Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23035 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 1.0e-231 806.6 480 100.0
vmacro00665 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 7.5e-182 641.0 543 74.2
vmacro22505 Vaccinium macrocarpon HOM05D015585 ORTHO05D015199 1.1e-121 441.0 510 59.0
vmacro00660 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 2.2e-88 330.5 532 43.6
Rhsim11G0004700 Rhododendron simsii HOM05D015585 ORTHO05D000385 1.2e-59 235.0 327 46.5
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.5e-36 158.3 349 33.8
vmacro00658 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 3.8e-32 143.7 476 37.8
vmacro19065 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 3.2e-31 140.6 139 59.0
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 7.1e-31 139.4 613 35.6
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.0e-29 135.6 535 37.9
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.7e-29 132.5 509 31.6
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.3e-28 130.2 567 35.1
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 4.8e-27 126.7 156 50.0
vmacro21218 Vaccinium macrocarpon HOM05D015585 ORTHO05D010960 1.1e-26 125.6 156 48.7
Rhsim11G0004600 Rhododendron simsii HOM05D043423 ORTHO05D000385 3.1e-18 97.4 184 40.8
Rhsim13G0228900 Rhododendron simsii HOM05D001309 ORTHO05D000385 5.3e-18 96.7 197 39.6
Dinv04171 Davidia involucrata HOM05D010146 ORTHO05D000385 2.4e-15 87.8 101 42.6
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 4.2e-15 87.0 101 42.6
Rhsim11G0013700 Rhododendron simsii HOM05D001309 ORTHO05D000385 7.1e-15 86.3 478 27.0
CSS0022677 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.5e-14 84.0 99 45.5
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.6e-14 83.6 184 34.2
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-13 82.0 170 35.3
CSS0012868 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-13 81.6 143 37.1
CSS0019574 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-13 81.6 143 36.4
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.3e-13 81.3 103 42.7
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-13 79.7 87 44.8
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-13 79.7 87 44.8
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-13 79.7 87 44.8
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-13 79.7 87 44.8
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-13 79.7 87 44.8
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-13 79.7 87 44.8
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-13 79.7 87 46.0
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-13 79.7 87 44.8
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-12 78.6 87 43.7
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.9e-12 78.2 99 44.4
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.6e-12 76.6 96 44.8
CSS0038015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-11 75.5 148 33.8
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 4.8e-11 73.6 80 46.2
CSS0030618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.2e-11 73.2 74 48.6
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.1e-11 72.8 74 48.6
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.1e-11 72.8 74 48.6
CSS0035704 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-10 72.0 74 48.6
CSS0007280 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-10 71.6 74 47.3
CSS0040728 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.0e-10 70.5 74 47.3
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 5.3e-10 70.1 134 38.8
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 9.0e-10 69.3 88 43.2
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 9.0e-10 69.3 100 45.0
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 9.0e-10 69.3 102 39.2
Cc00_g05340 Coffea canephora HOM05D005012 ORTHO05D005886 1.2e-09 68.9 81 48.1
RcHm_v2.0_Chr7g0230481 Rosa chinensis HOM05D005012 ORTHO05D005886 2.0e-09 68.2 79 43.0
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.6e-09 67.8 109 33.9
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.5e-09 67.0 128 33.6
Rhsim05G0024300 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.5e-09 67.0 74 43.2
Rhsim05G0034600 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.5e-09 67.0 74 43.2
Atru.chr3.1415 Acer truncatum HOM05D005012 ORTHO05D005886 1.0e-08 65.9 87 39.1
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 1.0e-08 65.9 90 40.0
vmacro07151 Vaccinium macrocarpon HOM05D014212 ORTHO05D000385 1.0e-08 65.9 232 24.1
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 1.7e-08 65.1 123 35.8
vmacro00652 Vaccinium macrocarpon HOM05D001309 ORTHO05D000385 1.7e-08 65.1 92 43.5
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.9e-08 64.3 121 34.7
RcHm_v2.0_Chr1g0341871 Rosa chinensis HOM05D005012 ORTHO05D005886 2.9e-08 64.3 77 42.9
PGSC0003DMG400015737 Solanum tuberosum HOM05D001309 ORTHO05D000385 2.9e-08 64.3 80 43.8
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.9e-08 64.3 73 45.2
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 3.8e-08 63.9 123 35.8
Atru.chr1.3691 Acer truncatum HOM05D005012 ORTHO05D005886 4.9e-08 63.5 187 26.2
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 4.9e-08 63.5 118 36.4
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 6.5e-08 63.2 118 36.4
vmacro12659 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 6.5e-08 63.2 137 31.4
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 8.4e-08 62.8 223 26.9
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-07 62.4 114 31.6
FvH4_1g28181 Fragaria vesca HOM05D005012 ORTHO05D005886 1.4e-07 62.0 131 31.3
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.4e-07 62.0 77 42.9
RcHm_v2.0_Chr7g0222641 Rosa chinensis HOM05D005012 ORTHO05D005886 1.4e-07 62.0 96 34.4
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.9e-07 61.6 84 39.3
Rhsim07G0167600 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.9e-07 61.6 74 41.9
TAR374G1072 Trochodendron aralioides HOM05D001201 ORTHO05D001100 1.9e-07 61.6 165 30.9
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 2.5e-07 61.2 137 39.4
Rhsim07G0133200 Rhododendron simsii HOM05D005012 ORTHO05D005886 3.2e-07 60.8 169 33.1
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 4.2e-07 60.5 147 32.0
FvH4_4g09791 Fragaria vesca HOM05D000107 ORTHO05D000062 4.2e-07 60.5 124 31.5
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.2e-07 60.5 191 26.7
CSS0013398 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.1e-07 59.7 127 36.2
Lj9A299T35 Lonicera japonica HOM05D001309 ORTHO05D000385 7.1e-07 59.7 86 39.5
TAR383G0561 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.1e-07 59.7 180 27.2
FAN28G1702 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.3e-07 59.3 74 43.2
Lj5A265G37 Lonicera japonica HOM05D005763 ORTHO05D005970 1.2e-06 58.9 194 29.4
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 1.2e-06 58.9 195 26.2
vmacro22380 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 1.2e-06 58.9 151 27.8
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 2.1e-06 58.2 137 33.6
RcHm_v2.0_Chr6g0306081 Rosa chinensis HOM05D005012 ORTHO05D005886 2.1e-06 58.2 133 33.8
Rhsim09G0006300 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.7e-06 57.8 65 43.1
CSS0044513 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 3.5e-06 57.4 106 38.7
FvH4_4g09832 Fragaria vesca HOM05D005012 ORTHO05D005886 3.5e-06 57.4 131 29.8
FvH4_5g37430 Fragaria vesca HOM05D000107 ORTHO05D000062 3.5e-06 57.4 128 31.2
Zm00001eb420260 Zea mays HOM05D002305 ORTHO05D000385 3.5e-06 57.4 128 32.8
FAN17G1574 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.6e-06 57.0 75 44.0
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 6.0e-06 56.6 118 38.1
CSS0024121 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 7.9e-06 56.2 112 38.4
CSS0038787 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 7.9e-06 56.2 112 38.4
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 7.9e-06 56.2 133 32.3
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 7.9e-06 56.2 133 32.3


User provided reference genes

Program Settings