Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23281 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 3.5e-52 208.0 103 100.0
vmacro05011 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 1.5e-50 202.6 99 100.0
RhsimUnG0226900 Rhododendron simsii HOM05D006420 ORTHO05D008009 1.7e-43 179.1 99 86.9
Actinidia05697 Actinidia chinensis HOM05D006420 ORTHO05D008009 1.6e-41 172.6 99 81.8
Hma1.2p1_0928F.1_g237740 Hydrangea macrophylla HOM05D006420 ORTHO05D008009 1.2e-39 166.4 99 79.8
TAR365G0270 Trochodendron aralioides HOM05D006420 ORTHO05D008009 2.0e-39 165.6 99 80.8
MSTRG.5100 Avicennia marina HOM05D006420 ORTHO05D008009 3.4e-39 164.9 99 78.8
TAR636G1821 Trochodendron aralioides HOM05D006420 ORTHO05D008009 7.5e-39 163.7 99 78.8
Lj9A85G78 Lonicera japonica HOM05D006420 ORTHO05D008009 3.7e-38 161.4 99 76.8
Lj9A86G16 Lonicera japonica HOM05D006420 ORTHO05D008009 3.7e-38 161.4 99 76.8
Oeu010909.1 Olea europaea HOM05D006420 ORTHO05D008009 3.7e-38 161.4 99 74.7
Lsat_1_v5_gn_9_123421 Lactuca sativa HOM05D006420 ORTHO05D008009 4.9e-38 161.0 99 76.8
Dinv23938 Davidia involucrata HOM05D006420 ORTHO05D008009 6.4e-38 160.6 99 76.8
CSS0034260 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 8.3e-38 160.2 99 75.8
CSS0037657 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 5.4e-37 157.5 99 74.7
Hund21694 Selenicereus undatus HOM05D006420 ORTHO05D008009 5.4e-37 157.5 99 72.7
SGA_v2.0_scaffold81G26063 Striga asiatica HOM05D006420 ORTHO05D000105 9.2e-37 156.8 99 73.7
Nn4g26277 Nelumbo nucifera HOM05D006420 ORTHO05D008009 2.1e-36 155.6 99 73.7
Nn1g02269 Nelumbo nucifera HOM05D006420 ORTHO05D008009 3.5e-36 154.8 99 74.7
EL10Ac4g09358 Beta vulgaris HOM05D006420 ORTHO05D008009 1.0e-35 153.3 99 70.7
Aqoxy5G00493 Aquilegia oxysepala HOM05D006420 ORTHO05D008009 1.3e-35 152.9 99 71.7
GSVIVG01000081001 Vitis vinifera HOM05D006420 ORTHO05D008009 2.3e-35 152.1 99 72.7
Eucgr.B01859 Eucalyptus grandis HOM05D006420 ORTHO05D008009 5.1e-35 151.0 99 70.7
Eucgr.B01946 Eucalyptus grandis HOM05D006420 ORTHO05D008009 1.5e-34 149.4 99 69.7
RcHm_v2.0_Chr3g0454981 Rosa chinensis HOM05D006420 ORTHO05D008009 1.5e-34 149.4 99 69.7
Eucgr.B01949 Eucalyptus grandis HOM05D006420 ORTHO05D008009 1.9e-34 149.1 99 69.7
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 3.3e-34 148.3 99 68.7
FvH4_6g06020 Fragaria vesca HOM05D006420 ORTHO05D008009 5.6e-34 147.5 99 67.7
FAN14G2531 Fragaria x ananassa HOM05D006420 ORTHO05D008009 5.6e-34 147.5 99 67.7
FAN05G1000 Fragaria x ananassa HOM05D006420 ORTHO05D008009 7.3e-34 147.1 102 66.7
FAN05G3282 Fragaria x ananassa HOM05D006420 ORTHO05D008009 7.3e-34 147.1 99 67.7
MD12G1218500 Malus domestica HOM05D006420 ORTHO05D008009 7.3e-34 147.1 99 66.7
PSO210G7816 Papaver somniferum HOM05D006420 ORTHO05D008009 7.3e-34 147.1 99 68.7
Cc02_g33350 Coffea canephora HOM05D006420 ORTHO05D008009 9.5e-34 146.7 99 69.7
ClCG02G015760 Citrullus lanatus HOM05D006420 ORTHO05D008009 1.2e-33 146.4 99 67.7
COL.COLO4_13456 Corchorus olitorius HOM05D006420 ORTHO05D008009 1.2e-33 146.4 99 66.7
DCAR_029409 Daucus carota HOM05D006420 ORTHO05D008009 1.2e-33 146.4 99 70.7
Thecc.05G302400 Theobroma cacao HOM05D006420 ORTHO05D008009 1.2e-33 146.4 99 66.7
CAN.G1034.41 Capsicum annuum HOM05D006420 ORTHO05D008009 1.6e-33 146.0 98 68.4
CsaV3_2G005340 Cucumis sativus L. HOM05D006420 ORTHO05D008009 1.6e-33 146.0 99 67.7
Migut.N01987 Erythranthe guttata HOM05D006420 ORTHO05D008009 1.6e-33 146.0 99 71.7
Migut.N02012 Erythranthe guttata HOM05D006420 ORTHO05D008009 1.6e-33 146.0 99 71.7
MD04G1204800 Malus domestica HOM05D006420 ORTHO05D008009 1.6e-33 146.0 99 67.7
Prupe.6G324800 Prunus persica HOM05D006420 ORTHO05D008009 2.1e-33 145.6 99 65.7
Duzib177G0348 Durio zibethinus HOM05D006420 ORTHO05D008009 2.8e-33 145.2 99 67.7
Nitab4.5_0000137g0140 Nicotiana tabacum HOM05D006420 ORTHO05D008009 2.8e-33 145.2 98 69.4
THA.LOC104820863 Tarenaya hassleriana HOM05D006420 ORTHO05D008009 2.8e-33 145.2 99 64.6
PGR083G0891 Punica granatum HOM05D006420 ORTHO05D008009 3.6e-33 144.8 99 66.7
Ah.04g160290 Amaranthus hybridus HOM05D006420 ORTHO05D008009 4.7e-33 144.4 99 63.6
AUR62005152 Chenopodium quinoa HOM05D006420 ORTHO05D008009 4.7e-33 144.4 99 64.6
MELO3C004253.2 Cucumis melo HOM05D000208 ORTHO05D000130 4.7e-33 144.4 99 66.7
FAN02G2504 Fragaria x ananassa HOM05D006420 ORTHO05D008009 4.7e-33 144.4 99 65.7
FAN09G3808 Fragaria x ananassa HOM05D006420 ORTHO05D008009 8.1e-33 143.7 99 64.6
Peaxi162Scf00037g00513 Petunia axillaris HOM05D006420 ORTHO05D008009 1.1e-32 143.3 98 68.4
Glyma.20G234300 Glycine max HOM05D006420 ORTHO05D008009 1.4e-32 142.9 99 67.7
Sed0005627 Sechium edule HOM05D006420 ORTHO05D008009 1.4e-32 142.9 99 67.7
AUR62000819 Chenopodium quinoa HOM05D006420 ORTHO05D008009 2.3e-32 142.1 99 63.6
Ciclev10002177m.g Citrus clementina HOM05D006420 ORTHO05D008009 2.3e-32 142.1 99 66.7
CiPaw.07G020700 Carya illinoinensis HOM05D006420 ORTHO05D008009 4.0e-32 141.4 99 63.6
PGSC0003DMG400024687 Solanum tuberosum HOM05D006420 ORTHO05D008009 4.0e-32 141.4 98 68.4
Gohir.D08G227700 Gossypium hirsutum HOM05D006420 ORTHO05D008009 5.2e-32 141.0 99 64.6
Gorai.004G241900 Gossypium raimondii HOM05D006420 ORTHO05D008009 5.2e-32 141.0 99 64.6
Solyc01g099130.3 Solanum lycopersicum HOM05D006420 ORTHO05D008009 6.8e-32 140.6 98 68.4
Sopen01g042690 Solanum pennellii HOM05D006420 ORTHO05D008009 6.8e-32 140.6 98 68.4
Manes.08G120400 Manihot esculenta HOM05D006420 ORTHO05D008009 8.9e-32 140.2 99 64.6
Nitab4.5_0005541g0070 Nicotiana tabacum HOM05D006420 ORTHO05D008009 8.9e-32 140.2 95 68.4
Sc06g0003280 Simmondsia chinensis HOM05D006420 ORTHO05D008009 1.2e-31 139.8 99 62.6
Duzib106G1877 Durio zibethinus HOM05D006420 ORTHO05D008009 1.5e-31 139.4 99 63.6
Medtr1g082950 Medicago truncatula HOM05D006420 ORTHO05D008009 1.5e-31 139.4 99 65.7
Glyma.10G154000 Glycine max HOM05D006420 ORTHO05D008009 2.0e-31 139.0 99 64.6
Phvul.007G179700 Phaseolus vulgaris HOM05D006420 ORTHO05D008009 2.0e-31 139.0 99 65.7
Ca_10114_v3 Cicer arietinum L. HOM05D006420 ORTHO05D008009 2.6e-31 138.7 99 66.7
Gohir.A08G210900 Gossypium hirsutum HOM05D006420 ORTHO05D008009 2.6e-31 138.7 99 63.6
arahy.Tifrunner.gnm1.ann1.7ESY4D Arachis hypogaea HOM05D006420 ORTHO05D008009 5.8e-31 137.5 99 66.7
arahy.Tifrunner.gnm1.ann1.GHU2GX Arachis hypogaea HOM05D006420 ORTHO05D008009 5.8e-31 137.5 99 66.7
MD10G1167700 Malus domestica HOM05D006420 ORTHO05D008009 5.8e-31 137.5 99 62.6
CANSAT54G1557 Cannabis sativa HOM05D006420 ORTHO05D008009 7.5e-31 137.1 99 65.7
A03p68650 Brassica napus HOM05D006420 ORTHO05D008009 9.9e-31 136.7 99 59.6
BraSC39t46193Z Brassica rapa HOM05D006420 ORTHO05D008009 9.9e-31 136.7 99 59.6
HPP92_020377 Vanilla planifolia HOM05D006420 ORTHO05D008009 9.9e-31 136.7 98 67.3
VMungo0720G1765 Vigna mungo HOM05D006420 ORTHO05D008009 9.9e-31 136.7 99 65.7
BcaC06g31763 Brassica carinata HOM05D006420 ORTHO05D008009 1.3e-30 136.3 99 59.6
Cpa.g.sc48.61 Carica papaya HOM05D006420 ORTHO05D008009 1.3e-30 136.3 99 62.6
Lalb_Chr21g0310681 Lupinus albus HOM05D006420 ORTHO05D008009 1.3e-30 136.3 99 62.6
Psat6g150480 Pisum sativum HOM05D006420 ORTHO05D008009 1.3e-30 136.3 99 64.6
TPR.G6113 Trifolium pratense HOM05D006420 ORTHO05D008009 1.7e-30 136.0 99 65.7
Cfa006594 Carpinus fangiana HOM05D006420 ORTHO05D008009 3.7e-30 134.8 99 62.6
Thhalv10023646m.g Eutrema salsugineum HOM05D006420 ORTHO05D008009 3.7e-30 134.8 99 57.6
HanXRQChr16g0524621 Helianthus annuus HOM05D006420 ORTHO05D008009 1.1e-29 133.3 93 68.8
Haze_04190 Corylus avellana HOM05D006420 ORTHO05D008009 1.4e-29 132.9 99 61.6
Lj5g0015213 Lotus japonicus HOM05D006420 ORTHO05D008009 5.4e-29 131.0 99 63.6
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 9.2e-29 130.2 99 55.6
BcaC02g10755 Brassica carinata HOM05D006420 ORTHO05D008009 9.2e-29 130.2 99 57.6
C04p25420 Brassica napus HOM05D006420 ORTHO05D008009 9.2e-29 130.2 99 57.6
BolC4t24060H Brassica oleracea HOM05D006420 ORTHO05D008009 9.2e-29 130.2 99 57.6
CARHR287540 Cardamine hirsuta HOM05D006420 ORTHO05D008009 2.7e-28 128.6 93 59.1
Cfa006595 Carpinus fangiana HOM05D006420 ORTHO05D008009 6.0e-28 127.5 99 59.6
AL1G65580 Arabidopsis lyrata HOM05D006420 ORTHO05D008009 7.8e-28 127.1 93 58.1
ATR0332G062 Amborella trichopoda HOM05D006420 ORTHO05D008009 1.0e-27 126.7 99 57.6
Carub.0002s0818 Capsella rubella HOM05D006420 ORTHO05D008009 1.7e-27 125.9 93 58.1
SpUn0004_0090 Schrenkiella parvula HOM05D006420 ORTHO05D008009 2.3e-27 125.6 93 59.1
Atru.chr2.393 Acer truncatum HOM05D006420 ORTHO05D008009 3.0e-27 125.2 98 57.1
TWI56G0424 Tripterygium wilfordii HOM05D006420 ORTHO05D008009 3.0e-27 125.2 99 58.6
AT1G55000 Arabidopsis thaliana HOM05D006420 ORTHO05D008009 6.6e-27 124.0 93 57.0
ECA232G4325 Erigeron canadensis HOM05D006420 ORTHO05D008009 9.5e-26 120.2 97 60.8
Sabra13G0024000 Salix brachista HOM05D006420 ORTHO05D008009 4.7e-25 117.9 95 55.8
Potri.013G021600 Populus trichocarpa HOM05D006420 ORTHO05D008009 1.4e-24 116.3 95 55.8
MBI04_g29616_MAGBIO Magnolia biondii HOM05D006420 ORTHO05D008009 4.0e-24 114.8 65 80.0
Potri.005G032100 Populus trichocarpa HOM05D006420 ORTHO05D008009 4.4e-23 111.3 96 52.1
QL03p007116 Quercus lobata HOM05D006420 ORTHO05D008009 1.4e-21 106.3 108 52.8
Os03g0699600 Oryza sativa ssp. japonica HOM05D006420 ORTHO05D008009 9.2e-21 103.6 88 52.3
Zm00001eb054020 Zea mays HOM05D006420 ORTHO05D008009 2.1e-20 102.4 88 51.1
AagrBONN_evm.TU.Sc2ySwM_368.542 Anthoceros agrestis HOM05D006420 ORTHO05D008009 1.9e-18 95.9 88 51.1
SMO356G0643 Selaginella moellendorffii HOM05D006420 ORTHO05D008009 5.6e-18 94.4 88 50.0
Pp3c16_5370 Physcomitrium patens HOM05D006420 ORTHO05D008009 4.8e-17 91.3 88 51.1
Sabra05G0034600 Salix brachista HOM05D006420 ORTHO05D008009 1.2e-12 76.6 47 68.1
QL03p007137 Quercus lobata HOM05D006420 ORTHO05D008009 2.7e-12 75.5 67 55.2
QL03p007977 Quercus lobata HOM05D006420 ORTHO05D008009 2.7e-12 75.5 67 55.2
Thhalv10024156m.g Eutrema salsugineum HOM05D006420 ORTHO05D008009 1.4e-08 63.2 80 40.0
Cre16.g667100 Chlamydomonas reinhardtii HOM05D006420 ORTHO05D008009 1.2e-07 60.1 89 34.8


User provided reference genes

Program Settings