Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22837 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 1.7e-104 382.9 219 100.0
vmacro01600 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 2.1e-78 296.2 175 100.0
Rhsim11G0103200 Rhododendron simsii HOM05D003268 ORTHO05D003719 1.2e-65 253.8 180 83.9
Actinidia17741 Actinidia chinensis HOM05D003268 ORTHO05D003719 3.6e-30 136.0 177 50.3
Dinv30944 Davidia involucrata HOM05D003268 ORTHO05D003719 2.6e-28 129.8 175 48.6
Actinidia11688 Actinidia chinensis HOM05D003268 ORTHO05D003719 9.7e-28 127.9 190 48.9
CSS0047817 Camellia sinensis var. sinensis HOM05D003268 ORTHO05D003719 3.2e-23 112.8 185 44.3
Lj5P319T26 Lonicera japonica HOM05D003268 ORTHO05D003719 3.6e-22 109.4 182 41.8
Cc02_g35810 Coffea canephora HOM05D003268 ORTHO05D003719 4.0e-21 105.9 205 39.0
Nitab4.5_0005904g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 1.4e-18 97.4 193 33.7
PGSC0003DMG400044126 Solanum tuberosum HOM05D003268 ORTHO05D003719 1.2e-17 94.4 197 33.0
Nitab4.5_0002485g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 2.7e-17 93.2 192 33.3
Hma1.2p1_0759F.1_g213940 Hydrangea macrophylla HOM05D003268 ORTHO05D003719 4.5e-17 92.4 195 35.4
SalBow4G1159 Salvia bowleyana HOM05D003268 ORTHO05D003719 4.5e-17 92.4 227 34.8
TAR636G0250 Trochodendron aralioides HOM05D003268 ORTHO05D003719 7.7e-17 91.7 193 34.2
Dinv24510 Davidia involucrata HOM05D003268 ORTHO05D003719 3.8e-16 89.4 159 41.5
Oeu023377.1 Olea europaea HOM05D003268 ORTHO05D003719 5.0e-16 89.0 140 44.3
Solyc01g101160.2 Solanum lycopersicum HOM05D003268 ORTHO05D003719 8.5e-16 88.2 197 32.0
Sopen01g044640 Solanum pennellii HOM05D003268 ORTHO05D003719 8.5e-16 88.2 197 32.0
Oeu023379.1 Olea europaea HOM05D003268 ORTHO05D003719 1.5e-15 87.4 140 43.6
MSTRG.16427 Avicennia marina HOM05D003268 ORTHO05D003719 3.2e-15 86.3 228 31.1
CAN.G1248.20 Capsicum annuum HOM05D003268 ORTHO05D003719 5.5e-15 85.5 186 32.3
Oeu016542.1 Olea europaea HOM05D003268 ORTHO05D003719 3.6e-14 82.8 139 41.0
SGA_v2.0_scaffold22G09705 Striga asiatica HOM05D003268 ORTHO05D003719 6.1e-14 82.0 202 32.7
CiPaw.07G035600 Carya illinoinensis HOM05D003268 ORTHO05D003719 2.3e-13 80.1 164 34.8
CsaV3_1G038030 Cucumis sativus L. HOM05D003268 ORTHO05D003719 3.0e-13 79.7 151 37.1
TWI56G0501 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 3.0e-13 79.7 130 40.0
MELO3C015242.2 Cucumis melo HOM05D003268 ORTHO05D003719 4.0e-13 79.3 133 39.1
Migut.N00971 Erythranthe guttata HOM05D003268 ORTHO05D003719 4.4e-12 75.9 197 29.9
ClCG03G017870 Citrullus lanatus HOM05D003268 ORTHO05D003719 5.7e-12 75.5 167 31.1
TAR633G0292 Trochodendron aralioides HOM05D003268 ORTHO05D003719 9.8e-12 74.7 194 32.0
Sed0007403 Sechium edule HOM05D003268 ORTHO05D003719 2.2e-11 73.6 157 31.8
Peaxi162Scf00357g00013 Petunia axillaris HOM05D003268 ORTHO05D003719 2.8e-11 73.2 147 37.4
Haze_00767 Corylus avellana HOM05D003268 ORTHO05D003719 1.8e-10 70.5 103 40.8
THA.LOC104816841 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 1.8e-10 70.5 139 38.1
COL.COLO4_34517 Corchorus olitorius HOM05D003268 ORTHO05D003719 3.1e-10 69.7 157 33.8
Manes.08G107700 Manihot esculenta HOM05D003268 ORTHO05D003719 3.1e-10 69.7 111 39.6
Duzib212G0032 Durio zibethinus HOM05D003268 ORTHO05D003719 5.4e-10 68.9 126 37.3
unitig_8.g4507 Utricularia gibba HOM05D003268 ORTHO05D003719 5.4e-10 68.9 127 37.0
Thecc.04G313000 Theobroma cacao HOM05D003268 ORTHO05D003719 9.2e-10 68.2 152 36.2
Sc16g0009390 Simmondsia chinensis HOM05D003268 ORTHO05D003719 1.2e-09 67.8 117 41.0
Duzib128G0788 Durio zibethinus HOM05D003268 ORTHO05D003719 2.0e-09 67.0 153 32.0
RcHm_v2.0_Chr3g0458411 Rosa chinensis HOM05D003268 ORTHO05D003719 2.0e-09 67.0 82 54.9
COL.COLO4_05489 Corchorus olitorius HOM05D003268 ORTHO05D003719 2.7e-09 66.6 107 37.4
ECA240G0886 Erigeron canadensis HOM05D003268 ORTHO05D003719 2.7e-09 66.6 177 32.2
QL06p014213 Quercus lobata HOM05D003268 ORTHO05D003719 2.7e-09 66.6 141 34.8
AL1G20040 Arabidopsis lyrata HOM05D003268 ORTHO05D003719 4.5e-09 65.9 106 39.6
TAR362G1252 Trochodendron aralioides HOM05D003268 ORTHO05D003719 4.5e-09 65.9 193 31.1
Gohir.D02G064200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.0e-08 64.7 139 34.5
Gorai.005G072500 Gossypium raimondii HOM05D003268 ORTHO05D003719 1.0e-08 64.7 139 34.5
Potri.010G002200 Populus trichocarpa HOM05D003268 ORTHO05D003719 1.3e-08 64.3 108 38.0
CANSAT54G2527 Cannabis sativa HOM05D003268 ORTHO05D003719 1.7e-08 63.9 145 35.2
Haze_03993 Corylus avellana HOM05D003268 ORTHO05D003719 1.7e-08 63.9 110 37.3
FvH4_6g08440 Fragaria vesca HOM05D003268 ORTHO05D003719 1.7e-08 63.9 138 41.3
FAN14G0797 Fragaria x ananassa HOM05D003268 ORTHO05D003719 1.7e-08 63.9 138 41.3
THA.LOC104821812 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 1.7e-08 63.9 75 49.3
Gohir.A02G058400 Gossypium hirsutum HOM05D003268 ORTHO05D003719 2.3e-08 63.5 139 33.8
THA.LOC104820490 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 2.3e-08 63.5 164 33.5
Cpa.g.sc53.77 Carica papaya HOM05D003268 ORTHO05D003719 2.9e-08 63.2 138 34.8
DCAR_001893 Daucus carota HOM05D003268 ORTHO05D003719 2.9e-08 63.2 198 30.8
Cpa.g.sc48.222 Carica papaya HOM05D003268 ORTHO05D003719 3.8e-08 62.8 134 34.3
PGR031G0843 Punica granatum HOM05D003268 ORTHO05D003719 5.0e-08 62.4 189 32.3
Sabra10G0001700 Salix brachista HOM05D003268 ORTHO05D003719 5.0e-08 62.4 108 37.0
Glyma.17G041900 Glycine max HOM05D003268 ORTHO05D003719 6.6e-08 62.0 116 36.2
Manes.11G020800 Manihot esculenta HOM05D003268 ORTHO05D003719 8.6e-08 61.6 135 33.3
Thecc.05G329300 Theobroma cacao HOM05D003268 ORTHO05D003719 8.6e-08 61.6 120 31.7
Aa31LG1G5560 Aethionema arabicum HOM05D003268 ORTHO05D003719 1.5e-07 60.8 123 36.6
Gohir.A13G177600 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.5e-07 60.8 111 36.0
MBI19_g47476_MAGBIO Magnolia biondii HOM05D003268 ORTHO05D003719 1.5e-07 60.8 185 28.6
FAN02G3445 Fragaria x ananassa HOM05D003268 ORTHO05D003719 1.9e-07 60.5 82 51.2
Sed0001415 Sechium edule HOM05D003268 ORTHO05D003719 2.5e-07 60.1 111 41.4
TWI09G0361 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 2.5e-07 60.1 111 43.2
Cfa015729 Carpinus fangiana HOM05D003268 ORTHO05D003719 3.3e-07 59.7 103 43.7
Glyma.13G118100 Glycine max HOM05D003268 ORTHO05D003719 3.3e-07 59.7 116 35.3
VMungo0720G1780 Vigna mungo HOM05D003268 ORTHO05D003719 5.6e-07 58.9 152 33.6
Phvul.007G204700 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 7.3e-07 58.5 140 32.9
Aqoxy2G02513 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 2.1e-06 57.0 117 34.2
Glyma.10G143800 Glycine max HOM05D003268 ORTHO05D003719 2.8e-06 56.6 123 35.0
Glyma.20G092502 Glycine max HOM05D003268 ORTHO05D003719 2.8e-06 56.6 104 37.5
HPP92_012769 Vanilla planifolia HOM05D003268 ORTHO05D003719 2.8e-06 56.6 144 34.0
Carub.0001s0886 Capsella rubella HOM05D003268 ORTHO05D003719 3.6e-06 56.2 107 35.5
Gohir.D13G184200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 4.7e-06 55.8 111 34.2
Gorai.013G209800 Gossypium raimondii HOM05D003268 ORTHO05D003719 4.7e-06 55.8 111 34.2
Ciclev10013870m.g Citrus clementina HOM05D003268 ORTHO05D003719 6.1e-06 55.5 103 35.0
PSO170G4270 Papaver somniferum HOM05D003268 ORTHO05D003719 6.1e-06 55.5 108 36.1
PSO210G7784 Papaver somniferum HOM05D003268 ORTHO05D003719 6.1e-06 55.5 113 36.3
PSO761G0464 Papaver somniferum HOM05D003268 ORTHO05D003719 6.1e-06 55.5 113 36.3
QL03p010269 Quercus lobata HOM05D003268 ORTHO05D003719 6.1e-06 55.5 133 31.6
QL03p010503 Quercus lobata HOM05D003268 ORTHO05D003719 6.1e-06 55.5 133 31.6
C08p49440 Brassica napus HOM05D003268 ORTHO05D003719 8.0e-06 55.1 81 42.0
Lalb_Chr13g0299031 Lupinus albus HOM05D003268 ORTHO05D003719 8.0e-06 55.1 113 35.4
Medtr1g484850 Medicago truncatula HOM05D003268 ORTHO05D003719 8.0e-06 55.1 93 35.5
unitig_578.g15944 Utricularia gibba HOM05D003268 ORTHO05D003719 8.0e-06 55.1 76 48.7


User provided reference genes

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