Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23045 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 3.7e-26 121.3 89 100.0
Rhsim08G0235200 Rhododendron simsii HOM05D003238 ORTHO05D003571 1.7e-18 95.9 87 80.5
Haze_15983 Corylus avellana HOM05D003238 ORTHO05D003571 2.3e-15 85.5 88 71.6
Actinidia39103 Actinidia chinensis HOM05D003238 ORTHO05D003571 8.6e-15 83.6 87 75.9
Dinv37898 Davidia involucrata HOM05D003238 ORTHO05D003571 8.6e-15 83.6 87 73.6
Haze_25933 Corylus avellana HOM05D003238 ORTHO05D003571 3.3e-14 81.6 88 67.0
Nn6g35523 Nelumbo nucifera HOM05D003238 ORTHO05D003571 9.5e-14 80.1 88 70.5
QL05p009982 Quercus lobata HOM05D003238 ORTHO05D003571 1.2e-13 79.7 88 67.0
TAR624G1148 Trochodendron aralioides HOM05D003238 ORTHO05D003571 4.7e-13 77.8 88 70.5
Cfa003563 Carpinus fangiana HOM05D003238 ORTHO05D003571 6.1e-13 77.4 88 69.3
Cfa003064 Carpinus fangiana HOM05D003238 ORTHO05D003571 8.0e-13 77.0 56 64.3
Medtr8g017610 Medicago truncatula HOM05D003238 ORTHO05D003571 1.4e-12 76.3 87 71.3
Glyma.08G191200 Glycine max HOM05D003238 ORTHO05D003571 2.3e-12 75.5 88 67.0
CiPaw.01G223100 Carya illinoinensis HOM05D003238 ORTHO05D003571 1.2e-11 73.2 82 72.0
COL.COLO4_30681 Corchorus olitorius HOM05D003238 ORTHO05D003571 1.2e-11 73.2 56 66.1
CANSAT56G1439 Cannabis sativa HOM05D003238 ORTHO05D003571 1.5e-11 72.8 88 65.9
Glyma.07G008200 Glycine max HOM05D003238 ORTHO05D003571 2.0e-11 72.4 88 64.8
Dinv36782 Davidia involucrata HOM05D003238 ORTHO05D003571 2.6e-11 72.0 56 66.1
Sed0015805 Sechium edule HOM05D003238 ORTHO05D003571 2.6e-11 72.0 80 71.2
MELO3C024380.2 Cucumis melo HOM05D003238 ORTHO05D003571 3.4e-11 71.6 87 63.2
Gohir.D10G059800 Gossypium hirsutum HOM05D003238 ORTHO05D003571 4.4e-11 71.2 85 68.2
Gorai.011G063800 Gossypium raimondii HOM05D003238 ORTHO05D003571 4.4e-11 71.2 85 68.2
Atru.chr1.3787 Acer truncatum HOM05D003238 ORTHO05D003571 5.7e-11 70.9 88 64.8
Lj3g0007714 Lotus japonicus HOM05D003238 ORTHO05D003571 5.7e-11 70.9 86 66.3
Phvul.010G137200 Phaseolus vulgaris HOM05D003238 ORTHO05D003571 5.7e-11 70.9 88 64.8
THA.LOC109116473 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 5.7e-11 70.9 56 66.1
Thecc.06G114200 Theobroma cacao HOM05D003238 ORTHO05D003571 5.7e-11 70.9 85 69.4
arahy.Tifrunner.gnm1.ann1.7T9QNI Arachis hypogaea HOM05D003238 ORTHO05D003571 7.5e-11 70.5 47 70.2
Ciclev10026836m.g Citrus clementina HOM05D003238 ORTHO05D003571 7.5e-11 70.5 88 65.9
Aqoxy7G04029 Aquilegia oxysepala HOM05D003238 ORTHO05D003571 1.3e-10 69.7 82 69.5
Ca_23334_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 1.3e-10 69.7 88 63.6
ClCG09G000780 Citrullus lanatus HOM05D003238 ORTHO05D003571 1.7e-10 69.3 87 64.4
CsaV3_7G034700 Cucumis sativus L. HOM05D003238 ORTHO05D003571 1.7e-10 69.3 75 70.7
Lalb_Chr04g0263271 Lupinus albus HOM05D003238 ORTHO05D003571 1.7e-10 69.3 88 64.8
Actinidia25242 Actinidia chinensis HOM05D003238 ORTHO05D003571 2.2e-10 68.9 88 64.8
Duzib160G0096 Durio zibethinus HOM05D003238 ORTHO05D003571 2.2e-10 68.9 53 67.9
QL02p062228 Quercus lobata HOM05D003238 ORTHO05D003571 2.2e-10 68.9 88 65.9
DCAR_026391 Daucus carota HOM05D003238 ORTHO05D003571 2.8e-10 68.6 45 73.3
Gohir.A10G058000 Gossypium hirsutum HOM05D003238 ORTHO05D003571 2.8e-10 68.6 85 67.1
CSS0012761 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 3.7e-10 68.2 88 64.8
CSS0032672 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 3.7e-10 68.2 88 64.8
Psat4g187480 Pisum sativum HOM05D003238 ORTHO05D003571 3.7e-10 68.2 88 64.8
Actinidia39710 Actinidia chinensis HOM05D003238 ORTHO05D003571 6.3e-10 67.4 88 67.0
arahy.Tifrunner.gnm1.ann1.HS5001 Arachis hypogaea HOM05D003238 ORTHO05D003571 8.3e-10 67.0 46 67.4
Thecc.09G086100 Theobroma cacao HOM05D003238 ORTHO05D003571 8.3e-10 67.0 56 57.1
Nitab4.5_0000255g0290 Nicotiana tabacum HOM05D003238 ORTHO05D003571 1.1e-09 66.6 72 73.6
Nitab4.5_0005918g0030 Nicotiana tabacum HOM05D003238 ORTHO05D003571 1.1e-09 66.6 88 65.9
Potri.017G119600 Populus trichocarpa HOM05D003238 ORTHO05D003571 1.1e-09 66.6 82 70.7
PSO210G1081 Papaver somniferum HOM05D003238 ORTHO05D003571 1.4e-09 66.2 88 67.0
PSO210G2488 Papaver somniferum HOM05D003238 ORTHO05D003571 1.8e-09 65.9 88 63.6
vmacro17137 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 3.1e-09 65.1 88 62.5
ATR0789G083 Amborella trichopoda HOM05D003238 ORTHO05D003571 7.0e-09 63.9 88 71.6
Cpa.g.sc25.72 Carica papaya HOM05D003238 ORTHO05D003571 1.2e-08 63.2 56 64.3
Oeu017609.1 Olea europaea HOM05D003238 ORTHO05D003571 1.2e-08 63.2 75 70.7
TWI79G0340 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 1.6e-08 62.8 88 63.6
Cc04_g01740 Coffea canephora HOM05D003238 ORTHO05D003571 2.0e-08 62.4 79 63.3
MBI04_g36912_MAGBIO Magnolia biondii HOM05D003238 ORTHO05D003571 2.0e-08 62.4 74 67.6
Nitab4.5_0002824g0070 Nicotiana tabacum HOM05D003238 ORTHO05D003571 2.7e-08 62.0 57 57.9
Nitab4.5_0006462g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 2.7e-08 62.0 41 68.3
Nitab4.5_0009992g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 3.5e-08 61.6 57 57.9
Sed0010916 Sechium edule HOM05D003238 ORTHO05D003571 3.5e-08 61.6 46 65.2
Rhsim05G0017200 Rhododendron simsii HOM05D003238 ORTHO05D003571 5.9e-08 60.8 61 55.7
ECA247G2422 Erigeron canadensis HOM05D003238 ORTHO05D003571 7.8e-08 60.5 57 59.6
Hma1.2p1_0169F.1_g074900 Hydrangea macrophylla HOM05D003238 ORTHO05D003571 7.8e-08 60.5 86 65.1
Manes.11G024400 Manihot esculenta HOM05D003238 ORTHO05D003571 1.0e-07 60.1 56 58.9
GSVIVG01016802001 Vitis vinifera HOM05D003238 ORTHO05D003571 1.0e-07 60.1 56 60.7
CARHR065610 Cardamine hirsuta HOM05D003238 ORTHO05D003571 1.3e-07 59.7 58 56.9
VMungo0720G2789 Vigna mungo HOM05D003238 ORTHO05D003571 1.3e-07 59.7 45 66.7
MSTRG.6003 Avicennia marina HOM05D003238 ORTHO05D003571 1.7e-07 59.3 89 58.4
PGR102G1556 Punica granatum HOM05D003238 ORTHO05D003571 1.7e-07 59.3 51 66.7
PGSC0003DMG400000275 Solanum tuberosum HOM05D003238 ORTHO05D003571 2.9e-07 58.5 89 59.6
PGSC0003DMG400004852 Solanum tuberosum HOM05D003238 ORTHO05D003571 2.9e-07 58.5 78 73.1
AT1G72690 Arabidopsis thaliana HOM05D003238 ORTHO05D003571 3.9e-07 58.2 58 58.6
CDE05G2517 Ceratophyllum demersum HOM05D003238 ORTHO05D003571 3.9e-07 58.2 46 63.0
TPR.G27679 Trifolium pratense HOM05D003238 ORTHO05D003571 3.9e-07 58.2 83 63.9
HPP92_007657 Vanilla planifolia HOM05D003238 ORTHO05D003571 3.9e-07 58.2 42 69.0
Peaxi162Scf00498g00436 Petunia axillaris HOM05D003238 ORTHO05D003571 5.0e-07 57.8 74 70.3
Hund20825 Selenicereus undatus HOM05D003238 ORTHO05D003571 5.0e-07 57.8 88 58.0
Solyc12g008950.2 Solanum lycopersicum HOM05D003238 ORTHO05D003571 5.0e-07 57.8 76 69.7
Manes.16G100500 Manihot esculenta HOM05D003238 ORTHO05D003571 1.1e-06 56.6 43 62.8
Prupe.7G206700 Prunus persica HOM05D003238 ORTHO05D003571 1.1e-06 56.6 56 55.4
RcHm_v2.0_Chr2g0093691 Rosa chinensis HOM05D003238 ORTHO05D003571 1.9e-06 55.8 57 56.1
Sc15g0000270 Simmondsia chinensis HOM05D003238 ORTHO05D003571 1.9e-06 55.8 42 64.3
Solyc06g062765.1 Solanum lycopersicum HOM05D003238 ORTHO05D003571 1.9e-06 55.8 83 66.3
Sopen06g022220 Solanum pennellii HOM05D003238 ORTHO05D003571 1.9e-06 55.8 83 65.1
Sopen12g003880 Solanum pennellii HOM05D003238 ORTHO05D003571 1.9e-06 55.8 82 63.4
HPP92_005498 Vanilla planifolia HOM05D003238 ORTHO05D003571 1.9e-06 55.8 46 63.0
Gorai.001G012800 Gossypium raimondii HOM05D003238 ORTHO05D003571 2.5e-06 55.5 48 56.2
Potri.004G095300 Populus trichocarpa HOM05D003238 ORTHO05D003571 2.5e-06 55.5 58 58.6
CiPaw.03G213000 Carya illinoinensis HOM05D003238 ORTHO05D003571 3.3e-06 55.1 43 60.5
Duzib168G0217 Durio zibethinus HOM05D003238 ORTHO05D003571 3.3e-06 55.1 54 50.0
Lj4C292G2 Lonicera japonica HOM05D003238 ORTHO05D003571 3.3e-06 55.1 82 59.8
Eucgr.C00871 Eucalyptus grandis HOM05D003238 ORTHO05D003571 4.3e-06 54.7 86 54.7
FAN23G0786 Fragaria x ananassa HOM05D003238 ORTHO05D003571 4.3e-06 54.7 89 58.4
FAN26G0800 Fragaria x ananassa HOM05D003238 ORTHO05D003571 4.3e-06 54.7 89 55.1
MD15G1209800 Malus domestica HOM05D003238 ORTHO05D003571 4.3e-06 54.7 88 55.7
FvH4_1g07820 Fragaria vesca HOM05D003238 ORTHO05D003571 5.6e-06 54.3 89 55.1
FAN19G2918 Fragaria x ananassa HOM05D003238 ORTHO05D003571 5.6e-06 54.3 89 55.1
Potri.006G148000 Populus trichocarpa HOM05D003238 ORTHO05D003571 9.5e-06 53.5 57 57.9


User provided reference genes

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