Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.9e-306 1055.0 551 100.0
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 9.5e-306 1052.7 551 99.8
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 1.4e-240 836.3 566 80.0
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 5.1e-235 817.8 551 78.0
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 3.1e-216 755.4 563 73.2
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 4.2e-213 745.0 551 73.5
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 5.5e-205 718.0 551 70.4
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 1.4e-200 703.4 548 68.4
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 6.4e-193 677.9 551 65.0
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 1.4e-192 676.8 551 65.7
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 3.2e-192 675.6 551 65.3
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 7.0e-192 674.5 551 64.8
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 1.2e-191 673.7 551 65.0
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 1.0e-190 670.6 551 65.2
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 5.6e-189 664.8 551 66.1
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 3.6e-188 662.1 548 64.4
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 3.1e-187 659.1 548 64.2
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 5.2e-187 658.3 551 64.1
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 1.2e-186 657.1 551 64.8
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 2.6e-186 656.0 551 65.3
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 3.4e-186 655.6 551 64.4
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 9.8e-186 654.1 551 62.6
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 8.3e-185 651.0 551 64.4
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 1.2e-183 647.1 551 63.0
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 1.6e-183 646.7 551 64.4
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 1.3e-182 643.7 522 65.3
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 2.3e-182 642.9 548 61.9
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 5.0e-182 641.7 548 61.9
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 1.1e-181 640.6 551 63.2
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 5.6e-181 638.3 548 61.3
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 5.6e-181 638.3 546 63.0
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.1e-180 636.3 551 63.3
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 8.1e-180 634.4 551 61.3
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.3e-179 632.9 551 63.2
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 1.5e-178 630.2 544 62.5
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 4.4e-178 628.6 551 61.9
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 7.5e-178 627.9 669 56.2
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 9.8e-178 627.5 562 60.3
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 2.2e-177 626.3 551 62.4
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 4.9e-177 625.2 548 61.5
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 6.4e-177 624.8 548 62.2
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 1.1e-176 624.0 552 61.1
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 2.1e-175 619.8 554 61.0
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 2.1e-175 619.8 551 60.4
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 2.7e-175 619.4 551 61.0
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 1.5e-173 613.6 551 61.0
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 1.2e-172 610.5 548 60.4
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 2.8e-172 609.4 554 59.9
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 8.1e-172 607.8 553 60.4
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 1.1e-171 607.4 551 59.2
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 3.1e-171 605.9 544 60.8
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 3.1e-171 605.9 544 60.8
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 5.2e-171 605.1 552 59.6
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 4.4e-170 602.1 565 59.5
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 5.8e-170 601.7 593 57.8
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 3.8e-169 599.0 547 60.1
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 4.9e-169 598.6 588 58.2
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 1.1e-168 597.4 548 60.4
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 3.0e-166 589.3 548 57.5
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 1.1e-165 587.4 487 64.3
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 4.3e-165 585.5 551 58.6
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 2.1e-164 583.2 548 57.5
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 8.1e-164 581.3 551 56.8
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 1.9e-157 560.1 599 55.4
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 2.5e-157 559.7 548 56.9
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.4e-155 553.1 551 56.3
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 4.5e-154 548.9 543 54.5
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 1.7e-153 547.0 551 57.9
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 5.4e-152 542.0 543 54.1
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 1.6e-151 540.4 545 54.5
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 2.1e-151 540.0 549 54.5
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 7.9e-151 538.1 543 54.0
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 2.5e-149 533.1 492 57.9
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 4.3e-149 532.3 553 54.2
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 1.4e-147 527.3 547 52.3
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 9.0e-147 524.6 544 53.7
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 3.4e-146 522.7 471 60.9
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 3.8e-145 519.2 543 51.9
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 8.4e-145 518.1 413 67.8
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 1.2e-143 514.2 543 51.6
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 2.1e-143 513.5 569 50.6
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 4.6e-143 512.3 557 50.8
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 7.4e-141 505.0 554 51.1
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 4.8e-140 502.3 570 49.3
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 1.3e-137 494.2 543 50.8
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 2.1e-132 476.9 540 48.0
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 1.5e-130 470.7 475 55.4
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.0e-129 468.0 429 62.7
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 1.4e-128 464.2 443 58.0
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 7.9e-127 458.4 552 45.5
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 5.5e-120 435.6 416 58.4
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 7.2e-112 408.7 330 67.6
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 8.8e-110 401.7 330 66.1
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 3.1e-107 393.3 579 43.2
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 2.9e-105 386.7 549 44.1
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 2.2e-92 344.0 314 60.2
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 2.2e-92 344.0 314 60.2
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 6.3e-92 342.4 402 50.2
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 4.4e-85 319.7 537 38.0
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 2.1e-79 300.8 398 48.5
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 2.3e-78 297.4 562 34.7
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 4.4e-77 293.1 241 66.0
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.1e-72 278.5 551 34.8
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.8e-71 273.9 270 57.0
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 6.0e-66 256.1 218 63.8
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 2.3e-62 244.2 289 52.9
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 1.1e-56 225.3 215 59.5
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 3.6e-55 220.3 163 69.9
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 6.2e-55 219.5 163 67.5
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 9.9e-53 212.2 229 50.7
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 4.4e-45 186.8 485 30.3
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 9.3e-35 152.5 109 69.7
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 1.6e-34 151.8 103 74.8
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 4.6e-34 150.2 314 34.4
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.8e-30 138.3 126 56.3
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.0e-21 108.2 95 61.1
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 4.5e-21 107.1 135 43.7
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 3.8e-20 104.0 101 54.5
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-12 77.8 77 49.4
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 1.2e-10 72.4 64 59.4
MELO3C030698.2 Cucumis melo HOM05D005607 ORTHO05D169846 1.4e-09 68.9 121 40.5
MELO3C033981.2 Cucumis melo HOM05D005607 ORTHO05D166899 2.0e-08 65.1 69 56.5
SEGI_12563 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 2.2e-07 61.6 61 47.5


User provided reference genes

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