Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23280 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 2.4e-42 175.3 100 100.0
vmacro05012 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 5.4e-42 174.1 100 99.0
RhsimUnG0226800 Rhododendron simsii HOM05D006774 ORTHO05D008411 6.0e-17 90.9 89 73.0
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 1.8e-16 89.4 94 53.2
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 5.1e-16 87.8 88 63.6
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 1.1e-15 86.7 88 71.6
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 2.5e-15 85.5 96 50.0
CSS0005750 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 3.3e-15 85.1 86 72.1
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 2.8e-14 82.0 86 62.8
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 3.7e-14 81.6 89 56.2
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 1.1e-13 80.1 89 61.8
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 6.9e-13 77.4 84 59.5
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 6.9e-13 77.4 85 64.7
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 1.5e-12 76.3 89 61.8
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 2.6e-12 75.5 89 59.6
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 5.8e-12 74.3 86 60.5
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 1.3e-11 73.2 90 56.7
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 1.7e-11 72.8 88 60.2
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 2.9e-11 72.0 84 54.8
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 2.9e-11 72.0 88 58.0
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 4.9e-11 71.2 86 52.3
CiPaw.10G139100 Carya illinoinensis HOM05D006774 ORTHO05D008411 4.9e-11 71.2 89 46.1
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 4.9e-11 71.2 85 61.2
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 6.5e-11 70.9 84 54.8
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 6.5e-11 70.9 81 65.4
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 8.4e-11 70.5 86 62.8
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 8.4e-11 70.5 86 60.5
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 1.1e-10 70.1 88 58.0
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 1.9e-10 69.3 91 53.8
Oeu051834.1 Olea europaea HOM05D006774 ORTHO05D008411 2.5e-10 68.9 84 60.7
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 4.2e-10 68.2 86 57.0
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 7.1e-10 67.4 90 45.6
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 1.6e-09 66.2 86 55.8
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 2.1e-09 65.9 85 60.0
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 2.7e-09 65.5 85 42.4
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 2.7e-09 65.5 85 50.6
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 2.7e-09 65.5 89 49.4
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 6.0e-09 64.3 89 52.8
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 7.9e-09 63.9 84 40.5
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 1.3e-08 63.2 92 47.8
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 1.3e-08 63.2 86 53.5
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 1.3e-08 63.2 89 51.7
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 1.8e-08 62.8 87 58.6
Migut.N02011 Erythranthe guttata HOM05D006774 ORTHO05D008411 2.3e-08 62.4 88 51.1
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 3.0e-08 62.0 85 49.4
MSTRG.20428 Avicennia marina HOM05D006774 ORTHO05D008411 3.0e-08 62.0 85 40.0
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 3.9e-08 61.6 85 42.4
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 5.1e-08 61.2 86 50.0
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 5.1e-08 61.2 85 57.6
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 5.1e-08 61.2 85 57.6
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 8.7e-08 60.5 85 48.2
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 8.7e-08 60.5 87 52.9
Phvul.006G091800 Phaseolus vulgaris HOM05D006774 ORTHO05D008411 1.9e-07 59.3 54 53.7
ECA236G1211 Erigeron canadensis HOM05D000208 ORTHO05D000130 3.3e-07 58.5 85 49.4
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 3.3e-07 58.5 85 45.9
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 3.3e-07 58.5 87 54.0
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 4.3e-07 58.2 85 38.8
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 4.3e-07 58.2 85 40.0
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 4.3e-07 58.2 85 40.0
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 5.7e-07 57.8 88 50.0
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 7.4e-07 57.4 87 50.6
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 7.4e-07 57.4 91 41.8
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 7.4e-07 57.4 46 58.7
Carub.0002s0819 Capsella rubella HOM05D006774 ORTHO05D008411 1.6e-06 56.2 84 39.3
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 1.6e-06 56.2 83 55.4
Lalb_Chr18g0045661 Lupinus albus HOM05D006774 ORTHO05D008411 2.8e-06 55.5 90 42.2
FAN05G0244 Fragaria x ananassa HOM05D006774 ORTHO05D008411 3.7e-06 55.1 47 48.9
FAN05G2700 Fragaria x ananassa HOM05D006774 ORTHO05D008411 3.7e-06 55.1 47 48.9
Thhalv10023440m.g Eutrema salsugineum HOM05D006774 ORTHO05D008411 4.8e-06 54.7 84 38.1
TAR362G0529 Trochodendron aralioides HOM05D006774 ORTHO05D008411 4.8e-06 54.7 55 50.9
FAN09G1854 Fragaria x ananassa HOM05D006774 ORTHO05D008411 6.2e-06 54.3 47 48.9
FvH4_6g06010 Fragaria vesca HOM05D006774 ORTHO05D008411 8.2e-06 53.9 47 46.8


User provided reference genes

Program Settings