Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23069 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 2.8e-158 562.0 288 100.0
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 4.5e-103 378.6 256 82.0
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 8.7e-83 311.2 257 68.1
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 8.7e-83 311.2 244 69.3
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 9.7e-82 307.8 253 65.6
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 6.3e-81 305.1 242 70.2
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 6.3e-81 305.1 233 68.2
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 8.2e-81 304.7 233 68.2
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 8.2e-81 304.7 260 65.4
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 3.1e-80 302.8 246 67.5
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 5.3e-80 302.0 255 65.5
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 5.3e-80 302.0 250 66.0
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 9.0e-80 301.2 242 68.2
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 9.0e-80 301.2 247 67.2
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 1.2e-79 300.8 243 68.3
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 1.2e-79 300.8 257 65.8
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 1.5e-79 300.4 243 67.5
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 1.5e-79 300.4 259 66.4
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 2.0e-79 300.1 256 64.8
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 2.6e-79 299.7 243 67.1
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 2.6e-79 299.7 259 64.5
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.6e-79 299.7 259 64.1
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 2.6e-79 299.7 243 67.9
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 3.4e-79 299.3 244 65.2
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 4.5e-79 298.9 242 66.1
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 4.5e-79 298.9 266 63.9
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 5.9e-79 298.5 256 64.5
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 5.9e-79 298.5 259 63.7
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 5.9e-79 298.5 259 65.6
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 5.9e-79 298.5 258 64.3
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 5.9e-79 298.5 243 65.0
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 7.7e-79 298.1 244 67.2
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.0e-78 297.7 256 64.5
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 1.0e-78 297.7 255 65.5
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.0e-78 297.7 259 63.7
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 1.0e-78 297.7 244 66.4
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 1.0e-78 297.7 256 64.8
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 1.3e-78 297.4 242 66.1
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 1.3e-78 297.4 243 66.3
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 1.7e-78 297.0 259 65.3
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 2.2e-78 296.6 259 64.5
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 2.2e-78 296.6 257 64.6
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 2.2e-78 296.6 244 66.0
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 2.9e-78 296.2 261 62.8
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 2.9e-78 296.2 243 66.3
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 2.9e-78 296.2 242 66.5
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 3.8e-78 295.8 259 64.1
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 3.8e-78 295.8 243 66.3
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 3.8e-78 295.8 243 65.8
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 5.0e-78 295.4 258 64.3
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 6.5e-78 295.0 257 64.2
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 8.5e-78 294.7 242 64.5
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 1.1e-77 294.3 257 63.4
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.4e-77 293.9 258 62.8
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 1.4e-77 293.9 258 62.8
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 1.9e-77 293.5 258 63.2
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 7.2e-77 291.6 244 66.0
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 7.2e-77 291.6 258 62.4
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 7.2e-77 291.6 261 63.6
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 1.2e-76 290.8 244 63.9
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 1.2e-76 290.8 257 62.3
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 1.6e-76 290.4 247 64.8
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 1.6e-76 290.4 253 65.2
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 3.6e-76 289.3 256 62.1
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 6.1e-76 288.5 240 65.4
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 1.4e-75 287.3 243 63.4
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 1.8e-75 287.0 244 64.3
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 2.3e-75 286.6 256 60.5
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 3.0e-75 286.2 242 63.2
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 3.9e-75 285.8 242 63.2
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 3.9e-75 285.8 289 57.8
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 3.9e-75 285.8 243 63.4
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 8.8e-75 284.6 243 63.8
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 1.1e-74 284.3 244 62.7
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 2.0e-74 283.5 319 51.7
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 2.0e-74 283.5 244 63.9
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 3.3e-74 282.7 244 61.9
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 3.3e-74 282.7 255 61.2
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 4.3e-74 282.3 255 61.2
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 5.7e-74 282.0 241 63.1
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 5.7e-74 282.0 259 60.6
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 5.7e-74 282.0 243 62.1
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 1.3e-73 280.8 255 61.2
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 1.7e-73 280.4 243 62.1
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 4.8e-73 278.9 257 58.8
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 6.3e-73 278.5 255 60.0
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 6.3e-73 278.5 258 60.5
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 8.2e-73 278.1 248 60.9
TAR628G0085 Trochodendron aralioides HOM05D000626 ORTHO05D003868 8.2e-73 278.1 233 65.2
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 1.1e-72 277.7 242 61.6
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 1.1e-72 277.7 256 58.6
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 1.1e-72 277.7 252 62.3
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 1.4e-72 277.3 256 59.0
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 1.4e-72 277.3 243 60.1
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 1.8e-72 276.9 244 60.7
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 2.4e-72 276.6 257 60.3
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 2.4e-72 276.6 241 62.7
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 3.1e-72 276.2 256 58.6
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 4.1e-72 275.8 256 58.6
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 5.3e-72 275.4 256 59.0
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 5.3e-72 275.4 256 58.6
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 5.3e-72 275.4 256 58.6
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 5.3e-72 275.4 256 58.6
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 6.9e-72 275.0 242 60.7
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 9.1e-72 274.6 256 59.4
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 9.1e-72 274.6 256 57.4
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 9.1e-72 274.6 255 58.8
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 1.2e-71 274.2 256 58.2
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 1.2e-71 274.2 257 58.4
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 1.2e-71 274.2 243 61.3
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.2e-71 274.2 242 60.7
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 1.5e-71 273.9 256 58.6
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 1.5e-71 273.9 244 60.2
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 3.4e-71 272.7 256 58.2
Lsat_1_v5_gn_4_144441 Lactuca sativa HOM05D000626 ORTHO05D003868 3.4e-71 272.7 247 57.5
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 4.5e-71 272.3 256 59.4
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 5.9e-71 271.9 256 59.4
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 7.7e-71 271.6 256 59.4
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 7.7e-71 271.6 246 60.6
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 1.0e-70 271.2 256 59.0
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.0e-70 271.2 241 59.8
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 1.7e-70 270.4 258 57.8
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 2.2e-70 270.0 256 59.0
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 2.9e-70 269.6 242 58.7
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 5.0e-70 268.9 263 59.3
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 8.5e-70 268.1 243 60.1
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 1.4e-69 267.3 240 60.8
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 2.5e-69 266.5 241 61.0
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 9.4e-69 264.6 242 60.7
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 4.7e-68 262.3 244 60.2
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 6.1e-68 261.9 256 57.0
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 6.1e-68 261.9 259 58.3
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 7.9e-68 261.5 249 57.8
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 1.8e-67 260.4 242 59.5
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 5.1e-67 258.8 235 58.7
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 5.1e-67 258.8 259 56.8
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 5.1e-67 258.8 242 59.5
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 4.4e-66 255.8 280 55.4
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 2.2e-65 253.4 267 53.6
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 3.2e-61 239.6 243 59.3
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 2.3e-59 233.4 246 52.8
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 2.6e-58 229.9 242 51.2
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 1.7e-57 227.3 265 51.7
CBR_g28880 Chara braunii HOM05D000626 ORTHO05D003868 2.2e-57 226.9 244 50.8
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 2.2e-57 226.9 242 49.6
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 4.8e-57 225.7 260 50.4
CSS0002315 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 2.6e-55 219.9 182 64.8
Nitab4.5_0000336g0150 Nicotiana tabacum HOM05D000626 ORTHO05D003868 5.9e-55 218.8 180 63.9
CSS0013243 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.9e-53 213.8 202 58.4
AUR62016705 Chenopodium quinoa HOM05D000626 ORTHO05D003868 3.2e-53 213.0 251 51.8
SEGI_04451 Sequoiadendron giganteum HOM05D000626 ORTHO05D003868 2.0e-50 203.8 145 69.7
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.6e-50 203.4 175 65.7
Ah.03g139660 Amaranthus hybridus HOM05D000626 ORTHO05D003868 4.8e-49 199.1 232 52.2
CSS0037823 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 4.2e-45 186.0 149 63.8
Actinidia25417 Actinidia chinensis HOM05D000626 ORTHO05D003868 4.5e-39 166.0 197 49.7
Duzib147G0490 Durio zibethinus HOM05D000626 ORTHO05D003868 1.7e-38 164.1 234 44.9
Zm00001eb095330 Zea mays HOM05D000626 ORTHO05D003868 1.6e-36 157.5 158 58.2
BcaB07g29659 Brassica carinata HOM05D000626 ORTHO05D003868 4.0e-35 152.9 208 45.7
Duzib251G0751 Durio zibethinus HOM05D000626 ORTHO05D003868 3.4e-34 149.8 175 48.6
Cre14.g614100 Chlamydomonas reinhardtii HOM05D000626 ORTHO05D003868 1.8e-32 144.1 253 36.8
MD12G1035200 Malus domestica HOM05D000626 ORTHO05D003868 2.3e-27 127.1 124 54.8
Potri.004G157900 Populus trichocarpa HOM05D000626 ORTHO05D003868 2.0e-23 114.0 130 51.5
HanXRQChr03g0075101 Helianthus annuus HOM05D000626 ORTHO05D003868 2.5e-21 107.1 78 65.4
HanXRQChr06g0170541 Helianthus annuus HOM05D000626 ORTHO05D003868 2.5e-21 107.1 78 65.4
Dinv23553 Davidia involucrata HOM05D000626 ORTHO05D003868 3.7e-17 93.2 90 61.1
SGA_v2.0_scaffold31G12912 Striga asiatica HOM05D000626 ORTHO05D003868 1.6e-15 87.8 83 55.4
HanXRQChr05g0134001 Helianthus annuus HOM05D000626 ORTHO05D003868 1.3e-14 84.7 60 66.7
HPP92_010240 Vanilla planifolia HOM05D000626 ORTHO05D003868 7.3e-13 79.0 59 62.7
SGA_v2.0_scaffold146G36209 Striga asiatica HOM05D000626 ORTHO05D003868 4.7e-12 76.3 100 42.0
Cfa019187 Carpinus fangiana HOM05D003289 ORTHO05D034141 8.9e-11 72.0 61 62.3
Cc05_g01300 Coffea canephora HOM05D004899 ORTHO05D006580 1.4e-08 64.7 90 47.8
Cpa.g.sc43.144 Carica papaya HOM05D000626 ORTHO05D003868 7.1e-08 62.4 61 52.5
SEGI_08447 Sequoiadendron giganteum HOM05D000626 ORTHO05D003868 2.7e-07 60.5 77 50.6
Nitab4.5_0022318g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.3e-06 58.2 40 72.5
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 3.0e-06 57.0 156 32.7
Potri.009G112922 Populus trichocarpa HOM05D000626 ORTHO05D003868 5.1e-06 56.2 48 62.5
Potri.T125804 Populus trichocarpa HOM05D000626 ORTHO05D003868 5.1e-06 56.2 48 62.5


User provided reference genes

Program Settings