Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22822 Vaccinium macrocarpon HOM05D005430 ORTHO05D007814 4.9e-102 374.4 180 100.0
CSS0041852 Camellia sinensis var. sinensis HOM05D005430 ORTHO05D007814 3.3e-42 175.6 115 72.2
Rhsim06G0013100 Rhododendron simsii HOM05D005430 ORTHO05D007814 3.1e-40 169.1 89 86.5
Actinidia25081 Actinidia chinensis HOM05D005430 ORTHO05D007814 7.2e-37 157.9 110 73.6
Sabra03G0128400 Salix brachista HOM05D005430 ORTHO05D007814 2.7e-36 156.0 140 58.6
Potri.003G175200 Populus trichocarpa HOM05D005430 ORTHO05D007814 6.8e-35 151.4 116 64.7
Duzib212G0862 Durio zibethinus HOM05D005430 ORTHO05D007814 9.8e-34 147.5 109 64.2
Prupe.1G058400 Prunus persica HOM05D005430 ORTHO05D007814 6.3e-33 144.8 116 61.2
GSVIVG01029041001 Vitis vinifera HOM05D005430 ORTHO05D007814 8.3e-33 144.4 115 63.5
Thecc.04G212700 Theobroma cacao HOM05D005430 ORTHO05D007814 2.4e-32 142.9 109 62.4
MD16G1234100 Malus domestica HOM05D005430 ORTHO05D007814 5.4e-32 141.7 116 59.5
Potri.001G053100 Populus trichocarpa HOM05D005430 ORTHO05D007814 9.1e-32 141.0 116 60.3
COL.COLO4_34091 Corchorus olitorius HOM05D005430 ORTHO05D007814 2.7e-31 139.4 96 67.7
Ciclev10006174m.g Citrus clementina HOM05D005430 ORTHO05D007814 3.5e-31 139.0 115 61.7
Oeu041168.1 Olea europaea HOM05D005430 ORTHO05D007814 3.5e-31 139.0 138 54.3
RcHm_v2.0_Chr4g0396841 Rosa chinensis HOM05D005430 ORTHO05D007814 4.5e-31 138.7 109 60.6
Nitab4.5_0008614g0010 Nicotiana tabacum HOM05D005430 ORTHO05D007814 2.3e-30 136.3 114 60.5
Cpa.g.sc59.85 Carica papaya HOM05D005430 ORTHO05D007814 2.9e-30 136.0 111 60.4
MD13G1228600 Malus domestica HOM05D005430 ORTHO05D007814 2.9e-30 136.0 116 59.5
Eucgr.H00103 Eucalyptus grandis HOM05D005430 ORTHO05D007814 3.8e-30 135.6 118 59.3
Manes.03G153100 Manihot esculenta HOM05D005430 ORTHO05D007814 3.8e-30 135.6 108 59.3
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 3.8e-30 135.6 106 58.5
Gohir.A10G120900 Gossypium hirsutum HOM05D005430 ORTHO05D007814 5.0e-30 135.2 114 61.4
Gohir.D10G145400 Gossypium hirsutum HOM05D005430 ORTHO05D007814 5.0e-30 135.2 114 61.4
Gorai.011G162600 Gossypium raimondii HOM05D005430 ORTHO05D007814 5.0e-30 135.2 114 61.4
FAN17G1087 Fragaria x ananassa HOM05D005430 ORTHO05D007814 6.5e-30 134.8 114 55.3
Dinv38286 Davidia involucrata HOM05D005430 ORTHO05D007814 1.1e-29 134.0 93 66.7
FvH4_4g05670 Fragaria vesca HOM05D005430 ORTHO05D007814 1.9e-29 133.3 114 54.4
FAN12G0934 Fragaria x ananassa HOM05D005430 ORTHO05D007814 2.5e-29 132.9 114 54.4
Hma1.2p1_0903F.1_g235070 Hydrangea macrophylla HOM05D005430 ORTHO05D007814 2.5e-29 132.9 114 55.3
AL3G39310 Arabidopsis lyrata HOM05D005430 ORTHO05D007814 2.1e-28 129.8 112 57.1
FAN07G2372 Fragaria x ananassa HOM05D005430 ORTHO05D007814 3.6e-28 129.0 97 60.8
Atru.chr4.1803 Acer truncatum HOM05D005430 ORTHO05D007814 8.0e-28 127.9 122 58.2
AT3G24060 Arabidopsis thaliana HOM05D005430 ORTHO05D007814 8.0e-28 127.9 112 56.2
Sp3g21900 Schrenkiella parvula HOM05D005430 ORTHO05D007814 8.0e-28 127.9 113 58.4
FAN22G2342 Fragaria x ananassa HOM05D005430 ORTHO05D007814 1.0e-27 127.5 97 59.8
QL06p023021 Quercus lobata HOM05D005430 ORTHO05D007814 1.8e-27 126.7 93 61.3
QL12p006673 Quercus lobata HOM05D005430 ORTHO05D007814 5.2e-27 125.2 114 52.6
Oeu033089.1 Olea europaea HOM05D005430 ORTHO05D007814 6.8e-27 124.8 108 56.5
QL11p023894 Quercus lobata HOM05D005430 ORTHO05D007814 6.8e-27 124.8 93 60.2
Haze_11548 Corylus avellana HOM05D005430 ORTHO05D007814 8.8e-27 124.4 116 52.6
Cfa014874 Carpinus fangiana HOM05D005430 ORTHO05D007814 1.2e-26 124.0 118 52.5
Sed0027066 Sechium edule HOM05D005430 ORTHO05D007814 1.2e-26 124.0 107 56.1
PGSC0003DMG400016877 Solanum tuberosum HOM05D005430 ORTHO05D007814 1.2e-26 124.0 147 49.0
AL8G20530 Arabidopsis lyrata HOM05D005430 ORTHO05D007814 1.5e-26 123.6 94 60.6
CANSAT78G1772 Cannabis sativa HOM05D005430 ORTHO05D007814 1.5e-26 123.6 111 51.4
CANSAT78G2053 Cannabis sativa HOM05D005430 ORTHO05D007814 1.5e-26 123.6 111 51.4
Solyc12g098110.1 Solanum lycopersicum HOM05D005430 ORTHO05D007814 1.5e-26 123.6 148 48.0
MELO3C023093.2 Cucumis melo HOM05D005430 ORTHO05D007814 2.0e-26 123.2 111 55.0
CAN.G706.30 Capsicum annuum HOM05D005430 ORTHO05D007814 2.6e-26 122.9 138 48.6
Thhalv10003022m.g Eutrema salsugineum HOM05D005430 ORTHO05D007814 2.6e-26 122.9 108 56.5
QL05p063717 Quercus lobata HOM05D005430 ORTHO05D007814 3.4e-26 122.5 82 65.9
QL05p063758 Quercus lobata HOM05D005430 ORTHO05D007814 3.4e-26 122.5 82 65.9
CARHR100160 Cardamine hirsuta HOM05D005430 ORTHO05D007814 4.4e-26 122.1 107 56.1
HanXRQChr07g0185851 Helianthus annuus HOM05D005430 ORTHO05D007814 4.4e-26 122.1 120 54.2
Manes.15G049100 Manihot esculenta HOM05D005430 ORTHO05D007814 4.4e-26 122.1 115 56.5
CiPaw.01G204600 Carya illinoinensis HOM05D005430 ORTHO05D007814 7.5e-26 121.3 82 65.9
Sopen12g032930 Solanum pennellii HOM05D005430 ORTHO05D007814 7.5e-26 121.3 148 48.0
CAN.G1745.2 Capsicum annuum HOM05D005430 ORTHO05D007814 9.8e-26 120.9 140 46.4
Sed0023963 Sechium edule HOM05D005430 ORTHO05D007814 1.3e-25 120.6 110 53.6
THA.LOC104821619 Tarenaya hassleriana HOM05D005430 ORTHO05D007814 1.3e-25 120.6 105 55.2
A01p31010 Brassica napus HOM05D005430 ORTHO05D007814 1.7e-25 120.2 113 54.9
BraA01t03227Z Brassica rapa HOM05D005430 ORTHO05D007814 1.7e-25 120.2 113 54.9
Carub.0003s2446 Capsella rubella HOM05D005430 ORTHO05D007814 1.7e-25 120.2 79 69.6
BcaB04g20397 Brassica carinata HOM05D005430 ORTHO05D007814 2.2e-25 119.8 113 54.9
Lsat_1_v5_gn_6_62741 Lactuca sativa HOM05D005430 ORTHO05D007814 2.8e-25 119.4 93 58.1
Sed0021677 Sechium edule HOM05D005430 ORTHO05D007814 2.8e-25 119.4 114 52.6
C01p39510 Brassica napus HOM05D005430 ORTHO05D007814 4.9e-25 118.6 113 54.0
BolC1t03901H Brassica oleracea HOM05D005430 ORTHO05D007814 4.9e-25 118.6 113 54.0
Lalb_Chr15g0088741 Lupinus albus HOM05D005430 ORTHO05D007814 6.3e-25 118.2 117 52.1
CsaV3_2G012000 Cucumis sativus L. HOM05D005430 ORTHO05D007814 8.3e-25 117.9 82 63.4
Sed0020493 Sechium edule HOM05D005430 ORTHO05D007814 1.1e-24 117.5 114 52.6
VMungo0540G1768 Vigna mungo HOM05D005430 ORTHO05D007814 1.4e-24 117.1 113 51.3
TWI73G0050 Tripterygium wilfordii HOM05D005430 ORTHO05D007814 1.8e-24 116.7 118 55.9
MELO3C006342.2 Cucumis melo HOM05D005430 ORTHO05D007814 2.4e-24 116.3 115 52.2
Sc13g0002820 Simmondsia chinensis HOM05D005430 ORTHO05D007814 2.4e-24 116.3 133 45.9
Solyc09g091360.1 Solanum lycopersicum HOM05D005430 ORTHO05D007814 3.1e-24 115.9 136 45.6
Glyma.15G129600 Glycine max HOM05D005430 ORTHO05D007814 4.1e-24 115.5 112 50.0
TPR.G26356 Trifolium pratense HOM05D005430 ORTHO05D007814 4.1e-24 115.5 113 52.2
arahy.Tifrunner.gnm1.ann1.D09HZI Arachis hypogaea HOM05D005430 ORTHO05D007814 5.4e-24 115.2 109 53.2
Migut.N00331 Erythranthe guttata HOM05D005430 ORTHO05D007814 7.0e-24 114.8 113 52.2
Medtr2g030100 Medicago truncatula HOM05D005430 ORTHO05D007814 9.2e-24 114.4 113 51.3
CsaV3_3G011340 Cucumis sativus L. HOM05D005430 ORTHO05D007814 1.6e-23 113.6 89 61.8
Glyma.09G023500 Glycine max HOM05D005430 ORTHO05D007814 2.0e-23 113.2 111 50.5
Medtr2g030080 Medicago truncatula HOM05D005430 ORTHO05D007814 4.5e-23 112.1 111 50.5
Phvul.006G128700 Phaseolus vulgaris HOM05D005430 ORTHO05D007814 7.8e-23 111.3 113 48.7
Psat1g167840 Pisum sativum HOM05D005430 ORTHO05D007814 1.0e-22 110.9 109 49.5
TPR.G26323 Trifolium pratense HOM05D005430 ORTHO05D007814 1.0e-22 110.9 117 49.6
ClCG05G003630 Citrullus lanatus HOM05D005430 ORTHO05D007814 3.8e-22 109.0 84 61.9
EL10Ac3g06777 Beta vulgaris HOM05D005430 ORTHO05D007814 4.3e-21 105.5 84 59.5
SalBow3G0850 Salvia bowleyana HOM05D005430 ORTHO05D007814 7.3e-21 104.8 80 58.8
Nitab4.5_0003185g0070 Nicotiana tabacum HOM05D005430 ORTHO05D007814 1.2e-20 104.0 88 60.2
HanXRQChr02g0059521 Helianthus annuus HOM05D005430 ORTHO05D007814 2.1e-20 103.2 120 45.0
SGA_v2.0_scaffold2G00855 Striga asiatica HOM05D005430 ORTHO05D007814 1.4e-19 100.5 86 57.0
SHI00018 Sapria himalayana HOM05D005430 ORTHO05D007814 4.1e-16 89.0 108 41.7
Lj4g0012468 Lotus japonicus HOM05D000256 ORTHO05D000119 1.2e-10 70.9 70 42.9
Cpa.g.sc59.81 Carica papaya HOM05D005430 ORTHO05D000119 9.8e-10 67.8 78 39.7
SalBow2G2503 Salvia bowleyana HOM05D005430 ORTHO05D000119 2.9e-09 66.2 103 35.0
Solyc11g071900.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 8.3e-09 64.7 123 30.1
Duzib212G0436 Durio zibethinus HOM05D005430 ORTHO05D007814 1.9e-08 63.5 113 30.1
Migut.G00603 Erythranthe guttata HOM05D005430 ORTHO05D007814 1.9e-08 63.5 88 36.4
Migut.G00680 Erythranthe guttata HOM05D005430 ORTHO05D000119 2.4e-08 63.2 101 35.6
Migut.G00604 Erythranthe guttata HOM05D005430 ORTHO05D007814 3.2e-08 62.8 78 32.1
Nitab4.5_0004762g0080 Nicotiana tabacum HOM05D000256 ORTHO05D000119 3.2e-08 62.8 82 35.4
unitig_699.g19174 Utricularia gibba HOM05D000256 ORTHO05D000119 3.2e-08 62.8 77 39.0
Phvul.011G169266 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 5.4e-08 62.0 72 37.5
Phvul.011G171900 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 7.0e-08 61.6 84 36.9
Sopen11g029570 Solanum pennellii HOM05D000256 ORTHO05D000119 7.0e-08 61.6 86 29.1
Thecc.04G213200 Theobroma cacao HOM05D005430 ORTHO05D007814 7.0e-08 61.6 81 33.3
TAR365G0031 Trochodendron aralioides HOM05D000256 ORTHO05D000119 9.2e-08 61.2 108 33.3
TPR.G22641 Trifolium pratense HOM05D000256 ORTHO05D000119 1.2e-07 60.8 76 34.2
Cpa.g.sc169.24 Carica papaya HOM05D000256 ORTHO05D000119 1.6e-07 60.5 94 30.9
Medtr8g094890 Medicago truncatula HOM05D000256 ORTHO05D000119 1.6e-07 60.5 73 34.2
Medtr8g094915 Medicago truncatula HOM05D000256 ORTHO05D000119 1.6e-07 60.5 73 34.2
TWI14G0081 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 1.6e-07 60.5 98 35.7
TAR362G1185 Trochodendron aralioides HOM05D000256 ORTHO05D000119 2.0e-07 60.1 105 31.4
FvH4_4g05620 Fragaria vesca HOM05D000256 ORTHO05D000119 2.7e-07 59.7 114 27.2
FAN12G3699 Fragaria x ananassa HOM05D000256 ORTHO05D000119 2.7e-07 59.7 114 27.2
Hma1.2p1_0691F.1_g204070 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 2.7e-07 59.7 63 34.9
MD10G1085700 Malus domestica HOM05D000256 ORTHO05D000119 2.7e-07 59.7 84 33.3
Carub.0002s1136 Capsella rubella HOM05D000256 ORTHO05D000119 3.5e-07 59.3 125 28.0
COL.COLO4_34097 Corchorus olitorius HOM05D005430 ORTHO05D007814 4.6e-07 58.9 110 30.0
Medtr8g094810 Medicago truncatula HOM05D000004 ORTHO05D000002 4.6e-07 58.9 68 32.4
SalBow2G0067 Salvia bowleyana HOM05D005430 ORTHO05D000119 4.6e-07 58.9 108 34.3
Cpa.g.sc12.57 Carica papaya HOM05D005430 ORTHO05D007814 6.0e-07 58.5 78 34.6
Lalb_Chr11g0072401 Lupinus albus HOM05D000256 ORTHO05D000119 6.0e-07 58.5 111 30.6
Manes.09G044300 Manihot esculenta HOM05D000256 ORTHO05D000119 6.0e-07 58.5 78 33.3
Gorai.006G055200 Gossypium raimondii HOM05D005430 ORTHO05D007814 1.0e-06 57.8 83 33.7
Lalb_Chr18g0044371 Lupinus albus HOM05D000256 ORTHO05D000119 1.0e-06 57.8 76 36.8
Oeu028650.1 Olea europaea HOM05D000256 ORTHO05D000119 1.0e-06 57.8 64 39.1
QL01p019403 Quercus lobata HOM05D000256 ORTHO05D000119 1.0e-06 57.8 60 36.7
TPR.G37398 Trifolium pratense HOM05D000256 ORTHO05D000119 1.0e-06 57.8 58 37.9
CSS0050460 Camellia sinensis var. sinensis HOM05D000256 ORTHO05D000119 1.3e-06 57.4 92 30.4
CARHR004020 Cardamine hirsuta HOM05D000256 ORTHO05D000119 1.3e-06 57.4 73 34.2
PGR044G0923 Punica granatum HOM05D000256 ORTHO05D000119 1.7e-06 57.0 92 32.6
BolC8t46945H Brassica oleracea HOM05D000256 ORTHO05D000119 2.3e-06 56.6 79 29.1
Gohir.D09G053032 Gossypium hirsutum HOM05D005430 ORTHO05D007814 2.3e-06 56.6 83 33.7
Phvul.011G169288 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 2.3e-06 56.6 72 34.7
Migut.F01940 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.0e-06 56.2 108 30.6
Gohir.A09G053500 Gossypium hirsutum HOM05D005430 ORTHO05D000119 3.0e-06 56.2 104 29.8
Medtr8g094830 Medicago truncatula HOM05D000256 ORTHO05D000119 3.0e-06 56.2 60 36.7
TAR633G1870 Trochodendron aralioides HOM05D000256 ORTHO05D000119 3.0e-06 56.2 61 36.1
Migut.G00698 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.9e-06 55.8 55 41.8
Migut.H02432 Erythranthe guttata HOM05D005430 ORTHO05D000119 3.9e-06 55.8 69 33.3
Lalb_Chr22g0360131 Lupinus albus HOM05D000256 ORTHO05D000119 3.9e-06 55.8 115 29.6
MD05G1181700 Malus domestica HOM05D000256 ORTHO05D000119 3.9e-06 55.8 102 31.4
CiPaw.13G128600 Carya illinoinensis HOM05D000256 ORTHO05D000119 5.0e-06 55.5 77 35.1
Migut.G00700 Erythranthe guttata HOM05D000256 ORTHO05D000119 5.0e-06 55.5 57 36.8
Migut.J01121 Erythranthe guttata HOM05D000256 ORTHO05D000119 5.0e-06 55.5 60 38.3
Eucgr.B02182 Eucalyptus grandis HOM05D000256 ORTHO05D000119 5.0e-06 55.5 95 31.6
Eucgr.L01080 Eucalyptus grandis HOM05D000256 ORTHO05D000119 5.0e-06 55.5 95 31.6
TPR.G5085 Trifolium pratense HOM05D000256 ORTHO05D000119 5.0e-06 55.5 110 30.0
TWI14G1030 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 5.0e-06 55.5 88 35.2
Ciclev10006461m.g Citrus clementina HOM05D000256 ORTHO05D000119 6.6e-06 55.1 102 29.4
MELO3C027686.2 Cucumis melo HOM05D000256 ORTHO05D000119 6.6e-06 55.1 81 30.9
Gohir.D05G317450 Gossypium hirsutum HOM05D000256 ORTHO05D000119 6.6e-06 55.1 103 31.1
Sc18g0002440 Simmondsia chinensis HOM05D000256 ORTHO05D000119 6.6e-06 55.1 62 38.7
Thecc.01G232000 Theobroma cacao HOM05D000256 ORTHO05D000119 6.6e-06 55.1 95 35.8
TPR.G22372 Trifolium pratense HOM05D000256 ORTHO05D000119 6.6e-06 55.1 105 28.6
TAR362G0888 Trochodendron aralioides HOM05D000256 ORTHO05D000119 6.6e-06 55.1 75 36.0
BcaC07g36891 Brassica carinata HOM05D000256 ORTHO05D000119 8.6e-06 54.7 79 29.1
C08p01360 Brassica napus HOM05D000256 ORTHO05D000119 8.6e-06 54.7 79 29.1
Migut.F01649 Erythranthe guttata HOM05D000256 ORTHO05D000119 8.6e-06 54.7 103 28.2
Lalb_Chr07g0181531 Lupinus albus HOM05D000256 ORTHO05D000119 8.6e-06 54.7 70 32.9
Phvul.011G169244 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 8.6e-06 54.7 72 36.1


User provided reference genes

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