Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23105 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 1.5e-32 142.1 67 100.0
CSS0049961 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 2.6e-16 88.2 64 71.9
CSS0006810 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 1.7e-15 85.5 67 68.7
Actinidia35448 Actinidia chinensis HOM05D003745 ORTHO05D004215 2.9e-15 84.7 64 67.2
Dinv29425 Davidia involucrata HOM05D003745 ORTHO05D004215 4.2e-14 80.9 64 64.1
CSS0050359 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 9.3e-14 79.7 65 66.2
Actinidia37099 Actinidia chinensis HOM05D003745 ORTHO05D004215 5.1e-12 73.9 65 61.5
Haze_23447 Corylus avellana HOM05D003745 ORTHO05D004215 1.1e-11 72.8 64 60.9
TAR636G1780 Trochodendron aralioides HOM05D003745 ORTHO05D004215 1.1e-11 72.8 64 62.5
GSVIVG01031398001 Vitis vinifera HOM05D003745 ORTHO05D004215 1.5e-11 72.4 64 57.8
Cfa010081 Carpinus fangiana HOM05D003745 ORTHO05D004215 2.5e-11 71.6 64 59.4
Ciclev10003706m.g Citrus clementina HOM05D003745 ORTHO05D004215 2.5e-11 71.6 64 54.7
vmacro03277 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 5.6e-11 70.5 64 59.4
vmacro23109 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 5.6e-11 70.5 64 59.4
Rhsim13G0105100 Rhododendron simsii HOM05D003745 ORTHO05D004215 9.6e-11 69.7 67 65.7
TAR633G1338 Trochodendron aralioides HOM05D003745 ORTHO05D004215 1.3e-10 69.3 64 62.5
QL01p013692 Quercus lobata HOM05D003745 ORTHO05D004215 1.6e-10 68.9 63 52.4
Ciclev10029683m.g Citrus clementina HOM05D003745 ORTHO05D004215 4.8e-10 67.4 64 53.1
Thecc.05G081300 Theobroma cacao HOM05D003745 ORTHO05D004215 4.8e-10 67.4 64 56.2
Carub.0005s1042 Capsella rubella HOM05D003745 ORTHO05D004215 8.2e-10 66.6 63 57.1
Carub.0015s0003 Capsella rubella HOM05D003745 ORTHO05D004215 8.2e-10 66.6 63 57.1
CiPaw.14G103500 Carya illinoinensis HOM05D003745 ORTHO05D004215 8.2e-10 66.6 64 53.1
Rhsim01G0208400 Rhododendron simsii HOM05D003745 ORTHO05D004215 8.2e-10 66.6 48 70.8
Actinidia07207 Actinidia chinensis HOM05D003745 ORTHO05D004215 1.1e-09 66.2 49 67.3
Gohir.D01G198200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.1e-09 66.2 64 53.1
Gorai.002G242400 Gossypium raimondii HOM05D003745 ORTHO05D004215 1.1e-09 66.2 64 53.1
CiPaw.13G141100 Carya illinoinensis HOM05D003745 ORTHO05D004215 1.4e-09 65.9 65 53.8
PSO339G5919 Papaver somniferum HOM05D003745 ORTHO05D004215 1.4e-09 65.9 72 56.9
FAN11G3796 Fragaria x ananassa HOM05D003745 ORTHO05D004215 1.8e-09 65.5 65 58.5
FAN21G0140 Fragaria x ananassa HOM05D003745 ORTHO05D004215 1.8e-09 65.5 65 58.5
MD11G1157500 Malus domestica HOM05D003745 ORTHO05D004215 1.8e-09 65.5 65 55.4
Potri.004G188200 Populus trichocarpa HOM05D003745 ORTHO05D004215 1.8e-09 65.5 65 53.8
PSO384G0932 Papaver somniferum HOM05D003745 ORTHO05D004215 2.4e-09 65.1 72 55.6
TPR.G5649 Trifolium pratense HOM05D003745 ORTHO05D004215 2.4e-09 65.1 64 51.6
FvH4_3g29900 Fragaria vesca HOM05D003745 ORTHO05D004215 4.0e-09 64.3 65 58.5
Gohir.A01G209100 Gossypium hirsutum HOM05D003745 ORTHO05D004215 4.0e-09 64.3 64 51.6
RcHm_v2.0_Chr5g0055241 Rosa chinensis HOM05D003745 ORTHO05D004215 4.0e-09 64.3 65 58.5
AT3G44735 Arabidopsis thaliana HOM05D003745 ORTHO05D004215 5.3e-09 63.9 63 50.8
DCAR_006146 Daucus carota HOM05D003745 ORTHO05D004215 5.3e-09 63.9 65 52.3
Peaxi162Scf00157g00066 Petunia axillaris HOM05D003745 ORTHO05D004215 5.3e-09 63.9 62 61.3
AL5G22960 Arabidopsis lyrata HOM05D003745 ORTHO05D004215 6.9e-09 63.5 63 50.8
Gohir.D07G111300 Gossypium hirsutum HOM05D003745 ORTHO05D004215 6.9e-09 63.5 64 51.6
Thecc.09G291500 Theobroma cacao HOM05D003745 ORTHO05D004215 6.9e-09 63.5 64 51.6
TAR369G1123 Trochodendron aralioides HOM05D003745 ORTHO05D004215 6.9e-09 63.5 65 56.9
CANSAT54G1542 Cannabis sativa HOM05D003745 ORTHO05D004215 9.0e-09 63.2 66 56.1
FAN16G1639 Fragaria x ananassa HOM05D003745 ORTHO05D004215 9.0e-09 63.2 65 56.9
Sopen06g031010 Solanum pennellii HOM05D003745 ORTHO05D004215 9.0e-09 63.2 61 57.4
Solyc06g074540.4 Solanum lycopersicum HOM05D003745 ORTHO05D004215 1.2e-08 62.8 61 57.4
Gohir.A07G107300 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.5e-08 62.4 64 51.6
Sp5g16440 Schrenkiella parvula HOM05D003745 ORTHO05D004215 1.5e-08 62.4 63 49.2
Sc12g0004160 Simmondsia chinensis HOM05D003745 ORTHO05D004215 2.0e-08 62.0 62 51.6
Actinidia24179 Actinidia chinensis HOM05D003745 ORTHO05D004215 2.6e-08 61.6 41 70.7
PGSC0003DMG400007123 Solanum tuberosum HOM05D003745 ORTHO05D004215 2.6e-08 61.6 49 67.3
COL.COLO4_19298 Corchorus olitorius HOM05D003745 ORTHO05D004215 3.4e-08 61.2 56 51.8
Rhsim03G0081200 Rhododendron simsii HOM05D003745 ORTHO05D004215 3.4e-08 61.2 64 54.7
Aqoxy2G01397 Aquilegia oxysepala HOM05D003745 ORTHO05D004215 4.5e-08 60.8 48 66.7
CAN.G919.7 Capsicum annuum HOM05D003745 ORTHO05D004215 4.5e-08 60.8 64 53.1
Dinv21253 Davidia involucrata HOM05D003745 ORTHO05D004215 4.5e-08 60.8 64 54.7
TWI75G0377 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 4.5e-08 60.8 67 52.2
QL07p040518 Quercus lobata HOM05D003745 ORTHO05D004215 5.8e-08 60.5 65 55.4
Gohir.A04G066114 Gossypium hirsutum HOM05D003745 ORTHO05D004215 7.6e-08 60.1 63 52.4
Nitab4.5_0010833g0010 Nicotiana tabacum HOM05D003745 ORTHO05D004215 7.6e-08 60.1 62 54.8
Peaxi162Scf00789g00618 Petunia axillaris HOM05D003745 ORTHO05D004215 7.6e-08 60.1 61 54.1
Glyma.10G066400 Glycine max HOM05D003745 ORTHO05D004215 1.0e-07 59.7 64 51.6
Gorai.001G119600 Gossypium raimondii HOM05D003745 ORTHO05D004215 1.0e-07 59.7 64 48.4
Manes.08G021100 Manihot esculenta HOM05D003745 ORTHO05D004215 1.0e-07 59.7 55 54.5
Phvul.005G127200 Phaseolus vulgaris HOM05D003745 ORTHO05D004215 1.0e-07 59.7 64 50.0
Sabra04G0127200 Salix brachista HOM05D003745 ORTHO05D004215 1.0e-07 59.7 67 53.7
Sabra09G0117500 Salix brachista HOM05D003745 ORTHO05D004215 1.0e-07 59.7 64 50.0
Sc12g0004180 Simmondsia chinensis HOM05D003745 ORTHO05D004215 1.3e-07 59.3 62 48.4
TWI77G0164 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 1.3e-07 59.3 60 46.7
C01p34270 Brassica napus HOM05D003745 ORTHO05D004215 1.7e-07 58.9 63 49.2
BolC1t03395H Brassica oleracea HOM05D003745 ORTHO05D004215 1.7e-07 58.9 63 49.2
Nn2g14004 Nelumbo nucifera HOM05D003745 ORTHO05D004215 1.7e-07 58.9 64 50.0
SalBow6G4256 Salvia bowleyana HOM05D003745 ORTHO05D004215 1.7e-07 58.9 57 50.9
Eucgr.A01541 Eucalyptus grandis HOM05D003745 ORTHO05D004215 2.2e-07 58.5 68 51.5
Glyma.12G181700 Glycine max HOM05D003745 ORTHO05D004215 2.2e-07 58.5 64 50.0
vmacro07360 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 2.2e-07 58.5 65 50.8
Atru.chr3.3378 Acer truncatum HOM05D003745 ORTHO05D004215 2.9e-07 58.2 66 53.0
Actinidia11335 Actinidia chinensis HOM05D003745 ORTHO05D004215 2.9e-07 58.2 57 56.1
Gorai.006G109700 Gossypium raimondii HOM05D003745 ORTHO05D004215 2.9e-07 58.2 64 50.0
Duzib128G0603 Durio zibethinus HOM05D003745 ORTHO05D004215 3.8e-07 57.8 64 46.9
ECA233G0462 Erigeron canadensis HOM05D003745 ORTHO05D004215 3.8e-07 57.8 62 48.4
Manes.09G058940 Manihot esculenta HOM05D003745 ORTHO05D004215 3.8e-07 57.8 60 51.7
Manes.11G157100 Manihot esculenta HOM05D003745 ORTHO05D004215 3.8e-07 57.8 64 54.7
Potri.009G148900 Populus trichocarpa HOM05D003745 ORTHO05D004215 3.8e-07 57.8 64 48.4
Solyc11g066880.2 Solanum lycopersicum HOM05D003745 ORTHO05D004215 3.8e-07 57.8 62 45.2
MSTRG.17729 Avicennia marina HOM05D003745 ORTHO05D004215 4.9e-07 57.4 65 47.7
Sopen11g026590 Solanum pennellii HOM05D003745 ORTHO05D004215 4.9e-07 57.4 62 45.2
GSVIVG01033785001 Vitis vinifera HOM05D003745 ORTHO05D004215 4.9e-07 57.4 63 54.0
CARHR151430 Cardamine hirsuta HOM05D003745 ORTHO05D004215 6.5e-07 57.0 62 51.6
Duzib150G0771 Durio zibethinus HOM05D003745 ORTHO05D004215 6.5e-07 57.0 65 47.7
PSO063G0377 Papaver somniferum HOM05D003745 ORTHO05D004215 6.5e-07 57.0 43 69.8
SalBow3G0913 Salvia bowleyana HOM05D003745 ORTHO05D004215 6.5e-07 57.0 46 63.0
PGSC0003DMG400026535 Solanum tuberosum HOM05D003745 ORTHO05D004215 6.5e-07 57.0 62 48.4
CiPaw.09G008800 Carya illinoinensis HOM05D003745 ORTHO05D004215 8.4e-07 56.6 67 52.2
Glyma.13G319200 Glycine max HOM05D003745 ORTHO05D004215 8.4e-07 56.6 64 51.6
TWI79G1201 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 8.4e-07 56.6 64 48.4
MSTRG.21061 Avicennia marina HOM05D003745 ORTHO05D004215 1.1e-06 56.2 63 47.6
Duzib106G0076 Durio zibethinus HOM05D003745 ORTHO05D004215 1.1e-06 56.2 43 60.5
Duzib168G0884 Durio zibethinus HOM05D003745 ORTHO05D004215 1.1e-06 56.2 67 43.3
Gohir.A09G093200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.4e-06 55.8 64 48.4
Dinv19830 Davidia involucrata HOM05D003745 ORTHO05D004215 1.9e-06 55.5 61 52.5
Gohir.D09G093000 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.9e-06 55.5 64 48.4
Lsat_1_v5_gn_6_41120 Lactuca sativa HOM05D003745 ORTHO05D004215 1.9e-06 55.5 51 58.8
Cc01_g09790 Coffea canephora HOM05D003745 ORTHO05D004215 3.2e-06 54.7 64 50.0
Lj5g0022060 Lotus japonicus HOM05D003745 ORTHO05D004215 3.2e-06 54.7 64 46.9
Psat7g007360 Pisum sativum HOM05D003745 ORTHO05D004215 3.2e-06 54.7 65 49.2
Duzib093G0672 Durio zibethinus HOM05D003745 ORTHO05D004215 4.2e-06 54.3 42 59.5
HanXRQChr13g0396991 Helianthus annuus HOM05D003745 ORTHO05D004215 4.2e-06 54.3 63 54.0
PSO339G1716 Papaver somniferum HOM05D003745 ORTHO05D004215 4.2e-06 54.3 43 67.4
CAN.G644.31 Capsicum annuum HOM05D003745 ORTHO05D004215 5.5e-06 53.9 62 43.5
Duzib106G0171 Durio zibethinus HOM05D003745 ORTHO05D004215 5.5e-06 53.9 64 46.9
THA.LOC104799535 Tarenaya hassleriana HOM05D003745 ORTHO05D004215 5.5e-06 53.9 65 47.7
arahy.Tifrunner.gnm1.ann1.T88YYN Arachis hypogaea HOM05D003745 ORTHO05D004215 7.1e-06 53.5 45 55.6
BraA01t02615Z Brassica rapa HOM05D003745 ORTHO05D004215 7.1e-06 53.5 62 45.2
Medtr1g061120 Medicago truncatula HOM05D003745 ORTHO05D004215 7.1e-06 53.5 65 46.2
SalBow3G0501 Salvia bowleyana HOM05D003745 ORTHO05D004215 7.1e-06 53.5 43 62.8
FAN05G2107 Fragaria x ananassa HOM05D003745 ORTHO05D004215 9.3e-06 53.1 54 57.4
FAN05G2814 Fragaria x ananassa HOM05D003745 ORTHO05D004215 9.3e-06 53.1 54 57.4
Glyma.13G151500 Glycine max HOM05D003745 ORTHO05D004215 9.3e-06 53.1 62 48.4
MD03G1134700 Malus domestica HOM05D003745 ORTHO05D004215 9.3e-06 53.1 68 48.5
Nn6g35042 Nelumbo nucifera HOM05D003745 ORTHO05D004215 9.3e-06 53.1 64 48.4
Hund00782 Selenicereus undatus HOM05D003745 ORTHO05D004215 9.3e-06 53.1 66 40.9


User provided reference genes

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