Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 6.1e-61 237.3 117 100.0
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 2.7e-40 168.7 180 55.6
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 1.2e-35 153.3 181 52.5
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 1.4e-33 146.4 119 63.0
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 3.1e-33 145.2 180 46.7
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 7.0e-33 144.1 180 46.1
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 1.2e-32 143.3 180 46.1
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 1.6e-32 142.9 180 46.1
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 2.7e-32 142.1 180 45.6
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 3.5e-32 141.7 180 48.9
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 7.8e-32 140.6 180 48.3
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 7.8e-32 140.6 180 44.4
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 1.0e-31 140.2 180 45.6
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.3e-31 139.8 174 50.0
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 1.3e-31 139.8 180 44.4
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 1.3e-31 139.8 180 47.2
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.7e-31 139.4 176 48.9
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 2.3e-31 139.0 180 46.1
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 2.3e-31 139.0 175 47.4
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 2.9e-31 138.7 180 46.7
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 2.9e-31 138.7 180 45.6
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 3.8e-31 138.3 180 44.4
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 5.0e-31 137.9 180 44.4
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 6.6e-31 137.5 180 47.2
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 1.9e-30 136.0 180 45.0
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 4.3e-30 134.8 181 44.8
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 5.6e-30 134.4 175 45.1
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 5.6e-30 134.4 175 45.1
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 7.3e-30 134.0 180 45.0
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 7.3e-30 134.0 180 43.9
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 7.3e-30 134.0 180 43.9
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 9.5e-30 133.7 180 44.4
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 1.2e-29 133.3 180 44.4
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 1.2e-29 133.3 180 43.9
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 1.6e-29 132.9 180 45.0
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 2.8e-29 132.1 180 43.3
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 3.6e-29 131.7 182 45.1
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 4.7e-29 131.3 180 43.9
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 4.7e-29 131.3 180 43.3
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 6.1e-29 131.0 180 41.7
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 8.0e-29 130.6 180 43.9
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 8.0e-29 130.6 180 44.4
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 8.0e-29 130.6 175 45.1
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.4e-28 129.8 197 41.1
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 1.8e-28 129.4 180 42.8
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 2.3e-28 129.0 176 44.3
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 2.3e-28 129.0 184 44.0
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 6.8e-28 127.5 180 42.8
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 1.5e-27 126.3 178 44.4
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 2.6e-27 125.6 182 42.3
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 5.8e-27 124.4 180 40.0
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 7.5e-27 124.0 169 44.4
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 7.5e-27 124.0 180 44.4
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 2.9e-26 122.1 169 43.2
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 2.9e-26 122.1 187 43.3
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 6.4e-26 120.9 175 45.7
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 1.9e-25 119.4 180 40.6
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 3.2e-25 118.6 195 40.5
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 5.4e-25 117.9 181 40.9
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 9.2e-25 117.1 180 40.0
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 9.2e-25 117.1 103 62.1
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 2.7e-24 115.5 180 38.9
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 2.7e-24 115.5 176 39.2
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 6.0e-24 114.4 211 34.6
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 6.0e-24 114.4 200 37.5
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 7.8e-24 114.0 177 39.0
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 1.3e-23 113.2 176 39.8
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 1.7e-23 112.8 170 42.4
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 3.0e-23 112.1 175 38.9
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 6.6e-23 110.9 176 39.8
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 1.5e-22 109.8 176 40.9
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 1.5e-22 109.8 180 37.8
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 7.3e-22 107.5 182 40.7
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 1.2e-21 106.7 179 39.1
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 6.2e-21 104.4 169 40.2
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 6.2e-21 104.4 181 38.7
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 3.1e-20 102.1 167 38.9
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 6.8e-20 100.9 184 37.5
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 7.5e-19 97.4 86 59.3
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 9.8e-19 97.1 170 37.1
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 1.7e-18 96.3 169 36.1
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.9e-18 95.5 75 62.7
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 3.7e-18 95.1 180 37.8
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 3.7e-18 95.1 180 37.2
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 3.2e-17 92.0 131 45.0
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 4.1e-17 91.7 60 70.0
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 7.0e-17 90.9 68 69.1
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 3.5e-16 88.6 59 72.9
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 3.9e-15 85.1 143 37.1
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 6.6e-15 84.3 61 67.2
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.5e-14 83.2 61 68.9
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 8.1e-13 77.4 57 61.4
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 8.1e-13 77.4 77 53.2
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 1.8e-12 76.3 40 77.5
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 1.8e-12 76.3 40 77.5
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 2.3e-12 75.9 49 69.4
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 3.4e-11 72.0 40 70.0
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 2.4e-09 65.9 39 71.8
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 4.1e-09 65.1 35 74.3
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 9.2e-09 63.9 163 28.2
TPR.G22507 Trifolium pratense HOM05D006956 ORTHO05D008824 3.0e-07 58.9 37 73.0
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 5.1e-07 58.2 43 67.4
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 5.1e-07 58.2 168 26.2
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 8.6e-07 57.4 39 61.5


User provided reference genes

Program Settings