Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 6.3e-129 464.2 240 100.0
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.7e-121 439.5 240 95.0
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 9.8e-98 360.5 218 85.8
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.3e-97 360.1 204 90.7
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 6.6e-78 294.7 192 78.6
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.9e-77 293.1 192 78.1
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 3.6e-76 288.9 192 74.5
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 2.6e-74 282.7 192 72.9
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 4.4e-74 282.0 191 71.7
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 7.5e-74 281.2 202 69.8
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 2.4e-72 276.2 203 67.0
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 2.4e-72 276.2 189 73.0
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 5.4e-72 275.0 192 72.4
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 9.2e-72 274.2 194 69.6
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 2.1e-71 273.1 192 71.9
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 2.7e-71 272.7 192 69.8
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 3.5e-71 272.3 201 66.7
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.3e-70 270.4 187 72.2
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 1.3e-70 270.4 192 69.3
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 1.7e-70 270.0 192 72.4
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 1.7e-70 270.0 191 70.2
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 2.3e-70 269.6 193 67.9
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 2.3e-70 269.6 189 70.4
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 2.3e-70 269.6 192 69.3
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 2.3e-70 269.6 187 72.7
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 2.3e-70 269.6 201 66.2
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 3.3e-69 265.8 192 68.8
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 3.3e-69 265.8 191 70.2
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 5.6e-69 265.0 194 68.6
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 5.6e-69 265.0 192 69.3
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 9.5e-69 264.2 192 71.4
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 9.5e-69 264.2 192 68.2
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 1.2e-68 263.8 191 69.1
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 1.2e-68 263.8 192 69.8
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 1.6e-68 263.5 191 70.2
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 1.6e-68 263.5 191 69.1
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 2.8e-68 262.7 199 66.8
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.6e-68 262.3 197 70.1
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 6.2e-68 261.5 195 66.7
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 8.1e-68 261.2 194 66.5
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 8.1e-68 261.2 193 66.8
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 1.1e-67 260.8 192 69.3
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 1.1e-67 260.8 193 65.3
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 1.4e-67 260.4 189 67.2
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.8e-67 260.0 192 66.7
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 4.0e-67 258.8 192 65.6
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 5.2e-67 258.5 187 69.5
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 5.2e-67 258.5 189 69.3
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 1.5e-66 256.9 190 68.9
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.5e-66 256.9 191 65.4
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 2.0e-66 256.5 187 69.5
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 2.6e-66 256.1 191 67.0
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 2.6e-66 256.1 192 67.7
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 4.4e-66 255.4 192 65.6
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 7.6e-66 254.6 185 71.4
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 7.6e-66 254.6 192 66.7
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 1.3e-65 253.8 190 66.8
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.7e-65 253.4 192 65.6
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 1.7e-65 253.4 192 65.6
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 2.2e-65 253.1 190 68.4
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 2.2e-65 253.1 187 67.9
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 2.9e-65 252.7 189 66.7
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 3.8e-65 252.3 190 69.5
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 3.8e-65 252.3 187 68.4
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 4.9e-65 251.9 190 65.8
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 6.4e-65 251.5 192 68.8
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 6.4e-65 251.5 185 70.3
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 8.4e-65 251.1 200 65.0
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 8.4e-65 251.1 190 68.4
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 8.4e-65 251.1 190 68.4
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 8.4e-65 251.1 193 64.8
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 8.4e-65 251.1 193 64.8
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 8.4e-65 251.1 192 63.5
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.1e-64 250.8 193 64.8
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 1.1e-64 250.8 193 65.3
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 1.4e-64 250.4 190 65.8
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 1.4e-64 250.4 187 66.8
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 1.9e-64 250.0 190 63.2
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 3.2e-64 249.2 189 64.6
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 4.1e-64 248.8 192 67.7
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 5.4e-64 248.4 205 62.9
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 7.1e-64 248.1 197 66.0
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 4.6e-63 245.4 190 64.2
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 6.0e-63 245.0 191 64.4
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 1.0e-62 244.2 183 67.2
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 3.0e-62 242.7 201 64.7
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 1.5e-61 240.4 189 66.7
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 3.3e-61 239.2 159 79.9
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 2.6e-58 229.6 159 74.2
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 9.9e-58 227.6 298 47.3
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 4.2e-56 222.2 135 80.7
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 1.2e-55 220.7 192 59.9
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 3.5e-55 219.2 190 55.3
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.3e-54 217.2 158 71.5
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 1.1e-53 214.2 188 56.9
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 2.8e-52 209.5 187 57.8
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 1.4e-51 207.2 158 64.6
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 2.4e-51 206.5 159 67.9
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 3.8e-49 199.1 158 65.8
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 1.1e-48 197.6 167 62.9
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 4.6e-47 192.2 192 54.7
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 5.1e-46 188.7 166 59.0
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 1.1e-45 187.6 195 53.8
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 5.6e-45 185.3 162 58.6
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 1.1e-43 181.0 139 62.6
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 5.3e-43 178.7 158 56.3
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 5.3e-43 178.7 193 50.8
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.2e-39 167.5 133 69.2
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.6e-36 157.1 191 46.1
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 1.6e-31 140.6 192 42.2
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 5.7e-29 132.1 187 41.7
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 6.3e-28 128.6 187 42.8
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 1.1e-27 127.9 78 79.5
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 1.0e-17 94.7 56 80.4
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.0e-06 58.2 53 54.7


User provided reference genes

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