Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05013 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 4.4e-218 761.1 421 100.0
vmacro23279 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 4.4e-218 761.1 421 100.0
RhsimUnG0226700 Rhododendron simsii HOM05D006774 ORTHO05D008411 4.4e-170 601.7 358 83.0
CSS0040526 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 7.5e-170 600.9 377 80.1
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 1.6e-164 583.2 355 82.0
Lj9C83T13 Lonicera japonica HOM05D006774 ORTHO05D008411 7.1e-136 488.0 357 70.9
Lj9C82T10 Lonicera japonica HOM05D006774 ORTHO05D008411 6.0e-135 485.0 350 71.4
MSTRG.20428 Avicennia marina HOM05D006774 ORTHO05D008411 9.0e-131 471.1 356 66.6
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 1.5e-130 470.3 356 65.4
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 3.4e-130 469.2 356 65.2
Lj9C84T1 Lonicera japonica HOM05D006774 ORTHO05D008411 4.5e-130 468.8 337 70.9
Haze_04191 Corylus avellana HOM05D006774 ORTHO05D008411 4.2e-128 462.2 354 62.7
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 2.5e-125 453.0 356 63.2
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 3.3e-125 452.6 354 62.7
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 9.7e-125 451.1 343 63.0
Lsat_1_v5_gn_9_86761 Lactuca sativa HOM05D006774 ORTHO05D008411 9.7e-125 451.1 353 63.7
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 1.1e-123 447.6 355 65.6
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 1.8e-123 446.8 356 61.5
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 2.4e-123 446.4 375 59.5
CiPaw.10G139100 Carya illinoinensis HOM05D006774 ORTHO05D008411 7.6e-122 441.4 353 60.6
HanXRQChr11g0338551 Helianthus annuus HOM05D006774 ORTHO05D008411 1.3e-121 440.7 350 63.7
Nn1g02268 Nelumbo nucifera HOM05D006774 ORTHO05D008411 2.2e-121 439.9 357 60.5
Migut.N02011 Erythranthe guttata HOM05D006774 ORTHO05D008411 9.3e-120 434.5 358 63.4
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 6.1e-119 431.8 354 60.2
FvH4_6g06010 Fragaria vesca HOM05D006774 ORTHO05D008411 1.9e-117 426.8 349 59.0
FAN09G1854 Fragaria x ananassa HOM05D006774 ORTHO05D008411 4.3e-117 425.6 354 58.8
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 7.4e-117 424.9 354 57.9
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 1.7e-116 423.7 355 57.7
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 4.8e-116 422.2 350 58.3
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 1.1e-115 421.0 350 58.6
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 1.8e-115 420.2 354 56.8
Sed0009699 Sechium edule HOM05D006774 ORTHO05D008411 1.8e-115 420.2 359 57.1
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 2.4e-115 419.9 355 58.9
CsaV3_1G038960 Cucumis sativus L. HOM05D006774 ORTHO05D008411 4.1e-115 419.1 354 57.9
FAN05G0244 Fragaria x ananassa HOM05D006774 ORTHO05D008411 6.9e-115 418.3 348 59.2
FAN05G2700 Fragaria x ananassa HOM05D006774 ORTHO05D008411 9.1e-115 417.9 347 58.2
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 1.2e-114 417.5 352 60.8
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 2.0e-114 416.8 354 59.0
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 2.6e-114 416.4 350 58.9
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 3.4e-114 416.0 378 54.2
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 5.9e-114 415.2 357 57.4
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 1.3e-113 414.1 348 58.3
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 8.5e-113 411.4 348 58.0
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 1.1e-112 411.0 357 57.4
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 1.9e-112 410.2 348 57.8
COL.COLO4_13460 Corchorus olitorius HOM05D006774 ORTHO05D008411 2.1e-111 406.8 353 56.9
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 2.7e-111 406.4 352 56.8
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 4.7e-111 405.6 356 56.2
AL1G65540 Arabidopsis lyrata HOM05D006774 ORTHO05D008411 6.1e-111 405.2 356 57.9
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 6.1e-111 405.2 355 56.9
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 1.0e-110 404.4 357 58.0
RcHm_v2.0_Chr3g0454971 Rosa chinensis HOM05D006774 ORTHO05D008411 1.4e-110 404.1 347 57.3
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 3.0e-110 402.9 356 58.1
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 3.0e-110 402.9 356 58.1
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 3.0e-110 402.9 357 56.9
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 3.9e-110 402.5 350 58.0
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 3.9e-110 402.5 355 56.6
Lalb_Chr18g0045661 Lupinus albus HOM05D006774 ORTHO05D008411 5.1e-110 402.1 352 56.8
Sabra13G0023900 Salix brachista HOM05D006774 ORTHO05D008411 5.1e-110 402.1 357 58.0
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 8.8e-110 401.4 356 55.9
BcaB04g20150 Brassica carinata HOM05D006774 ORTHO05D008411 8.8e-110 401.4 359 57.7
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 2.0e-109 400.2 355 56.9
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 2.0e-109 400.2 340 58.8
AUR62000820 Chenopodium quinoa HOM05D006774 ORTHO05D008411 7.4e-109 398.3 320 59.1
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 7.4e-109 398.3 354 55.9
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 2.8e-108 396.4 355 55.8
Ca_05814_v3 Cicer arietinum L. HOM05D006774 ORTHO05D008411 2.8e-108 396.4 343 56.6
BcaC09g49602 Brassica carinata HOM05D006774 ORTHO05D008411 3.7e-108 396.0 356 57.0
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 8.2e-108 394.8 358 54.2
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 1.1e-107 394.4 354 57.1
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 1.8e-107 393.7 356 56.5
BraA01t02861Z Brassica rapa HOM05D006774 ORTHO05D008411 4.1e-107 392.5 356 56.5
Carub.0002s0819 Capsella rubella HOM05D006774 ORTHO05D008411 4.1e-107 392.5 357 56.9
C01p34610 Brassica napus HOM05D006774 ORTHO05D008411 5.3e-107 392.1 356 56.5
BolC1t03432H Brassica oleracea HOM05D006774 ORTHO05D008411 5.3e-107 392.1 356 56.5
Thhalv10023440m.g Eutrema salsugineum HOM05D006774 ORTHO05D008411 5.3e-107 392.1 356 56.2
Lj1g0013332 Lotus japonicus HOM05D006774 ORTHO05D008411 5.3e-107 392.1 348 56.9
AT1G54990 Arabidopsis thaliana HOM05D006774 ORTHO05D008411 1.2e-106 391.0 351 57.3
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 1.2e-106 391.0 353 55.0
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 1.2e-106 391.0 356 56.5
A01p27210 Brassica napus HOM05D006774 ORTHO05D008411 2.6e-106 389.8 356 56.2
Phvul.006G091800 Phaseolus vulgaris HOM05D006774 ORTHO05D008411 2.6e-106 389.8 346 57.2
Dinv40294 Davidia involucrata HOM05D006774 ORTHO05D008411 5.0e-105 385.6 262 74.0
Duzib128G0809 Durio zibethinus HOM05D006774 ORTHO05D008411 9.4e-104 381.3 345 55.1
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 4.7e-103 379.0 356 54.2
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 1.1e-101 374.4 357 54.9
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 7.4e-101 371.7 336 53.3
Psat0s3041g0040 Pisum sativum HOM05D006774 ORTHO05D008411 6.3e-100 368.6 361 54.6
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 1.9e-96 357.1 275 63.6
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 3.2e-96 356.3 354 49.7
ECA236G1211 Erigeron canadensis HOM05D000208 ORTHO05D000130 5.2e-94 349.0 265 63.4
CDE05G2690 Ceratophyllum demersum HOM05D006774 ORTHO05D008411 2.9e-89 333.2 351 46.7
AUR62005151 Chenopodium quinoa HOM05D006774 ORTHO05D008411 3.6e-87 326.2 272 57.0
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 4.5e-82 309.3 265 56.2
Actinidia05698 Actinidia chinensis HOM05D006774 ORTHO05D008411 5.9e-82 308.9 179 84.9
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 5.2e-78 295.8 272 51.8
unitig_736.g22755 Utricularia gibba HOM05D006774 ORTHO05D008411 2.8e-71 273.5 344 43.0
PSO478G2742 Papaver somniferum HOM05D006774 ORTHO05D008411 1.5e-56 224.6 299 45.5
Pp3c11_22860 Physcomitrium patens HOM05D006774 ORTHO05D008411 2.2e-52 210.7 363 33.3
Zm00001eb197590 Zea mays HOM05D006774 ORTHO05D008411 1.9e-51 207.6 350 37.4
PSO782G1046 Papaver somniferum HOM05D006774 ORTHO05D008411 6.0e-50 202.6 299 43.1
Os11g0544100 Oryza sativa ssp. japonica HOM05D006774 ORTHO05D008411 2.5e-48 197.2 328 37.8
Atru.chr12.689 Acer truncatum HOM05D006774 ORTHO05D008411 2.3e-41 174.1 191 50.8
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 2.1e-39 167.5 132 65.2
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 8.1e-39 165.6 132 65.2
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 1.4e-38 164.9 140 60.7
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 3.4e-37 160.2 123 67.5
SMO145G0196 Selaginella moellendorffii HOM05D006774 ORTHO05D008411 5.1e-33 146.4 370 30.0
HPP92_006104 Vanilla planifolia HOM05D006774 ORTHO05D008411 6.9e-22 109.4 130 46.2
Oeu035485.2 Olea europaea HOM05D006774 ORTHO05D001341 3.3e-16 90.5 84 58.3
Nitab4.5_0010934g0020 Nicotiana tabacum HOM05D006774 ORTHO05D008411 1.4e-06 58.5 53 52.8
VMungo1127G0243 Vigna mungo HOM05D006774 ORTHO05D008411 1.4e-06 58.5 56 53.6


User provided reference genes

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