Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23372 Vaccinium macrocarpon HOM05D015182 ORTHO05D010968 4.2e-220 767.7 381 100.0
vmacro07191 Vaccinium macrocarpon HOM05D015182 ORTHO05D010968 3.9e-218 761.1 380 99.5
vmacro10773 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 9.0e-154 547.4 482 64.3
vmacro21216 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 4.0e-93 345.9 485 48.5
vmacro16092 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 5.2e-53 212.6 307 39.4
Rhsim08G0127600 Rhododendron simsii HOM05D009613 ORTHO05D012253 5.6e-39 166.0 250 39.6
Rhsim07G0153600 Rhododendron simsii HOM05D015182 ORTHO05D010968 1.0e-32 145.2 335 35.5
vmacro14269 Vaccinium macrocarpon HOM05D001028 ORTHO05D010968 1.5e-31 141.4 219 37.4
Rhsim08G0143400 Rhododendron simsii HOM05D002230 ORTHO05D010968 9.6e-31 138.7 110 58.2
QL09p053831 Quercus lobata HOM05D010068 ORTHO05D010968 9.6e-23 112.1 318 29.6
CSS0049128 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 2.9e-19 100.5 165 38.8
CSS0032941 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 3.8e-19 100.1 161 36.0
CSS0038202 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 3.8e-19 100.1 167 36.5
CSS0046904 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 8.4e-19 99.0 226 31.9
CSS0016209 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 1.9e-18 97.8 226 30.5
CSS0003496 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 3.2e-18 97.1 225 31.1
Rhsim03G0182200 Rhododendron simsii HOM05D015182 ORTHO05D010968 4.2e-18 96.7 113 44.2
CSS0021942 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 7.9e-17 92.4 161 36.0
CSS0037510 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 2.3e-16 90.9 222 31.1
CSS0037570 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 7.4e-15 85.9 226 28.8
CSS0049203 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 6.2e-14 82.8 173 34.1
Rhsim05G0131100 Rhododendron simsii HOM05D008917 ORTHO05D010968 1.2e-12 78.6 68 58.8
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 2.0e-12 77.8 298 25.8
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 3.4e-12 77.0 298 25.8
CSS0039917 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 5.8e-12 76.3 160 33.8
CSS0027407 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 7.6e-12 75.9 148 35.8
RhsimUnG0002500 Rhododendron simsii HOM05D015182 ORTHO05D010968 1.7e-11 74.7 78 47.4
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.7e-11 74.7 298 25.8
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 3.8e-11 73.6 298 25.5
TAR275G0001 Trochodendron aralioides HOM05D032489 ORTHO05D001786 6.5e-11 72.8 265 24.5
PGR044G2228 Punica granatum HOM05D013472 ORTHO05D015108 8.4e-11 72.4 298 25.2
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 8.4e-11 72.4 296 25.3
EL10Ac9g22434 Beta vulgaris HOM05D056876 ORTHO05D010968 9.3e-10 68.9 255 22.0
vmacro12501 Vaccinium macrocarpon HOM05D001824 ORTHO05D010055 6.1e-09 66.2 179 26.3
PGR119G2091 Punica granatum HOM05D013472 ORTHO05D015108 7.9e-09 65.9 298 25.5
PGR142G2288 Punica granatum HOM05D013472 ORTHO05D015108 1.0e-08 65.5 297 24.9
Nitab4.5_0001116g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.8e-08 64.7 284 24.6
PGR142G1294 Punica granatum HOM05D013472 ORTHO05D015108 2.3e-08 64.3 299 25.4
Sopen01g017450 Solanum pennellii HOM05D002047 ORTHO05D001422 3.0e-08 63.9 234 24.4
Dinv11092 Davidia involucrata HOM05D012821 ORTHO05D001422 1.1e-07 62.0 184 27.2
MBI12_g00600_MAGBIO Magnolia biondii HOM05D003711 ORTHO05D001786 3.3e-07 60.5 148 29.7
Lj5A377T16 Lonicera japonica HOM05D015182 ORTHO05D010968 4.3e-07 60.1 241 25.3
PGR083G1646 Punica granatum HOM05D013472 ORTHO05D015108 4.3e-07 60.1 297 23.2
Nitab4.5_0003592g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.7e-07 59.7 121 33.1
Rhsim05G0118800 Rhododendron simsii HOM05D009613 ORTHO05D012253 1.3e-06 58.5 42 57.1
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-06 58.5 180 26.7
PGSC0003DMG400016492 Solanum tuberosum HOM05D002047 ORTHO05D001422 1.6e-06 58.2 227 24.7
Sopen09g022070 Solanum pennellii HOM05D000047 ORTHO05D001422 2.2e-06 57.8 183 26.8
Actinidia17705 Actinidia chinensis HOM05D044942 ORTHO05D010968 2.8e-06 57.4 76 39.5
PGR142G0060 Punica granatum HOM05D013472 ORTHO05D015108 2.8e-06 57.4 315 23.5
Nitab4.5_0005039g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.7e-06 57.0 260 25.0
Nitab4.5_0010485g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.2e-06 55.8 275 25.5
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 8.2e-06 55.8 180 26.7


User provided reference genes

Program Settings