Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23194 Vaccinium macrocarpon HOM05D005882 ORTHO05D007387 4.3e-115 417.9 202 100.0
vmacro20640 Vaccinium macrocarpon HOM05D005882 ORTHO05D007387 1.1e-102 376.7 214 88.3
Rhsim08G0067200 Rhododendron simsii HOM05D005882 ORTHO05D007387 4.4e-67 258.5 246 59.8
Rhsim08G0067400 Rhododendron simsii HOM05D005882 ORTHO05D007387 1.7e-66 256.5 244 60.2
vmacro23193 Vaccinium macrocarpon HOM05D005882 ORTHO05D007387 6.4e-66 254.6 246 59.3
Actinidia20308 Actinidia chinensis HOM05D005882 ORTHO05D007387 5.4e-65 251.5 240 58.8
Dinv41550 Davidia involucrata HOM05D005882 ORTHO05D007387 4.6e-64 248.4 246 56.1
CSS0039949 Camellia sinensis var. sinensis HOM05D005882 ORTHO05D007387 3.0e-63 245.7 244 57.0
Hma1.2p1_0018F.1_g012920 Hydrangea macrophylla HOM05D005882 ORTHO05D007387 1.5e-62 243.4 246 54.1
Atru.chr7.1254 Acer truncatum HOM05D005882 ORTHO05D007387 7.3e-62 241.1 246 54.1
Ciclev10008577m.g Citrus clementina HOM05D005882 ORTHO05D007387 8.0e-61 237.7 244 53.3
Haze_25642 Corylus avellana HOM05D005882 ORTHO05D007387 2.3e-60 236.1 246 52.4
Haze_25647 Corylus avellana HOM05D005882 ORTHO05D007387 3.1e-60 235.7 246 52.4
GSVIVG01015471001 Vitis vinifera HOM05D005882 ORTHO05D007387 3.1e-60 235.7 244 52.9
QL02p087039 Quercus lobata HOM05D005882 ORTHO05D007387 5.2e-60 235.0 245 52.2
Sed0000713 Sechium edule HOM05D005882 ORTHO05D007387 5.2e-60 235.0 244 53.3
Manes.06G059700 Manihot esculenta HOM05D005882 ORTHO05D007387 6.8e-60 234.6 246 52.4
Lj7C636G5 Lonicera japonica HOM05D005882 ORTHO05D003491 8.9e-60 234.2 244 51.6
Medtr2g055010 Medicago truncatula HOM05D005882 ORTHO05D007387 1.2e-59 233.8 247 52.2
Duzib168G0824 Durio zibethinus HOM05D005882 ORTHO05D007387 1.5e-59 233.4 246 52.0
arahy.Tifrunner.gnm1.ann1.WI060A Arachis hypogaea HOM05D005882 ORTHO05D007387 2.0e-59 233.0 244 52.0
MELO3C025286.2 Cucumis melo HOM05D005882 ORTHO05D007387 2.0e-59 233.0 247 52.6
Lj1g0016893 Lotus japonicus HOM05D005882 ORTHO05D007387 3.4e-59 232.3 246 53.7
Medtr2g054130 Medicago truncatula HOM05D005882 ORTHO05D007387 3.4e-59 232.3 246 52.0
TPR.G7510 Trifolium pratense HOM05D005882 ORTHO05D007387 4.4e-59 231.9 246 52.0
Cfa003320 Carpinus fangiana HOM05D005882 ORTHO05D007387 5.8e-59 231.5 248 52.4
DCAR_017850 Daucus carota HOM05D005882 ORTHO05D007387 5.8e-59 231.5 246 52.0
Thecc.09G119200 Theobroma cacao HOM05D005882 ORTHO05D007387 7.5e-59 231.1 246 52.0
arahy.Tifrunner.gnm1.ann1.G1MC5D Arachis hypogaea HOM05D005882 ORTHO05D007387 9.8e-59 230.7 244 50.4
Cc06_g09080 Coffea canephora HOM05D005882 ORTHO05D007387 9.8e-59 230.7 246 52.0
TWI32G0125 Tripterygium wilfordii HOM05D005882 ORTHO05D007387 9.8e-59 230.7 246 52.0
TAR636G3140 Trochodendron aralioides HOM05D001629 ORTHO05D003842 9.8e-59 230.7 246 53.3
CiPaw.03G238600 Carya illinoinensis HOM05D005882 ORTHO05D007387 1.3e-58 230.3 244 51.2
Ca_28117_v3 Cicer arietinum L. HOM05D005882 ORTHO05D007387 1.7e-58 229.9 246 51.2
Lalb_Chr08g0234911 Lupinus albus HOM05D005882 ORTHO05D007387 1.7e-58 229.9 244 50.8
CsaV3_1G031090 Cucumis sativus L. HOM05D005882 ORTHO05D007387 2.2e-58 229.6 246 52.4
Psat1g026560 Pisum sativum HOM05D005882 ORTHO05D007387 2.2e-58 229.6 247 51.8
QL02p087048 Quercus lobata HOM05D005882 ORTHO05D007387 2.2e-58 229.6 244 53.3
VMungo1309G0159 Vigna mungo HOM05D005882 ORTHO05D007387 2.2e-58 229.6 246 52.0
ClCG06G010600 Citrullus lanatus HOM05D005882 ORTHO05D007387 6.4e-58 228.0 246 52.8
AUR62011058 Chenopodium quinoa HOM05D005882 ORTHO05D007387 8.3e-58 227.6 246 51.2
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 1.1e-57 227.3 246 52.0
Aqoxy7G01989 Aquilegia oxysepala HOM05D005882 ORTHO05D007387 1.4e-57 226.9 243 51.9
Ah.14g081090 Amaranthus hybridus HOM05D005882 ORTHO05D007387 1.9e-57 226.5 246 50.8
Gohir.D05G020900 Gossypium hirsutum HOM05D005882 ORTHO05D007387 1.9e-57 226.5 246 50.4
Gorai.009G021100 Gossypium raimondii HOM05D005882 ORTHO05D007387 1.9e-57 226.5 246 50.4
COL.COLO4_34981 Corchorus olitorius HOM05D005882 ORTHO05D007387 2.4e-57 226.1 246 50.8
AUR62033437 Chenopodium quinoa HOM05D005882 ORTHO05D007387 4.1e-57 225.3 241 51.9
EL10Ac8g18577 Beta vulgaris HOM05D005882 ORTHO05D007387 5.4e-57 224.9 244 50.8
CANSAT56G3469 Cannabis sativa HOM05D005882 ORTHO05D007387 5.4e-57 224.9 246 52.0
Glyma.06G214700 Glycine max HOM05D005882 ORTHO05D007387 7.1e-57 224.6 244 50.8
C07p38700 Brassica napus HOM05D005882 ORTHO05D007387 9.2e-57 224.2 246 51.2
HanXRQChr10g0316701 Helianthus annuus HOM05D005882 ORTHO05D007387 9.2e-57 224.2 244 50.8
THA.LOC104811045 Tarenaya hassleriana HOM05D005882 ORTHO05D007387 9.2e-57 224.2 246 50.8
Gohir.A05G019800 Gossypium hirsutum HOM05D005882 ORTHO05D007387 1.6e-56 223.4 246 50.0
Phvul.009G199300 Phaseolus vulgaris HOM05D005882 ORTHO05D007387 1.6e-56 223.4 246 50.4
Cpa.g.sc75.80 Carica papaya HOM05D005882 ORTHO05D007387 2.1e-56 223.0 253 50.6
HanXRQChr10g0316681 Helianthus annuus HOM05D005882 ORTHO05D007387 2.1e-56 223.0 244 50.4
Nn2g11903 Nelumbo nucifera HOM05D005882 ORTHO05D007387 2.1e-56 223.0 244 50.4
Sc08g0006900 Simmondsia chinensis HOM05D005882 ORTHO05D007387 2.1e-56 223.0 244 49.2
MSTRG.6078 Avicennia marina HOM05D005882 ORTHO05D007387 2.7e-56 222.6 244 50.0
BolC7t44391H Brassica oleracea HOM05D005882 ORTHO05D007387 2.7e-56 222.6 246 50.8
BraA06t26872Z Brassica rapa HOM05D005882 ORTHO05D007387 2.7e-56 222.6 247 50.6
Hund00886 Selenicereus undatus HOM05D005882 ORTHO05D007387 3.5e-56 222.2 246 50.0
Thhalv10004416m.g Eutrema salsugineum HOM05D005882 ORTHO05D007387 4.6e-56 221.9 246 51.2
Prupe.7G236600 Prunus persica HOM05D005882 ORTHO05D007387 4.6e-56 221.9 244 50.0
A06p39580 Brassica napus HOM05D005882 ORTHO05D007387 6.0e-56 221.5 246 50.4
DCAR_017851 Daucus carota HOM05D005882 ORTHO05D007387 7.8e-56 221.1 193 59.1
Sp2g18290 Schrenkiella parvula HOM05D005882 ORTHO05D007387 1.0e-55 220.7 246 50.4
RcHm_v2.0_Chr2g0089501 Rosa chinensis HOM05D005882 ORTHO05D007387 1.3e-55 220.3 244 49.2
FAN23G2815 Fragaria x ananassa HOM05D000145 ORTHO05D007387 1.7e-55 219.9 244 50.0
CARHR192690 Cardamine hirsuta HOM05D005882 ORTHO05D007387 2.3e-55 219.5 247 50.2
FAN28G2467 Fragaria x ananassa HOM05D000145 ORTHO05D007387 2.3e-55 219.5 245 49.8
FvH4_1g04030 Fragaria vesca HOM05D005882 ORTHO05D007387 3.0e-55 219.2 244 49.6
FAN19G1300 Fragaria x ananassa HOM05D005882 ORTHO05D007387 3.0e-55 219.2 244 49.6
SalBow1G1298 Salvia bowleyana HOM05D005882 ORTHO05D007387 3.9e-55 218.8 247 50.6
Carub.0006s1852 Capsella rubella HOM05D005882 ORTHO05D007387 8.6e-55 217.6 247 50.6
AL6G31690 Arabidopsis lyrata HOM05D005882 ORTHO05D007387 1.1e-54 217.2 248 49.6
FAN26G2120 Fragaria x ananassa HOM05D000145 ORTHO05D007387 1.5e-54 216.9 244 49.6
MD15G1178700 Malus domestica HOM05D005882 ORTHO05D007387 1.9e-54 216.5 244 48.8
Potri.018G073501 Populus trichocarpa HOM05D005882 ORTHO05D007387 3.3e-54 215.7 244 50.0
AT5G20140 Arabidopsis thaliana HOM05D005882 ORTHO05D007387 5.6e-54 214.9 247 49.4
Solyc12g006805.1 Solanum lycopersicum HOM05D005882 ORTHO05D007387 9.5e-54 214.2 244 49.2
CAN.G713.5 Capsicum annuum HOM05D005882 ORTHO05D007387 1.6e-53 213.4 246 49.6
Sopen12g002780 Solanum pennellii HOM05D005882 ORTHO05D007387 1.6e-53 213.4 244 48.8
SGA_v2.0_scaffold114G31996 Striga asiatica HOM05D005882 ORTHO05D007387 3.6e-53 212.2 263 46.8
Eucgr.C01104 Eucalyptus grandis HOM05D005882 ORTHO05D007387 6.2e-53 211.5 246 48.0
HanXRQChr16g0511261 Helianthus annuus HOM05D005882 ORTHO05D007387 8.1e-53 211.1 243 49.8
Sabra18G0062300 Salix brachista HOM05D005882 ORTHO05D007387 8.1e-53 211.1 256 47.3
PGSC0003DMG400001057 Solanum tuberosum HOM05D005882 ORTHO05D007387 8.1e-53 211.1 246 48.8
Peaxi162Scf00170g00322 Petunia axillaris HOM05D005882 ORTHO05D007387 1.1e-52 210.7 246 49.6
unitig_21.g20470 Utricularia gibba HOM05D005882 ORTHO05D007387 1.4e-52 210.3 244 50.0
Migut.J01232 Erythranthe guttata HOM05D005882 ORTHO05D007387 2.3e-52 209.5 244 48.0
PSO170G5466 Papaver somniferum HOM05D005882 ORTHO05D007387 8.9e-52 207.6 244 47.1
Os06g0597900 Oryza sativa ssp. japonica HOM05D005882 ORTHO05D007387 1.2e-51 207.2 244 47.5
ATR0026G035 Amborella trichopoda HOM05D005882 ORTHO05D007387 2.6e-51 206.1 247 47.8
ClCG06G010680 Citrullus lanatus HOM05D005882 ORTHO05D007387 2.6e-51 206.1 204 57.4
PSO017G1905 Papaver somniferum HOM05D005882 ORTHO05D007387 2.6e-51 206.1 244 46.7
CDE04G0347 Ceratophyllum demersum HOM05D005882 ORTHO05D007387 1.1e-46 190.7 243 44.9
Aa31LG4G12580 Aethionema arabicum HOM05D005882 ORTHO05D007387 3.3e-46 189.1 233 46.8
Zm00001eb385860 Zea mays HOM05D005882 ORTHO05D007387 1.6e-45 186.8 245 45.3
Lsat_1_v5_gn_5_97440 Lactuca sativa HOM05D005882 ORTHO05D007387 1.1e-44 184.1 263 44.9
Nitab4.5_0003235g0060 Nicotiana tabacum HOM05D005882 ORTHO05D007387 2.9e-42 176.0 244 43.4
PGR142G3773 Punica granatum HOM05D005882 ORTHO05D007387 1.9e-41 173.3 244 43.4
MELO3C029668.2 Cucumis melo HOM05D005882 ORTHO05D007387 7.1e-41 171.4 206 50.0
Mapoly0088s0023 Marchantia polymorpha HOM05D005882 ORTHO05D007387 2.1e-40 169.9 240 40.8
CsaV3_1G031110 Cucumis sativus L. HOM05D005882 ORTHO05D007387 7.8e-40 167.9 205 48.3
Nitab4.5_0006991g0050 Nicotiana tabacum HOM05D005882 ORTHO05D007387 1.0e-39 167.5 244 41.0
HanXRQChr05g0148621 Helianthus annuus HOM05D005882 ORTHO05D007387 1.1e-38 164.1 158 54.4
vmacro20689 Vaccinium macrocarpon HOM05D005882 ORTHO05D007387 6.2e-37 158.3 202 52.0
HanXRQChr05g0146761 Helianthus annuus HOM05D005882 ORTHO05D007387 1.1e-36 157.5 171 49.7
Pp3c4_1490 Physcomitrium patens HOM05D005882 ORTHO05D007387 9.9e-35 151.0 245 36.7
AagrBONN_evm.TU.Sc2ySwM_344.1814 Anthoceros agrestis HOM05D005882 ORTHO05D007387 1.3e-34 150.6 244 36.9
vmacro20639 Vaccinium macrocarpon HOM05D005882 ORTHO05D007387 1.7e-34 150.2 307 36.2
PSO170G6086 Papaver somniferum HOM05D005882 ORTHO05D007387 6.4e-34 148.3 214 43.5
AUR62043908 Chenopodium quinoa HOM05D005882 ORTHO05D007387 1.9e-33 146.7 128 60.2
SMO356G0465 Selaginella moellendorffii HOM05D005882 ORTHO05D007387 3.2e-33 146.0 238 38.2
Oeu055933.1 Olea europaea HOM05D005882 ORTHO05D007387 1.1e-30 137.5 247 40.1
Nn8g39344 Nelumbo nucifera HOM05D005882 ORTHO05D007387 1.6e-29 133.7 223 39.5
Sed0002298 Sechium edule HOM05D005882 ORTHO05D007387 4.8e-29 132.1 129 54.3
AUR62044155 Chenopodium quinoa HOM05D005882 ORTHO05D007387 8.1e-29 131.3 214 40.7
HPP92_002797 Vanilla planifolia HOM05D005882 ORTHO05D007387 1.1e-28 131.0 168 45.2
SEGI_03752 Sequoiadendron giganteum HOM05D005882 ORTHO05D007387 2.2e-18 96.7 103 53.4
CBR_g37636 Chara braunii HOM05D005882 ORTHO05D007387 1.9e-17 93.6 252 29.8
MD00G1025900 Malus domestica HOM05D005882 ORTHO05D007387 5.5e-17 92.0 120 45.0
Cre16.g666550 Chlamydomonas reinhardtii HOM05D005882 ORTHO05D007387 3.0e-15 86.3 240 27.5
MD00G1026800 Malus domestica HOM05D005882 ORTHO05D007387 8.7e-15 84.7 122 42.6
MCO05G652 Micromonas commoda HOM05D005882 ORTHO05D007387 1.5e-14 84.0 253 28.1
Cre06.g304400 Chlamydomonas reinhardtii HOM05D005882 ORTHO05D007387 1.6e-13 80.5 260 26.5
HanXRQChr03g0064691 Helianthus annuus HOM05D005882 ORTHO05D007387 6.9e-12 75.1 55 61.8
Oeu058585.1 Olea europaea HOM05D005882 ORTHO05D007387 1.1e-06 57.8 91 41.8


User provided reference genes

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