Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 8.7e-196 686.8 352 100.0
Rhsim07G0137000 Rhododendron simsii HOM05D001237 ORTHO05D009110 2.0e-163 579.3 327 87.8
Actinidia18147 Actinidia chinensis HOM05D001237 ORTHO05D009110 2.6e-155 552.4 324 83.6
CSS0010822 Camellia sinensis var. sinensis HOM05D001237 ORTHO05D009110 1.5e-147 526.6 328 80.8
GSVIVG01022633001 Vitis vinifera HOM05D001237 ORTHO05D009110 3.4e-147 525.4 323 78.6
TAR629G2165 Trochodendron aralioides HOM05D001237 ORTHO05D009110 1.0e-140 503.8 323 76.2
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 1.7e-138 496.5 326 74.2
Hma1.2p1_0979F.1_g243590 Hydrangea macrophylla HOM05D001237 ORTHO05D009110 6.4e-138 494.6 336 75.6
CiPaw.12G070700 Carya illinoinensis HOM05D001237 ORTHO05D009110 1.9e-137 493.0 323 75.2
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 3.2e-137 492.3 337 72.4
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 2.0e-136 489.6 323 75.2
Solyc08g075990.3 Solanum lycopersicum HOM05D001237 ORTHO05D009110 8.6e-135 484.2 323 74.3
Dinv15842 Davidia involucrata HOM05D001237 ORTHO05D009110 1.1e-132 477.2 290 79.7
Cc00_g24190 Coffea canephora HOM05D001237 ORTHO05D009110 1.4e-132 476.9 323 72.8
CAN.G773.2 Capsicum annuum HOM05D001237 ORTHO05D009110 2.3e-132 476.1 323 74.3
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 5.8e-131 471.5 324 74.1
Nitab4.5_0002735g0030 Nicotiana tabacum HOM05D001237 ORTHO05D009110 9.8e-131 470.7 323 72.8
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 1.2e-128 463.8 270 82.6
Nitab4.5_0001033g0010 Nicotiana tabacum HOM05D001237 ORTHO05D009110 1.2e-128 463.8 323 71.8
Cpa.g.sc24.66 Carica papaya HOM05D001237 ORTHO05D009110 4.6e-128 461.8 325 71.4
RcHm_v2.0_Chr7g0213081 Rosa chinensis HOM05D001237 ORTHO05D009110 6.0e-128 461.5 326 71.2
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 7.8e-128 461.1 324 71.9
FAN18G3541 Fragaria x ananassa HOM05D001237 ORTHO05D009110 5.1e-127 458.4 324 71.3
FAN08G1241 Fragaria x ananassa HOM05D001237 ORTHO05D009110 6.6e-127 458.0 324 71.0
Prupe.5G022700 Prunus persica HOM05D001237 ORTHO05D009110 1.1e-126 457.2 329 72.3
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 1.5e-126 456.8 287 77.0
FAN18G4185 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.5e-126 456.8 324 71.0
FvH4_5g23760 Fragaria vesca HOM05D001237 ORTHO05D009110 1.9e-126 456.4 324 71.0
Oeu038592.1 Olea europaea HOM05D001237 ORTHO05D009110 1.2e-125 453.8 316 72.5
Potri.003G100300 Populus trichocarpa HOM05D001237 ORTHO05D009110 2.8e-125 452.6 325 72.3
CANSAT25G2402 Cannabis sativa HOM05D001237 ORTHO05D009110 8.1e-125 451.1 301 75.4
Cfa012569 Carpinus fangiana HOM05D001237 ORTHO05D009110 1.5e-123 446.8 275 78.9
CsaV3_3G001140 Cucumis sativus L. HOM05D001237 ORTHO05D009110 1.5e-123 446.8 269 81.4
PGR042G3955 Punica granatum HOM05D001237 ORTHO05D009110 4.4e-123 445.3 329 70.8
Migut.E01337 Erythranthe guttata HOM05D001237 ORTHO05D009110 1.3e-122 443.7 330 68.5
DCAR_024946 Daucus carota HOM05D001577 ORTHO05D009110 4.9e-122 441.8 268 79.5
Lj2g0015654 Lotus japonicus HOM05D001237 ORTHO05D009110 6.4e-122 441.4 327 69.7
Sed0014021 Sechium edule HOM05D001237 ORTHO05D009110 6.4e-122 441.4 316 71.5
MELO3C013804.2 Cucumis melo HOM05D001237 ORTHO05D009110 1.1e-121 440.7 287 76.7
PSO782G3536 Papaver somniferum HOM05D001237 ORTHO05D009110 1.4e-121 440.3 271 76.8
Duzib084G0831 Durio zibethinus HOM05D001237 ORTHO05D009110 2.7e-120 436.0 276 77.2
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 2.7e-120 436.0 275 77.5
ECA233G0844 Erigeron canadensis HOM05D001237 ORTHO05D009110 3.5e-120 435.6 314 70.7
THA.LOC104812764 Tarenaya hassleriana HOM05D001237 ORTHO05D009110 4.6e-120 435.3 320 68.4
Phvul.002G132200 Phaseolus vulgaris HOM05D001237 ORTHO05D009110 6.0e-120 434.9 327 69.1
COL.COLO4_27340 Corchorus olitorius HOM05D001237 ORTHO05D009110 1.3e-119 433.7 309 69.6
Sc07g0008510 Simmondsia chinensis HOM05D001237 ORTHO05D009110 3.0e-119 432.6 279 75.3
VMungo1215G0366 Vigna mungo HOM05D001237 ORTHO05D000217 3.9e-119 432.2 326 68.7
Eucgr.E01249 Eucalyptus grandis HOM05D001237 ORTHO05D009110 6.6e-119 431.4 332 66.6
TPR.G29137 Trifolium pratense HOM05D001237 ORTHO05D009110 1.1e-118 430.6 296 72.6
Gohir.A08G151200 Gossypium hirsutum HOM05D001237 ORTHO05D009110 3.3e-118 429.1 276 76.1
Medtr5g027220 Medicago truncatula HOM05D001237 ORTHO05D009110 4.3e-118 428.7 313 70.0
Gorai.004G179700 Gossypium raimondii HOM05D001237 ORTHO05D009110 2.1e-117 426.4 274 76.3
Psat2g141080 Pisum sativum HOM05D001237 ORTHO05D009110 2.1e-117 426.4 305 69.8
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 2.8e-117 426.0 328 67.1
Lalb_Chr05g0215521 Lupinus albus HOM05D001237 ORTHO05D009110 1.4e-116 423.7 286 73.4
AUR62007400 Chenopodium quinoa HOM05D001237 ORTHO05D009110 2.4e-116 422.9 324 66.0
Lsat_1_v5_gn_6_17621 Lactuca sativa HOM05D001237 ORTHO05D009110 2.4e-116 422.9 331 66.8
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 4.0e-116 422.2 320 66.9
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 5.2e-116 421.8 320 66.6
Ah.07g201260 Amaranthus hybridus HOM05D001237 ORTHO05D009110 1.5e-115 420.2 288 72.6
EL10Ac5g11946 Beta vulgaris HOM05D001237 ORTHO05D009110 2.0e-115 419.9 297 69.7
ATR0829G072 Amborella trichopoda HOM05D001237 ORTHO05D009110 1.7e-114 416.8 284 71.8
Thhalv10004626m.g Eutrema salsugineum HOM05D001237 ORTHO05D009110 1.6e-112 410.2 275 72.7
Zm00001eb208900 Zea mays HOM05D001237 ORTHO05D009110 6.0e-112 408.3 255 78.4
BraA06t26806Z Brassica rapa HOM05D001237 ORTHO05D009110 7.8e-112 407.9 291 69.4
A06p38920 Brassica napus HOM05D001237 ORTHO05D009110 1.0e-111 407.5 275 71.6
Ca_25144_v3 Cicer arietinum L. HOM05D001237 ORTHO05D000217 1.7e-111 406.8 256 77.7
Aa31LG9G15560 Aethionema arabicum HOM05D001237 ORTHO05D009110 1.1e-110 404.1 286 70.6
C07p39410 Brassica napus HOM05D001237 ORTHO05D009110 1.1e-110 404.1 275 71.6
Peaxi162Scf00408g00416 Petunia axillaris HOM05D001237 ORTHO05D009110 1.9e-110 403.3 276 74.6
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 1.9e-110 403.3 275 70.9
Glyma.01G147700 Glycine max HOM05D001237 ORTHO05D009110 3.6e-109 399.1 325 65.2
CDE02G0540 Ceratophyllum demersum HOM05D001237 ORTHO05D009110 5.3e-108 395.2 249 77.1
BolC7t44460H Brassica oleracea HOM05D001237 ORTHO05D009110 2.2e-106 389.8 265 70.9
HanXRQChr08g0226791 Helianthus annuus HOM05D001237 ORTHO05D009110 2.8e-101 372.9 292 67.8
Sabra03G0068500 Salix brachista HOM05D001237 ORTHO05D009110 1.8e-100 370.2 299 65.9
Glyma.20G094800 Glycine max HOM05D001237 ORTHO05D009110 3.1e-100 369.4 226 80.1
BcaC06g30758 Brassica carinata HOM05D001237 ORTHO05D009110 4.5e-99 365.5 275 66.5
ClCG10G001120 Citrullus lanatus HOM05D001237 ORTHO05D009110 4.5e-99 365.5 320 62.5
SGA_v2.0_scaffold111G31373 Striga asiatica HOM05D001237 ORTHO05D009110 4.2e-97 359.0 203 83.3
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 9.3e-97 357.8 296 60.1
CARHR182950 Cardamine hirsuta HOM05D001237 ORTHO05D009110 3.1e-92 342.8 213 76.1
unitig_747.g21357 Utricularia gibba HOM05D000467 ORTHO05D000379 2.9e-90 336.3 286 61.9
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 3.8e-90 335.9 279 59.5
SMO356G0709 Selaginella moellendorffii HOM05D001237 ORTHO05D009110 3.3e-86 322.8 262 56.5
CBR_g18855 Chara braunii HOM05D001237 ORTHO05D009110 3.3e-78 296.2 216 64.4
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis HOM05D001237 ORTHO05D009110 2.2e-77 293.5 243 57.6
QL12p001026 Quercus lobata HOM05D001237 ORTHO05D009110 1.6e-72 277.3 211 68.2
arahy.Tifrunner.gnm1.ann1.3EKV6C Arachis hypogaea HOM05D001237 ORTHO05D009110 1.0e-71 274.6 296 55.1
arahy.Tifrunner.gnm1.ann1.YIEM7C Arachis hypogaea HOM05D001237 ORTHO05D009110 1.0e-71 274.6 296 55.1
Glyma.09G212000 Glycine max HOM05D001237 ORTHO05D009110 1.9e-65 253.8 172 74.4
Hund11115 Selenicereus undatus HOM05D001237 ORTHO05D009110 6.1e-64 248.8 153 79.1
SEGI_12758 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 9.1e-60 235.0 135 78.5
RcHm_v2.0_Chr7g0213121 Rosa chinensis HOM05D001237 ORTHO05D009110 4.1e-52 209.5 236 50.8
Cre04.g212500 Chlamydomonas reinhardtii HOM05D001237 ORTHO05D009110 1.6e-48 197.6 316 39.6
PRCOL_00004822 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 2.6e-46 190.3 271 42.1
HPP92_025933 Vanilla planifolia HOM05D001237 ORTHO05D009110 3.7e-45 186.4 119 79.0
MCO15G307 Micromonas commoda HOM05D001237 ORTHO05D009110 3.8e-42 176.4 351 34.5
Lju2073A0T61 Lonicera japonica HOM05D001237 ORTHO05D009110 1.5e-41 174.5 112 75.9
Sopen09g023280 Solanum pennellii HOM05D001237 ORTHO05D009110 9.8e-38 161.8 98 76.5
Gohir.D08G172350 Gossypium hirsutum HOM05D001237 ORTHO05D009110 1.3e-29 134.8 79 75.9
SalBow1G6490 Salvia bowleyana HOM05D001237 ORTHO05D009110 2.3e-26 124.0 107 58.9
FAN04G3094 Fragaria x ananassa HOM05D001237 ORTHO05D009110 5.0e-26 122.9 129 55.8
PRCOL_00006184 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 5.0e-26 122.9 282 30.5
MCO12G167 Micromonas commoda HOM05D001237 ORTHO05D009110 3.6e-24 116.7 275 28.7
SEGI_16157 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 3.7e-21 106.7 76 68.4
Gohir.D08G172400 Gossypium hirsutum HOM05D001237 ORTHO05D009110 1.2e-19 101.7 98 56.1
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 3.7e-13 80.1 298 28.2
CDE06G0123 Ceratophyllum demersum HOM05D005969 ORTHO05D007407 8.3e-13 79.0 353 26.6
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 1.1e-12 78.6 291 26.1
MD10G1047600 Malus domestica HOM05D005969 ORTHO05D007407 1.4e-12 78.2 315 27.6
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 2.4e-12 77.4 340 25.9
Cfa001877 Carpinus fangiana HOM05D005969 ORTHO05D007407 4.1e-12 76.6 296 27.0
Nn6g31679 Nelumbo nucifera HOM05D005969 ORTHO05D007407 4.1e-12 76.6 294 26.5
ATR0807G102 Amborella trichopoda HOM05D005969 ORTHO05D007407 5.4e-12 76.3 294 26.5
THA.LOC104814755 Tarenaya hassleriana HOM05D005969 ORTHO05D007407 5.4e-12 76.3 301 28.2
arahy.Tifrunner.gnm1.ann1.M9PPGY Arachis hypogaea HOM05D005969 ORTHO05D007407 7.1e-12 75.9 323 26.0
Nitab4.5_0008962g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 7.1e-12 75.9 298 27.5
Nitab4.5_0000886g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 1.2e-11 75.1 298 27.5
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 1.6e-11 74.7 294 27.2
Gorai.009G123400 Gossypium raimondii HOM05D005969 ORTHO05D007407 1.6e-11 74.7 294 27.2
arahy.Tifrunner.gnm1.ann1.WI8D6W Arachis hypogaea HOM05D005969 ORTHO05D007407 2.1e-11 74.3 323 26.0
Sp5g28020 Schrenkiella parvula HOM05D005969 ORTHO05D007407 2.1e-11 74.3 322 28.3
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 2.1e-11 74.3 299 26.8
Thhalv10018762m.g Eutrema salsugineum HOM05D005969 ORTHO05D007407 2.7e-11 73.9 302 27.5
A07p39070 Brassica napus HOM05D005969 ORTHO05D007407 3.5e-11 73.6 302 26.5
C06p47280 Brassica napus HOM05D005969 ORTHO05D007407 3.5e-11 73.6 302 26.5
BolC6t39767H Brassica oleracea HOM05D005969 ORTHO05D007407 3.5e-11 73.6 302 26.5
BraA07t31457Z Brassica rapa HOM05D005969 ORTHO05D007407 3.5e-11 73.6 302 26.5
HanXRQChr04g0099681 Helianthus annuus HOM05D005969 ORTHO05D007407 3.5e-11 73.6 326 27.0
Lalb_Chr01g0012061 Lupinus albus HOM05D005969 ORTHO05D007407 3.5e-11 73.6 295 27.1
Phvul.010G161700 Phaseolus vulgaris HOM05D005969 ORTHO05D007407 3.5e-11 73.6 297 26.9
TWI12G1191 Tripterygium wilfordii HOM05D005969 ORTHO05D007407 4.6e-11 73.2 360 25.6
PGR102G2845 Punica granatum HOM05D005969 ORTHO05D007407 6.0e-11 72.8 281 27.4
Thecc.06G042200 Theobroma cacao HOM05D005969 ORTHO05D007407 7.8e-11 72.4 293 27.3
Ciclev10025812m.g Citrus clementina HOM05D005969 ORTHO05D007407 1.0e-10 72.0 298 26.8
Haze_16671 Corylus avellana HOM05D005969 ORTHO05D007407 1.0e-10 72.0 296 26.4
Eucgr.F03965 Eucalyptus grandis HOM05D005969 ORTHO05D007407 1.0e-10 72.0 300 27.3
Dinv23280 Davidia involucrata HOM05D005969 ORTHO05D007407 1.3e-10 71.6 294 26.5
Lj3g0024544 Lotus japonicus HOM05D005969 ORTHO05D007407 1.3e-10 71.6 298 27.2
Potri.001G044000 Populus trichocarpa HOM05D005969 ORTHO05D007407 1.3e-10 71.6 298 26.5
AT1G73060 Arabidopsis thaliana HOM05D005969 ORTHO05D007407 1.7e-10 71.2 302 27.8
Carub.0002s1982 Capsella rubella HOM05D005969 ORTHO05D007407 1.7e-10 71.2 324 27.2
Duzib235G1247 Durio zibethinus HOM05D005969 ORTHO05D007407 1.7e-10 71.2 372 24.7
Migut.I00689 Erythranthe guttata HOM05D005969 ORTHO05D007407 1.7e-10 71.2 353 25.8
Glyma.08G219200 Glycine max HOM05D005969 ORTHO05D007407 1.7e-10 71.2 295 26.8
vmacro14221 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 1.7e-10 71.2 45 82.2
AL2G32810 Arabidopsis lyrata HOM05D005969 ORTHO05D007407 2.3e-10 70.9 300 26.7
Gohir.A05G118900 Gossypium hirsutum HOM05D005969 ORTHO05D007407 2.3e-10 70.9 294 26.9
VMungo0331G0028 Vigna mungo HOM05D005969 ORTHO05D007407 2.3e-10 70.9 295 26.4
Hma1.2p1_0109F.1_g052610 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 3.0e-10 70.5 300 25.7
CiPaw.01G255000 Carya illinoinensis HOM05D005969 ORTHO05D007407 3.9e-10 70.1 301 27.2
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 3.9e-10 70.1 293 26.6
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 3.9e-10 70.1 294 27.2
GSVIVG01015969001 Vitis vinifera HOM05D005969 ORTHO05D007407 3.9e-10 70.1 311 26.0
MELO3C023469.2 Cucumis melo HOM05D005969 ORTHO05D007407 5.1e-10 69.7 298 26.5
FvH4_6g28580 Fragaria vesca HOM05D005969 ORTHO05D007407 5.1e-10 69.7 301 25.9
PSO675G4447 Papaver somniferum HOM05D005969 ORTHO05D007407 5.1e-10 69.7 312 25.6
Actinidia18250 Actinidia chinensis HOM05D005969 ORTHO05D007407 6.6e-10 69.3 305 28.5
FAN05G1215 Fragaria x ananassa HOM05D005969 ORTHO05D007407 6.6e-10 69.3 296 26.4
FAN02G2588 Fragaria x ananassa HOM05D005969 ORTHO05D007407 8.6e-10 68.9 301 25.9
Mapoly0001s0169 Marchantia polymorpha HOM05D005969 ORTHO05D007407 8.6e-10 68.9 297 26.3
Sabra01G0030300 Salix brachista HOM05D005969 ORTHO05D007407 8.6e-10 68.9 298 26.2
PSO541G5031 Papaver somniferum HOM05D005969 ORTHO05D007407 1.1e-09 68.6 355 24.5
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 1.1e-09 68.6 297 27.9
RcHm_v2.0_Chr2g0132911 Rosa chinensis HOM05D005969 ORTHO05D007407 1.9e-09 67.8 313 25.2
Atru.chr10.2417 Acer truncatum HOM05D005969 ORTHO05D007407 2.5e-09 67.4 321 25.9
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 2.5e-09 67.4 292 26.7
ECA247G4019 Erigeron canadensis HOM05D005969 ORTHO05D007407 3.3e-09 67.0 292 26.4
AUR62027000 Chenopodium quinoa HOM05D005969 ORTHO05D007407 4.3e-09 66.6 313 24.9
Lsat_1_v5_gn_1_31041 Lactuca sativa HOM05D005969 ORTHO05D007407 5.6e-09 66.2 321 25.9
Rhsim08G0203900 Rhododendron simsii HOM05D005969 ORTHO05D007407 5.6e-09 66.2 292 25.7
Cc04_g05150 Coffea canephora HOM05D005969 ORTHO05D007407 7.3e-09 65.9 296 25.3
Psat7g262880 Pisum sativum HOM05D005969 ORTHO05D007407 7.3e-09 65.9 297 26.9
CANSAT56G2142 Cannabis sativa HOM05D005969 ORTHO05D007407 9.5e-09 65.5 312 26.3
Solyc06g068480.3 Solanum lycopersicum HOM05D005969 ORTHO05D007407 9.5e-09 65.5 294 26.2
Sopen06g025730 Solanum pennellii HOM05D005969 ORTHO05D007407 9.5e-09 65.5 361 24.9
HPP92_025491 Vanilla planifolia HOM05D005969 ORTHO05D007407 9.5e-09 65.5 299 25.1
AUR62030840 Chenopodium quinoa HOM05D005969 ORTHO05D007407 1.6e-08 64.7 295 26.1
PGSC0003DMG402028489 Solanum tuberosum HOM05D005969 ORTHO05D007407 1.6e-08 64.7 294 26.2
CSS0032429 Camellia sinensis var. sinensis HOM05D005969 ORTHO05D007407 2.8e-08 63.9 295 26.4
Haze_08097 Corylus avellana HOM05D001237 ORTHO05D009110 5.2e-07 59.7 88 38.6
MBI07_g40651_MAGBIO Magnolia biondii HOM05D001237 ORTHO05D009110 9.9e-06 55.5 67 44.8


User provided reference genes

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