Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22821 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 0.0e+00 1599.7 826 100.0
vmacro00516 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 0.0e+00 1330.9 943 79.0
Rhsim09G0049200 Rhododendron simsii HOM05D006492 ORTHO05D008432 0.0e+00 1146.3 943 69.0
Actinidia25080 Actinidia chinensis HOM05D006492 ORTHO05D008432 3.4e-275 951.8 944 59.4
CSS0015325 Camellia sinensis var. sinensis HOM05D006492 ORTHO05D008432 3.0e-271 938.7 942 58.0
Dinv38285 Davidia involucrata HOM05D006492 ORTHO05D008432 2.3e-255 885.9 942 55.9
Haze_11549 Corylus avellana HOM05D006492 ORTHO05D008432 9.2e-212 741.1 942 48.2
Cfa014875 Carpinus fangiana HOM05D006492 ORTHO05D008432 5.0e-210 735.3 944 47.6
GSVIVG01029042001 Vitis vinifera HOM05D006492 ORTHO05D008432 7.5e-206 721.5 938 47.1
TAR365G0557 Trochodendron aralioides HOM05D006492 ORTHO05D008432 2.7e-203 713.0 949 46.8
CiPaw.01G204100 Carya illinoinensis HOM05D006492 ORTHO05D008432 1.0e-202 711.1 943 46.9
TAR365G0379 Trochodendron aralioides HOM05D006492 ORTHO05D008432 8.6e-202 708.0 949 46.5
QL05p063769 Quercus lobata HOM05D006492 ORTHO05D008432 9.5e-201 704.5 942 45.8
Lju414A5T31 Lonicera japonica HOM05D006492 ORTHO05D008432 1.8e-199 700.3 828 50.1
MD00G1101100 Malus domestica HOM05D006492 ORTHO05D008432 5.4e-196 688.7 951 45.1
Ciclev10004244m.g Citrus clementina HOM05D006492 ORTHO05D008432 1.5e-193 680.6 942 45.0
Potri.003G175300 Populus trichocarpa HOM05D006492 ORTHO05D008432 1.5e-193 680.6 940 44.6
Prupe.1G060300 Prunus persica HOM05D006492 ORTHO05D008432 1.2e-192 677.6 951 44.0
Cc03_g07180 Coffea canephora HOM05D006492 ORTHO05D008432 2.8e-192 676.4 947 44.0
Potri.001G053000 Populus trichocarpa HOM05D006492 ORTHO05D008432 1.4e-188 664.1 942 43.8
Duzib212G0418 Durio zibethinus HOM05D006492 ORTHO05D008432 2.1e-187 660.2 942 43.5
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 7.8e-187 658.3 937 44.0
DCAR_002278 Daucus carota HOM05D006492 ORTHO05D008432 2.3e-186 656.8 966 43.1
Migut.N00332 Erythranthe guttata HOM05D006492 ORTHO05D008432 5.1e-186 655.6 952 43.8
TWI09G1643 Tripterygium wilfordii HOM05D006492 ORTHO05D008432 8.6e-186 654.8 954 43.3
Nitab4.5_0012325g0010 Nicotiana tabacum HOM05D006492 ORTHO05D008432 2.5e-185 653.3 941 43.7
Thecc.04G212600 Theobroma cacao HOM05D006492 ORTHO05D008432 2.5e-185 653.3 938 43.5
RcHm_v2.0_Chr4g0396881 Rosa chinensis HOM05D006492 ORTHO05D008432 5.6e-185 652.1 951 44.3
Manes.15G049000 Manihot esculenta HOM05D006492 ORTHO05D008432 1.6e-184 650.6 938 43.4
Nitab4.5_0000493g0030 Nicotiana tabacum HOM05D006492 ORTHO05D008432 1.6e-184 650.6 941 43.7
Peaxi162Scf00047g01324 Petunia axillaris HOM05D006492 ORTHO05D008432 2.8e-184 649.8 943 43.1
Oeu051651.1 Olea europaea HOM05D006492 ORTHO05D008432 8.1e-184 648.3 773 48.6
Sopen09g034300 Solanum pennellii HOM05D006492 ORTHO05D008432 2.4e-183 646.7 942 43.1
FAN12G2087 Fragaria x ananassa HOM05D006492 ORTHO05D008432 2.9e-181 639.8 952 43.1
FAN17G1964 Fragaria x ananassa HOM05D006492 ORTHO05D008432 2.9e-181 639.8 935 43.2
FAN07G0933 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.9e-180 637.1 951 43.1
SGA_v2.0_scaffold2G00843 Striga asiatica HOM05D006492 ORTHO05D008432 5.4e-180 635.6 936 43.2
Gohir.D09G053008 Gossypium hirsutum HOM05D006492 ORTHO05D008432 1.2e-179 634.4 943 42.2
Gorai.006G055600 Gossypium raimondii HOM05D006492 ORTHO05D008432 2.1e-179 633.6 943 42.1
FAN22G2187 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.0e-178 631.3 951 42.8
MSTRG.24638 Avicennia marina HOM05D006492 ORTHO05D008432 4.3e-177 625.9 844 45.9
CAN.G1552.5 Capsicum annuum HOM05D006492 ORTHO05D008432 1.2e-176 624.4 940 41.7
HanXRQChr07g0185861 Helianthus annuus HOM05D006492 ORTHO05D008432 2.8e-176 623.2 920 43.3
Nn1g03104 Nelumbo nucifera HOM05D006492 ORTHO05D008432 4.4e-174 615.9 939 42.0
MBI10_g16832_MAGBIO Magnolia biondii HOM05D006492 ORTHO05D008432 7.6e-174 615.1 959 42.6
ECA233G5226 Erigeron canadensis HOM05D006492 ORTHO05D008432 6.4e-173 612.1 928 42.8
SalBow3G2597 Salvia bowleyana HOM05D006492 ORTHO05D008432 1.0e-170 604.7 942 42.3
Lsat_1_v5_gn_6_62680 Lactuca sativa HOM05D006492 ORTHO05D008432 1.9e-169 600.5 924 40.8
COL.COLO4_34090 Corchorus olitorius HOM05D006492 ORTHO05D008432 3.3e-169 599.7 943 41.3
CANSAT78G0108 Cannabis sativa HOM05D006492 ORTHO05D008432 2.1e-163 580.5 954 39.6
Eucgr.H00098 Eucalyptus grandis HOM05D006492 ORTHO05D008432 6.7e-162 575.5 945 39.4
Cpa.g.sc59.86 Carica papaya HOM05D006492 ORTHO05D008432 1.5e-161 574.3 855 42.6
Glyma.10G192800 Glycine max HOM05D006492 ORTHO05D008432 4.8e-160 569.3 941 39.1
arahy.Tifrunner.gnm1.ann1.TP3X9S Arachis hypogaea HOM05D006492 ORTHO05D008432 1.5e-158 564.3 940 38.3
AUR62035934 Chenopodium quinoa HOM05D006492 ORTHO05D008432 3.4e-158 563.1 947 38.8
EL10Ac3g06781 Beta vulgaris HOM05D006492 ORTHO05D008432 7.6e-158 562.0 944 38.7
Glyma.20G197700 Glycine max HOM05D006492 ORTHO05D008432 2.2e-157 560.5 940 38.5
Aqoxy2G03837 Aquilegia oxysepala HOM05D006492 ORTHO05D008432 1.1e-156 558.1 949 39.2
Hund24849 Selenicereus undatus HOM05D006492 ORTHO05D008432 9.3e-156 555.1 941 38.9
Ah.04g153340 Amaranthus hybridus HOM05D006492 ORTHO05D008432 1.2e-155 554.7 942 37.5
Phvul.007G134600 Phaseolus vulgaris HOM05D006492 ORTHO05D008432 1.6e-155 554.3 940 38.4
VMungo0720G0701 Vigna mungo HOM05D006492 ORTHO05D008432 6.0e-155 552.4 940 38.4
Lj5g0018955 Lotus japonicus HOM05D006492 ORTHO05D008432 1.1e-151 541.6 941 37.4
Sc14g0004710 Simmondsia chinensis HOM05D006492 ORTHO05D008432 9.0e-151 538.5 942 37.4
ClCG05G003620 Citrullus lanatus HOM05D006492 ORTHO05D008432 1.3e-149 534.6 941 36.8
unitig_899.g15531 Utricularia gibba HOM05D006492 ORTHO05D008432 1.3e-149 534.6 841 41.6
Lalb_Chr21g0312661 Lupinus albus HOM05D006492 ORTHO05D008432 1.9e-148 530.8 938 38.1
TPR.G13408 Trifolium pratense HOM05D006492 ORTHO05D008432 2.5e-148 530.4 956 36.8
Medtr1g090050 Medicago truncatula HOM05D006492 ORTHO05D008432 4.2e-148 529.6 954 36.4
Ca_10406_v3 Cicer arietinum L. HOM05D006492 ORTHO05D008432 4.6e-147 526.2 941 37.0
PGR142G2376 Punica granatum HOM05D006492 ORTHO05D008432 1.5e-145 521.2 943 38.3
Psat6g170280 Pisum sativum HOM05D006492 ORTHO05D008432 2.8e-144 516.9 956 36.1
CsaV3_3G011330 Cucumis sativus L. HOM05D006492 ORTHO05D008432 9.0e-143 511.9 862 37.8
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 1.6e-139 501.1 932 36.1
AL1G14360 Arabidopsis lyrata HOM05D006492 ORTHO05D008432 2.7e-139 500.4 936 35.7
PSO017G3024 Papaver somniferum HOM05D006492 ORTHO05D008432 2.3e-138 497.3 995 35.9
Thhalv10006668m.g Eutrema salsugineum HOM05D006492 ORTHO05D008432 2.5e-137 493.8 827 37.7
CARHR004030 Cardamine hirsuta HOM05D006492 ORTHO05D008432 9.7e-137 491.9 936 35.1
Carub.0001s0390 Capsella rubella HOM05D006492 ORTHO05D008432 4.8e-136 489.6 932 35.2
PSO063G2396 Papaver somniferum HOM05D006492 ORTHO05D008432 6.3e-136 489.2 987 35.7
AT1G04650 Arabidopsis thaliana HOM05D006492 ORTHO05D008432 1.8e-135 487.6 934 35.3
Sed0001454 Sechium edule HOM05D006492 ORTHO05D008432 1.8e-135 487.6 950 35.2
FvH4_4g05680 Fragaria vesca HOM05D006492 ORTHO05D008432 1.3e-133 481.5 643 45.1
BolC8t46943H Brassica oleracea HOM05D006492 ORTHO05D008432 2.9e-133 480.3 828 37.0
THA.LOC104816017 Tarenaya hassleriana HOM05D006492 ORTHO05D008432 5.0e-133 479.6 935 35.5
ATR0787G047 Amborella trichopoda HOM05D006492 ORTHO05D008432 1.4e-132 478.0 952 35.0
C08p01350 Brassica napus HOM05D006492 ORTHO05D008432 5.5e-132 476.1 828 36.7
CDE04G0311 Ceratophyllum demersum HOM05D006492 ORTHO05D008432 5.5e-132 476.1 828 36.6
Atru.chr4.1802 Acer truncatum HOM05D006492 ORTHO05D008432 9.4e-132 475.3 659 45.7
Solyc09g091370.4 Solanum lycopersicum HOM05D006492 ORTHO05D008432 7.9e-131 472.2 616 46.1
MELO3C006341.2 Cucumis melo HOM05D006492 ORTHO05D008432 1.4e-130 471.5 816 36.6
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 1.8e-130 471.1 938 35.2
BraA08t35581Z Brassica rapa HOM05D006492 ORTHO05D008432 1.8e-130 471.1 938 35.1
Aa31LG1G20220 Aethionema arabicum HOM05D006492 ORTHO05D008432 1.1e-127 461.8 944 33.6
A10p03080 Brassica napus HOM05D006492 ORTHO05D008432 2.0e-126 457.6 826 36.0
BcaC07g36892 Brassica carinata HOM05D006492 ORTHO05D008432 7.0e-119 432.6 749 36.7
SHI00019 Sapria himalayana HOM05D006492 ORTHO05D000009 1.8e-111 407.9 839 35.5
Zm00001eb003580 Zea mays HOM05D006492 ORTHO05D008432 8.0e-107 392.5 842 33.5
SEGI_21616 Sequoiadendron giganteum HOM05D006492 ORTHO05D008432 7.3e-92 342.8 738 32.5
Os03g0144000 Oryza sativa ssp. japonica HOM05D006492 ORTHO05D008432 1.4e-90 338.6 754 32.6
BraA10t42581Z Brassica rapa HOM05D006492 ORTHO05D008432 1.5e-73 282.0 549 34.1
HPP92_025559 Vanilla planifolia HOM05D006492 ORTHO05D008432 6.7e-45 186.8 348 36.8
Mapoly0061s0085 Marchantia polymorpha HOM05D006492 ORTHO05D008432 2.8e-27 128.3 445 24.9
arahy.Tifrunner.gnm1.ann1.LCJ3P1 Arachis hypogaea HOM05D006492 ORTHO05D008432 7.7e-25 120.2 141 46.8
Pp3c16_18660 Physcomitrium patens HOM05D006492 ORTHO05D008432 2.2e-24 118.6 500 25.0
C05p02850 Brassica napus HOM05D006492 ORTHO05D008432 3.8e-24 117.9 136 43.4
AagrBONN_evm.TU.Sc2ySwM_117.2272 Anthoceros agrestis HOM05D006492 ORTHO05D008432 3.0e-21 108.2 419 25.8
SMO117G0361 Selaginella moellendorffii HOM05D006492 ORTHO05D008432 3.3e-20 104.8 772 21.2
HPP92_025560 Vanilla planifolia HOM05D006492 ORTHO05D008432 1.1e-12 79.7 232 29.7
C05p02840 Brassica napus HOM05D006492 ORTHO05D008432 1.1e-10 73.2 98 37.8
CBR_g61877 Chara braunii HOM05D006492 ORTHO05D008432 2.4e-10 72.0 318 20.8
Atru.chr4.1801 Acer truncatum HOM05D006492 ORTHO05D008432 5.5e-07 60.8 57 52.6
Lju414A5G29 Lonicera japonica HOM05D006492 ORTHO05D008432 2.7e-06 58.5 51 58.8
Rhsim09G0049100 Rhododendron simsii HOM05D006492 ORTHO05D008432 2.7e-06 58.5 32 87.5


User provided reference genes

Program Settings