Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.6e-114 416.0 196 100.0
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.3e-67 257.7 181 68.0
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.6e-24 116.3 164 41.5
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.5e-22 108.6 136 48.5
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.5e-22 108.6 136 48.5
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 7.1e-22 108.2 134 46.3
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.5e-21 105.9 135 45.9
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.3e-20 103.2 135 45.2
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 3.0e-20 102.8 136 47.1
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 8.7e-20 101.3 133 43.6
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.6e-18 97.1 135 43.7
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.8e-18 96.3 136 44.1
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 6.3e-18 95.1 135 44.4
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 1.1e-17 94.4 138 42.8
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.4e-17 94.0 128 43.0
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 1.8e-17 93.6 141 41.8
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 2.4e-17 93.2 135 43.0
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.1e-17 92.8 135 40.7
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 5.3e-17 92.0 135 45.2
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 5.3e-17 92.0 144 41.0
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.9e-17 91.7 135 38.5
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-16 90.9 136 42.6
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 1.5e-16 90.5 126 42.9
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 1.5e-16 90.5 126 42.9
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 1.5e-16 90.5 126 42.9
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.5e-16 90.5 128 46.9
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 1.5e-16 90.5 134 38.8
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.0e-16 90.1 128 40.6
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-16 90.1 139 38.8
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 3.4e-16 89.4 136 42.6
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.5e-16 89.0 126 45.2
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.5e-16 89.0 126 45.2
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.9e-16 88.6 128 45.3
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.3e-15 87.4 128 44.5
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.3e-15 87.4 128 43.8
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.9e-15 86.3 132 38.6
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.8e-15 85.9 100 50.0
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 5.0e-15 85.5 126 44.4
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.5e-15 85.1 128 43.0
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.5e-15 85.1 128 43.0
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-14 84.0 136 40.4
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-14 84.0 98 45.9
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-14 84.0 98 45.9
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 1.9e-14 83.6 98 50.0
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.9e-14 83.6 125 41.6
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 2.5e-14 83.2 100 47.0
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 3.2e-14 82.8 128 42.2
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 3.2e-14 82.8 128 42.2
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-14 82.8 126 39.7
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.2e-14 82.4 129 36.4
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.5e-14 82.0 98 49.0
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.5e-14 82.0 100 45.0
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.2e-14 81.6 98 44.9
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 9.4e-14 81.3 129 42.6
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.4e-14 81.3 125 40.8
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 1.2e-13 80.9 98 42.9
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-13 80.5 98 42.9
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 2.7e-13 79.7 128 38.3
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 3.6e-13 79.3 125 40.8
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.6e-13 79.0 111 37.8
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 4.6e-13 79.0 128 38.3
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 6.1e-13 78.6 128 42.2
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.3e-12 76.6 97 42.3
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 3.9e-12 75.9 127 37.8
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 3.9e-12 75.9 98 42.9
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 5.1e-12 75.5 98 44.9
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 5.1e-12 75.5 98 44.9
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.1e-12 75.5 98 38.8
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 6.7e-12 75.1 186 29.6
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 6.7e-12 75.1 98 40.8
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 6.7e-12 75.1 98 40.8
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 8.8e-12 74.7 125 41.6
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.3e-11 72.8 96 41.7
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 3.3e-11 72.8 98 39.8
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.7e-11 71.2 98 38.8
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-10 70.9 99 44.4
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-10 70.9 99 44.4
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.3e-10 70.9 125 34.4
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-10 70.5 124 37.1
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 2.2e-10 70.1 128 34.4
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 3.7e-10 69.3 137 35.0
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 3.7e-10 69.3 128 38.3
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 4.8e-10 68.9 99 38.4
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-09 67.4 136 33.8
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-09 67.4 99 41.4
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-09 67.4 94 40.4
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-09 66.6 137 32.8
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 4.1e-09 65.9 122 35.2
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 9.1e-09 64.7 86 41.9
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.2e-08 64.3 125 34.4
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-08 63.5 124 32.3
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 7.7e-08 61.6 135 33.3
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.3e-07 60.8 101 36.6
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.3e-07 60.8 95 36.8
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.2e-07 60.1 104 36.5
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 2.9e-07 59.7 95 34.7
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 2.9e-07 59.7 89 37.1
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 5.0e-07 58.9 89 39.3
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-06 57.4 128 36.7
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.5e-06 56.6 128 38.3
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-06 56.2 126 31.7
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 4.2e-06 55.8 113 35.4
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 4.2e-06 55.8 90 43.3
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 9.4e-06 54.7 82 39.0
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 9.4e-06 54.7 87 40.2


User provided reference genes

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