Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22806 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 3.8e-41 171.0 83 100.0
Rhsim03G0165600 Rhododendron simsii HOM05D004498 ORTHO05D005300 5.9e-34 147.1 78 85.9
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 1.7e-33 145.6 78 85.9
CSS0042388 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 5.0e-33 144.1 78 85.9
Actinidia13585 Actinidia chinensis HOM05D004498 ORTHO05D005300 3.2e-32 141.4 78 80.8
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 9.4e-32 139.8 78 78.2
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 2.1e-31 138.7 78 76.9
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 2.0e-29 132.1 78 73.1
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 2.6e-29 131.7 73 78.1
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 2.6e-29 131.7 78 74.4
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 4.8e-28 127.5 78 66.7
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 1.4e-27 125.9 81 67.9
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 1.8e-27 125.6 78 67.9
Hund20838 Selenicereus undatus HOM05D004498 ORTHO05D005300 2.4e-27 125.2 78 69.2
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 2.4e-27 125.2 78 71.8
Duzib084G1021 Durio zibethinus HOM05D004498 ORTHO05D005300 3.1e-27 124.8 78 70.5
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 3.1e-27 124.8 78 71.8
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 4.1e-27 124.4 78 71.8
Medtr4g036550 Medicago truncatula HOM05D004498 ORTHO05D005300 5.3e-27 124.0 78 69.2
Ca_02786_v3 Cicer arietinum L. HOM05D004498 ORTHO05D005300 7.0e-27 123.6 78 67.9
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 9.1e-27 123.2 78 67.9
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea HOM05D004498 ORTHO05D005300 1.2e-26 122.9 75 72.0
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 1.2e-26 122.9 78 67.9
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 1.6e-26 122.5 78 67.9
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 2.6e-26 121.7 78 66.7
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 2.6e-26 121.7 78 69.2
Psat6g116600 Pisum sativum HOM05D004498 ORTHO05D005300 3.5e-26 121.3 78 67.9
Manes.06G133200 Manihot esculenta HOM05D004498 ORTHO05D005300 5.9e-26 120.6 89 61.8
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 5.9e-26 120.6 78 70.5
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 7.7e-26 120.2 78 66.7
Psat6g142360 Pisum sativum HOM05D004498 ORTHO05D005300 7.7e-26 120.2 78 66.7
FvH4_3g41750 Fragaria vesca HOM05D004498 ORTHO05D005300 1.0e-25 119.8 78 62.8
FAN11G1420 Fragaria x ananassa HOM05D004498 ORTHO05D005300 1.0e-25 119.8 78 62.8
TPR.G3665 Trifolium pratense HOM05D004498 ORTHO05D005300 1.0e-25 119.8 78 65.4
Eucgr.G03077 Eucalyptus grandis HOM05D004498 ORTHO05D005300 1.3e-25 119.4 78 70.5
MD11G1042200 Malus domestica HOM05D004498 ORTHO05D005300 2.2e-25 118.6 78 64.1
Phvul.011G007100 Phaseolus vulgaris HOM05D004498 ORTHO05D005300 2.2e-25 118.6 78 65.4
RcHm_v2.0_Chr5g0074831 Rosa chinensis HOM05D004498 ORTHO05D005300 2.2e-25 118.6 78 61.5
TWI23G0902 Tripterygium wilfordii HOM05D004498 ORTHO05D005300 3.8e-25 117.9 81 59.3
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 8.5e-25 116.7 78 64.1
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 8.5e-25 116.7 78 64.1
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 8.5e-25 116.7 81 65.4
Lsat_1_v5_gn_8_10281 Lactuca sativa HOM05D004498 ORTHO05D005300 1.5e-24 115.9 81 60.5
GSVIVG01014038001 Vitis vinifera HOM05D004498 ORTHO05D005300 1.9e-24 115.5 78 67.9
Nn1g09635 Nelumbo nucifera HOM05D004498 ORTHO05D005300 5.5e-24 114.0 77 64.9
AUR62038145 Chenopodium quinoa HOM05D004498 ORTHO05D005300 7.2e-24 113.6 78 67.9
AUR62009833 Chenopodium quinoa HOM05D004498 ORTHO05D005300 9.4e-24 113.2 78 67.9
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 2.1e-23 112.1 78 59.0
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 4.7e-23 110.9 80 58.8
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 4.7e-23 110.9 78 64.1
Sopen05g030080 Solanum pennellii HOM05D004498 ORTHO05D005300 4.7e-23 110.9 78 64.1
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 8.0e-23 110.2 80 57.5
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 8.0e-23 110.2 80 57.5
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 8.0e-23 110.2 80 57.5
AL6G17950 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 1.4e-22 109.4 78 57.7
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 1.4e-22 109.4 81 61.7
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 2.3e-22 108.6 80 58.8
BcaNung06188 Brassica carinata HOM05D004498 ORTHO05D005300 2.3e-22 108.6 80 58.8
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 3.0e-22 108.2 79 58.2
EL10Ac7g16351 Beta vulgaris HOM05D004498 ORTHO05D005300 4.0e-22 107.8 78 64.1
PGSC0003DMG402007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 4.0e-22 107.8 77 64.9
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 8.8e-22 106.7 78 59.0
Aa31LG3G18790 Aethionema arabicum HOM05D004498 ORTHO05D005300 1.1e-21 106.3 78 57.7
Nitab4.5_0003647g0080 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.1e-21 106.3 78 57.7
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 1.1e-21 106.3 78 55.1
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 1.5e-21 105.9 78 56.4
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 1.5e-21 105.9 78 62.8
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 2.6e-21 105.1 78 60.3
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 2.6e-21 105.1 78 61.5
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 3.3e-21 104.8 80 57.5
Nitab4.5_0000818g0240 Nicotiana tabacum HOM05D004498 ORTHO05D005300 4.4e-21 104.4 78 56.4
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 7.5e-21 103.6 79 59.5
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 9.7e-21 103.2 79 59.5
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 1.3e-20 102.8 78 55.1
DCAR_009449 Daucus carota HOM05D004498 ORTHO05D005300 1.7e-20 102.4 78 57.7
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 2.2e-20 102.1 81 56.8
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 2.2e-20 102.1 81 56.8
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 4.8e-20 100.9 78 59.0
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 4.8e-20 100.9 78 53.8
Migut.G01109 Erythranthe guttata HOM05D004498 ORTHO05D005300 4.8e-20 100.9 78 53.8
Nitab4.5_0001187g0110 Nicotiana tabacum HOM05D004498 ORTHO05D005300 6.3e-20 100.5 78 56.4
Nitab4.5_0002764g0030 Nicotiana tabacum HOM05D004498 ORTHO05D005300 8.2e-20 100.1 78 56.4
Aqoxy3G03912 Aquilegia oxysepala HOM05D004498 ORTHO05D005300 1.4e-19 99.4 78 55.1
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 1.4e-19 99.4 78 53.8
SalBow7G0435 Salvia bowleyana HOM05D004498 ORTHO05D005300 1.4e-19 99.4 75 53.3
GSVIVG01037114001 Vitis vinifera HOM05D004498 ORTHO05D005300 1.4e-19 99.4 77 59.7
Migut.A00970 Erythranthe guttata HOM05D004498 ORTHO05D005300 2.0e-18 95.5 78 52.6
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 2.0e-18 95.5 78 52.6
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 2.7e-18 95.1 66 66.7
FAN21G3639 Fragaria x ananassa HOM05D004498 ORTHO05D005300 3.5e-18 94.7 60 61.7
FAN16G2392 Fragaria x ananassa HOM05D004498 ORTHO05D005300 5.9e-18 94.0 61 59.0
FAN25G1514 Fragaria x ananassa HOM05D004498 ORTHO05D005300 5.9e-18 94.0 61 60.7
SHI13988 Sapria himalayana HOM05D004498 ORTHO05D005300 2.9e-17 91.7 81 50.6
SGA_v2.0_scaffold115G32141 Striga asiatica HOM05D004498 ORTHO05D005300 1.9e-16 89.0 84 47.6
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 1.9e-16 89.0 77 57.1
BcaC06g32419 Brassica carinata HOM05D004498 ORTHO05D005300 4.2e-16 87.8 67 59.7
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 9.4e-16 86.7 67 59.7
SGA_v2.0_scaffold4035G54420 Striga asiatica HOM05D004498 ORTHO05D005300 9.4e-16 86.7 80 47.5
unitig_578.g16611 Utricularia gibba HOM05D004498 ORTHO05D005300 1.2e-15 86.3 79 49.4
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 2.3e-14 82.0 80 47.5
C09p69720 Brassica napus HOM05D004498 ORTHO05D005300 4.0e-14 81.3 56 55.4
BolC9t59715H Brassica oleracea HOM05D004498 ORTHO05D005300 4.0e-14 81.3 56 55.4
Glyma.12G006200 Glycine max HOM05D004498 ORTHO05D005300 6.8e-14 80.5 56 62.5
Zm00001eb105090 Zea mays HOM05D004498 ORTHO05D005300 2.0e-13 79.0 79 49.4
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 7.5e-13 77.0 69 52.2
Peaxi162Scf00167g00733 Petunia axillaris HOM05D004498 ORTHO05D005300 1.4e-11 72.8 58 51.7
SEGI_08016 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 4.1e-11 71.2 80 45.0
SEGI_20600 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 4.1e-11 71.2 80 45.0
Lj3g0020155 Lotus japonicus HOM05D004498 ORTHO05D005300 6.5e-09 63.9 52 59.6
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 1.5e-08 62.8 39 74.4
Pp3c18_8280 Physcomitrium patens HOM05D004498 ORTHO05D005300 2.5e-08 62.0 76 39.5
Mapoly0124s0016 Marchantia polymorpha HOM05D004498 ORTHO05D005300 6.1e-07 57.4 80 41.2


User provided reference genes

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