Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 3.6e-291 1004.2 508 100.0
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 3.5e-262 907.9 506 90.9
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 1.1e-244 849.7 507 83.4
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 1.4e-242 842.8 507 83.0
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 7.5e-241 837.0 508 82.5
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 3.2e-239 831.6 506 83.2
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 7.8e-238 827.0 504 82.1
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 7.8e-238 827.0 504 81.9
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.3e-237 826.2 504 81.9
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 3.0e-237 825.1 504 82.5
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 5.1e-237 824.3 505 82.2
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 6.6e-237 823.9 506 80.8
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 1.9e-236 822.4 504 82.3
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 2.5e-236 822.0 506 80.8
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 4.3e-236 821.2 502 82.5
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 3.6e-235 818.1 506 79.1
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 1.1e-234 816.6 496 82.3
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 6.8e-234 813.9 504 81.5
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 6.8e-234 813.9 504 80.6
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 6.8e-234 813.9 506 80.2
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 2.0e-233 812.4 504 80.6
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 5.8e-233 810.8 508 80.1
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 7.6e-233 810.4 503 80.7
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 7.6e-233 810.4 505 80.0
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 1.3e-232 809.7 504 80.4
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 3.8e-232 808.1 507 80.5
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 5.4e-231 804.3 504 80.0
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 1.6e-230 802.7 504 80.0
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 5.1e-229 797.7 505 79.4
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 8.7e-229 797.0 504 80.6
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 8.7e-229 797.0 494 79.6
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 1.5e-228 796.2 505 79.0
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 2.5e-228 795.4 493 80.7
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 4.3e-228 794.7 507 78.9
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 9.6e-228 793.5 504 78.8
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 1.6e-227 792.7 490 80.8
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 1.6e-227 792.7 488 80.3
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 1.8e-226 789.3 505 77.6
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 1.2e-225 786.6 494 80.0
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 1.5e-225 786.2 507 77.7
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 1.5e-225 786.2 503 77.5
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 1.3e-224 783.1 504 77.0
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 2.2e-224 782.3 504 77.6
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 2.2e-224 782.3 506 77.7
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 3.8e-224 781.6 505 77.2
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 3.8e-224 781.6 479 81.2
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 1.1e-223 780.0 504 76.8
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 4.2e-223 778.1 473 81.2
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 7.1e-223 777.3 498 78.1
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 7.1e-223 777.3 488 78.5
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 9.3e-223 776.9 498 77.5
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 9.3e-223 776.9 477 80.3
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 1.2e-222 776.5 501 77.6
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 3.5e-222 775.0 501 77.6
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 7.8e-222 773.9 504 76.6
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 7.8e-222 773.9 488 79.1
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 7.8e-222 773.9 503 76.7
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 3.0e-221 771.9 491 78.2
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 8.7e-221 770.4 478 78.2
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 8.7e-221 770.4 478 78.2
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 8.7e-221 770.4 497 76.7
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 3.3e-220 768.5 472 80.7
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 1.3e-219 766.5 491 77.4
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 3.6e-219 765.0 496 77.8
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 4.8e-219 764.6 487 78.9
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 8.1e-219 763.8 490 76.9
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 1.4e-218 763.1 487 78.4
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 1.8e-218 762.7 487 78.4
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 4.0e-218 761.5 487 78.2
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 1.5e-217 759.6 452 84.5
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 2.0e-217 759.2 506 74.3
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 5.8e-217 757.7 489 76.3
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 9.9e-217 756.9 492 76.4
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 1.3e-216 756.5 474 78.5
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 1.3e-216 756.5 504 75.2
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 1.7e-216 756.1 474 78.9
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 2.2e-216 755.7 493 77.1
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 4.9e-216 754.6 506 74.3
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 8.4e-216 753.8 490 76.7
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 8.4e-216 753.8 478 77.4
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 1.4e-215 753.1 506 74.1
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 1.9e-215 752.7 488 76.2
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 2.4e-215 752.3 482 77.4
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.2e-214 750.0 485 76.3
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 1.2e-214 750.0 485 76.3
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 3.5e-214 748.4 493 76.3
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.1e-212 743.4 452 82.1
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 2.5e-212 742.3 471 77.1
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 7.4e-212 740.7 485 75.9
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 1.4e-210 736.5 478 74.7
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 4.9e-208 728.0 481 74.8
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 8.4e-208 727.2 439 82.7
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 5.5e-207 724.5 448 81.9
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 7.4e-204 714.1 503 72.2
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 3.1e-202 708.8 478 74.3
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 1.2e-201 706.8 477 74.0
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 1.7e-200 703.0 491 71.9
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 2.1e-198 696.0 503 68.4
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 9.0e-194 680.6 494 67.2
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 9.0e-194 680.6 494 67.2
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.5e-193 679.9 494 67.2
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 3.8e-192 675.2 409 80.7
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 6.5e-192 674.5 479 66.4
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 1.8e-189 666.4 482 72.2
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 8.8e-189 664.1 505 68.3
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 3.3e-188 662.1 486 65.8
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 2.4e-186 656.0 508 68.9
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 1.5e-185 653.3 476 67.2
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 2.2e-184 649.4 446 75.1
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 9.4e-183 644.0 461 68.5
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 2.3e-173 612.8 501 63.1
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 1.3e-171 607.1 392 76.0
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 1.4e-165 587.0 477 60.0
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 1.7e-163 580.1 478 59.2
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 4.8e-163 578.6 476 57.6
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 9.1e-162 574.3 485 59.2
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 1.5e-159 567.0 457 67.0
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 2.8e-150 536.2 383 74.7
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 1.2e-145 520.8 477 53.2
Lj2P123T37 Lonicera japonica HOM05D005722 ORTHO05D007934 2.9e-139 499.6 324 79.6
Sc20g0005800 Simmondsia chinensis HOM05D005722 ORTHO05D007934 1.1e-135 487.6 329 74.8
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 4.6e-129 465.7 491 49.3
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 6.8e-125 451.8 494 49.0
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 2.1e-73 280.8 164 82.9
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 1.1e-63 248.4 480 33.1
Haze_02843 Corylus avellana HOM05D005722 ORTHO05D029153 1.0e-56 225.3 146 75.3
Sc20g0005790 Simmondsia chinensis HOM05D005722 ORTHO05D029153 8.8e-40 169.1 98 80.6
Pp3s34_270 Physcomitrium patens HOM05D005722 ORTHO05D317165 1.8e-37 161.4 428 25.7
TPR.G39511 Trifolium pratense HOM05D005722 ORTHO05D029153 4.4e-31 140.2 71 90.1
Lsat_1_v5_gn_4_152401 Lactuca sativa HOM05D005722 ORTHO05D007934 2.6e-23 114.4 80 75.0
MCO11G808 Micromonas commoda HOM05D005722 ORTHO05D268580 7.8e-20 102.8 450 25.8
FAN14G5603 Fragaria x ananassa HOM05D005722 ORTHO05D029153 1.9e-18 98.2 64 75.0
MCO10G252 Micromonas commoda HOM05D005722 ORTHO05D270642 2.1e-17 94.7 441 26.5
Cfa016469 Carpinus fangiana HOM05D005722 ORTHO05D125356 9.9e-07 59.3 28 92.9


User provided reference genes

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