907 ORTHO05D008598 1.3e-15 87.0 128 46.1
Nitab4.5_0000171g0200 Nicotiana tabacum HOM05D006907 ORTHO05D008598 2.3e-15 86.3 129 48.8
MD01G1168900 Malus domestica HOM05D006907 ORTHO05D008598 3.0e-15 85.9 118 47.5
Lsat_1_v5_gn_9_60220 Lactuca sativa HOM05D006907 ORTHO05D008598 5.1e-15 85.1 147 40.8
Cc02_g05260 Coffea canephora HOM05D006907 ORTHO05D008598 6.7e-15 84.7 146 41.1
Nn2g10277 Nelumbo nucifera HOM05D006907 ORTHO05D008598 6.7e-15 84.7 149 44.3
CSS0049786 Camellia sinensis var. sinensis HOM05D006907 ORTHO05D008598 1.1e-14 84.0 75 60.0
Prupe.2G265100 Prunus persica HOM05D006907 ORTHO05D008598 3.3e-14 82.4 121 45.5
MBI15_g39385_MAGBIO Magnolia biondii HOM05D006907 ORTHO05D008598 5.7e-14 81.6 134 41.0
MD07G1234800 Malus domestica HOM05D006907 ORTHO05D008598 5.7e-14 81.6 122 45.9
COL.COLO4_19467 Corchorus olitorius HOM05D006907 ORTHO05D008598 1.3e-13 80.5 89 56.2
CAN.G788.6 Capsicum annuum HOM05D006907 ORTHO05D008598 2.2e-13 79.7 124 48.4
GSVIVG01032660001 Vitis vinifera HOM05D006907 ORTHO05D008598 2.8e-13 79.3 142 42.3
Lj1A968T56 Lonicera japonica HOM05D006907 ORTHO05D008598 3.7e-13 79.0 101 49.5
Duzib128G0149 Durio zibethinus HOM05D006907 ORTHO05D008598 6.3e-13 78.2 118 49.2
Thecc.10G184400 Theobroma cacao HOM05D006907 ORTHO05D008598 1.4e-12 77.0 119 46.2
Cpa.g.sc19.43 Carica papaya HOM05D006907 ORTHO05D008598 1.8e-12 76.6 129 43.4
Atru.chr12.200 Acer truncatum HOM05D006907 ORTHO05D008598 4.1e-12 75.5 112 42.0
Ciclev10031468m.g Citrus clementina HOM05D006907 ORTHO05D008598 5.3e-12 75.1 121 41.3
HanXRQChr09g0252611 Helianthus annuus HOM05D006907 ORTHO05D008598 6.9e-12 74.7 119 44.5
Potri.019G059400 Populus trichocarpa HOM05D006907 ORTHO05D008598 1.2e-11 73.9 124 41.9
Sabra19G0074600 Salix brachista HOM05D006907 ORTHO05D008598 2.0e-11 73.2 127 42.5
FvH4_7g26040 Fragaria vesca HOM05D006907 ORTHO05D008598 3.4e-11 72.4 124 41.9
Aqoxy4G03267 Aquilegia oxysepala HOM05D006907 ORTHO05D008598 4.5e-11 72.0 135 38.5
Gohir.A10G177900 Gossypium hirsutum HOM05D006907 ORTHO05D008598 4.5e-11 72.0 108 48.1
Gohir.D10G184500 Gossypium hirsutum HOM05D006907 ORTHO05D008598 4.5e-11 72.0 120 46.7
Gorai.011G206700 Gossypium raimondii HOM05D006907 ORTHO05D008598 4.5e-11 72.0 120 46.7
Lalb_Chr10g0102821 Lupinus albus HOM05D006907 ORTHO05D008598 5.9e-11 71.6 98 45.9
CANSAT56G4251 Cannabis sativa HOM05D006907 ORTHO05D008598 1.0e-10 70.9 116 38.8
PGR142G0552 Punica granatum HOM05D006907 ORTHO05D008598 1.7e-10 70.1 65 55.4
FAN10G1315 Fragaria x ananassa HOM05D006907 ORTHO05D008598 2.2e-10 69.7 124 41.1
SGA_v2.0_scaffold60G20881 Striga asiatica HOM05D006907 ORTHO05D008598 2.9e-10 69.3 132 41.7
AUR62024944 Chenopodium quinoa HOM05D006907 ORTHO05D008598 6.5e-10 68.2 134 39.6
Eucgr.G03146 Eucalyptus grandis HOM05D006907 ORTHO05D008598 6.5e-10 68.2 69 56.5
TWI09G1357 Tripterygium wilfordii HOM05D006907 ORTHO05D008598 6.5e-10 68.2 121 40.5
Haze_17366 Corylus avellana HOM05D006907 ORTHO05D008598 8.5e-10 67.8 124 39.5
RcHm_v2.0_Chr1g0372451 Rosa chinensis HOM05D006907 ORTHO05D008598 8.5e-10 67.8 125 40.0
ClCG07G005250 Citrullus lanatus HOM05D006907 ORTHO05D008598 1.4e-09 67.0 122 42.6
Migut.F00571 Erythranthe guttata HOM05D006907 ORTHO05D008598 1.4e-09 67.0 104 41.3
FAN03G0212 Fragaria x ananassa HOM05D006907 ORTHO05D008598 1.4e-09 67.0 122 38.5
HanXRQChr15g0493701 Helianthus annuus HOM05D006907 ORTHO05D008598 2.5e-09 66.2 142 39.4
Aa31LG3G1390 Aethionema arabicum HOM05D006907 ORTHO05D008598 5.5e-09 65.1 118 42.4
AL4G38640 Arabidopsis lyrata HOM05D006907 ORTHO05D008598 5.5e-09 65.1 79 44.3
BraA04t18568Z Brassica rapa HOM05D006907 ORTHO05D008598 7.2e-09 64.7 108 42.6
Cfa001200 Carpinus fangiana HOM05D006907 ORTHO05D008598 7.2e-09 64.7 129 39.5
AUR62030595 Chenopodium quinoa HOM05D006907 ORTHO05D008598 7.2e-09 64.7 134 37.3
PSO017G1173 Papaver somniferum HOM05D006907 ORTHO05D008598 7.2e-09 64.7 88 44.3
PSO170G2165 Papaver somniferum HOM05D006907 ORTHO05D008598 7.2e-09 64.7 30 93.3
A04p31130 Brassica napus HOM05D006907 ORTHO05D008598 9.4e-09 64.3 108 41.7
Carub.0004s2305 Capsella rubella HOM05D006907 ORTHO05D008598 9.4e-09 64.3 40 77.5
Sed0002395 Sechium edule HOM05D006907 ORTHO05D008598 9.4e-09 64.3 107 39.3
QL08p065047 Quercus lobata HOM05D006907 ORTHO05D008598 1.2e-08 63.9 137 37.2
VMungo0647G0955 Vigna mungo HOM05D006907 ORTHO05D008598 1.2e-08 63.9 119 41.2
Ca_05520_v3 Cicer arietinum L. HOM05D006907 ORTHO05D008598 1.6e-08 63.5 134 38.8
ECA232G1360 Erigeron canadensis HOM05D006907 ORTHO05D008598 1.6e-08 63.5 116 43.1
Thhalv10016615m.g Eutrema salsugineum HOM05D006907 ORTHO05D008598 1.6e-08 63.5 75 52.0
THA.LOC104803214 Tarenaya hassleriana HOM05D006907 ORTHO05D008598 1.6e-08 63.5 127 40.2
TAR369G1120 Trochodendron aralioides HOM05D006907 ORTHO05D008598 1.6e-08 63.5 31 87.1
MELO3C034382.2 Cucumis melo HOM05D006907 ORTHO05D008598 2.1e-08 63.2 105 42.9
CsaV3_5G011090 Cucumis sativus L. HOM05D006907 ORTHO05D008598 2.1e-08 63.2 65 52.3
Phvul.008G186100 Phaseolus vulgaris HOM05D006907 ORTHO05D008598 2.1e-08 63.2 85 49.4
BolC4t28352H Brassica oleracea HOM05D006907 ORTHO05D008598 2.7e-08 62.8 108 41.7
arahy.Tifrunner.gnm1.ann1.NJ2MZ3 Arachis hypogaea HOM05D006907 ORTHO05D008598 3.6e-08 62.4 127 39.4
CDE04G0642 Ceratophyllum demersum HOM05D006907 ORTHO05D008598 3.6e-08 62.4 39 71.8
Medtr5g067730 Medicago truncatula HOM05D006907 ORTHO05D008598 3.6e-08 62.4 93 46.2
AT2G40760 Arabidopsis thaliana HOM05D006907 ORTHO05D008598 4.6e-08 62.0 79 45.6
CARHR135850 Cardamine hirsuta HOM05D006907 ORTHO05D008598 4.6e-08 62.0 116 37.9
Psat2g062800 Pisum sativum HOM05D006907 ORTHO05D008598 4.6e-08 62.0 136 39.0
Sp4g23070 Schrenkiella parvula HOM05D006907 ORTHO05D008598 4.6e-08 62.0 116 39.7
Sc10g0003040 Simmondsia chinensis HOM05D006907 ORTHO05D008598 4.6e-08 62.0 61 54.1
ATR1127G060 Amborella trichopoda HOM05D006907 ORTHO05D008598 6.1e-08 61.6 36 75.0
DCAR_005878 Daucus carota HOM05D006907 ORTHO05D008598 6.1e-08 61.6 76 44.7
LjContig00408g0020575 Lotus japonicus HOM05D006907 ORTHO05D008598 6.1e-08 61.6 121 43.0
Ah.11g042410 Amaranthus hybridus HOM05D006907 ORTHO05D008598 7.9e-08 61.2 143 39.2
C04p68530 Brassica napus HOM05D006907 ORTHO05D008598 7.9e-08 61.2 123 41.5
SEGI_00934 Sequoiadendron giganteum HOM05D006907 ORTHO05D008598 1.4e-07 60.5 41 68.3
Duzib114G0530 Durio zibethinus HOM05D006907 ORTHO05D008598 1.8e-07 60.1 132 38.6
Hund13440 Selenicereus undatus HOM05D006907 ORTHO05D008598 1.8e-07 60.1 145 35.2
BcaB01g03517 Brassica carinata HOM05D006907 ORTHO05D008598 3.0e-07 59.3 40 70.0
Os05g0323100 Oryza sativa ssp. japonica HOM05D006907 ORTHO05D008598 3.0e-07 59.3 44 59.1
Manes.07G142300 Manihot esculenta HOM05D006907 ORTHO05D008598 5.1e-07 58.5 125 41.6
HPP92_006691 Vanilla planifolia HOM05D006907 ORTHO05D008598 1.1e-06 57.4 41 58.5
TPR.G33940 Trifolium pratense HOM05D006907 ORTHO05D008598 2.0e-06 56.6 78 46.2
Glyma.02G218900 Glycine max HOM05D006907 ORTHO05D008598 2.5e-06 56.2 85 43.5
arahy.Tifrunner.gnm1.ann1.ZF4YMU Arachis hypogaea HOM05D006907 ORTHO05D008598 7.4e-06 54.7 128 36.7


User provided reference genes

Program Settings