Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22632 Vaccinium macrocarpon HOM05D003968 ORTHO05D004077 4.9e-79 298.1 196 100.0
QL03p050330 Quercus lobata HOM05D003968 ORTHO05D004077 7.6e-48 194.5 195 55.9
Actinidia30604 Actinidia chinensis HOM05D003968 ORTHO05D004077 6.4e-47 191.4 196 62.8
Duzib251G0690 Durio zibethinus HOM05D003968 ORTHO05D004077 1.1e-46 190.7 201 73.1
Cfa009411 Carpinus fangiana HOM05D003968 ORTHO05D004077 2.4e-46 189.5 195 59.0
CSS0002178 Camellia sinensis var. sinensis HOM05D003968 ORTHO05D004077 1.2e-45 187.2 195 66.7
Haze_12469 Corylus avellana HOM05D003968 ORTHO05D004077 1.2e-45 187.2 195 57.4
Dinv17895 Davidia involucrata HOM05D003968 ORTHO05D004077 1.2e-45 187.2 195 74.9
Peaxi162Scf00128g01760 Petunia axillaris HOM05D003968 ORTHO05D004077 2.1e-45 186.4 195 53.3
Actinidia22131 Actinidia chinensis HOM05D003968 ORTHO05D004077 2.7e-45 186.0 195 75.4
Manes.08G103100 Manihot esculenta HOM05D003968 ORTHO05D004077 3.9e-44 182.2 209 56.9
Nitab4.5_0007554g0020 Nicotiana tabacum HOM05D003968 ORTHO05D004077 5.1e-44 181.8 199 58.3
CiPaw.05G103900 Carya illinoinensis HOM05D003968 ORTHO05D004077 1.1e-43 180.6 195 56.9
Oeu003280.1 Olea europaea HOM05D003968 ORTHO05D004077 3.3e-43 179.1 199 52.8
Peaxi162Scf00758g00054 Petunia axillaris HOM05D003968 ORTHO05D004077 3.3e-43 179.1 199 72.9
PGR057G0001 Punica granatum HOM05D003968 ORTHO05D004077 3.3e-43 179.1 195 65.6
PGR119G2322 Punica granatum HOM05D003968 ORTHO05D004077 3.3e-43 179.1 195 65.6
CiPaw.06G107600 Carya illinoinensis HOM05D003968 ORTHO05D004077 1.3e-42 177.2 190 60.0
Thecc.02G196200 Theobroma cacao HOM05D003968 ORTHO05D004077 2.8e-42 176.0 197 71.1
CSS0048086 Camellia sinensis var. sinensis HOM05D003968 ORTHO05D004077 3.6e-42 175.6 205 70.7
Ciclev10032280m.g Citrus clementina HOM05D003968 ORTHO05D004077 3.6e-42 175.6 198 72.2
Duzib248G0844 Durio zibethinus HOM05D003968 ORTHO05D004077 3.6e-42 175.6 196 63.3
ECA233G5077 Erigeron canadensis HOM05D003968 ORTHO05D004077 4.8e-42 175.3 203 71.4
Manes.09G185900 Manihot esculenta HOM05D003968 ORTHO05D004077 1.1e-41 174.1 217 58.1
RcHm_v2.0_Chr4g0429341 Rosa chinensis HOM05D003968 ORTHO05D004077 4.0e-41 172.2 212 67.0
GSVIVG01000957001 Vitis vinifera HOM05D003968 ORTHO05D004077 4.0e-41 172.2 192 62.5
TAR629G0662 Trochodendron aralioides HOM05D003968 ORTHO05D004077 5.3e-41 171.8 197 59.4
MSTRG.8041 Avicennia marina HOM05D003968 ORTHO05D004077 1.2e-40 170.6 199 56.8
Glyma.18G302000 Glycine max HOM05D003968 ORTHO05D004077 1.2e-40 170.6 202 61.4
Potri.001G062000 Populus trichocarpa HOM05D003968 ORTHO05D004077 1.2e-40 170.6 197 56.3
Duzib052G1223 Durio zibethinus HOM05D003968 ORTHO05D004077 1.5e-40 170.2 201 67.7
Lsat_1_v5_gn_8_147160 Lactuca sativa HOM05D003968 ORTHO05D004077 1.5e-40 170.2 242 55.4
Gohir.D12G145000 Gossypium hirsutum HOM05D003968 ORTHO05D004077 2.6e-40 169.5 199 65.8
MSTRG.468 Avicennia marina HOM05D003968 ORTHO05D004077 3.4e-40 169.1 208 54.3
Gorai.008G156400 Gossypium raimondii HOM05D003968 ORTHO05D004077 3.4e-40 169.1 201 65.2
Gohir.A12G140400 Gossypium hirsutum HOM05D003968 ORTHO05D004077 4.5e-40 168.7 202 64.4
MD13G1126400 Malus domestica HOM05D003968 ORTHO05D004077 1.3e-39 167.2 209 63.6
VMungo1383G2332 Vigna mungo HOM05D003968 ORTHO05D004077 1.3e-39 167.2 198 52.0
HanXRQChr08g0210131 Helianthus annuus HOM05D003968 ORTHO05D004077 1.7e-39 166.8 210 61.9
Hma1.2p1_0459F.1_g157230 Hydrangea macrophylla HOM05D003968 ORTHO05D004077 1.7e-39 166.8 200 69.5
Sabra01G0044600 Salix brachista HOM05D003968 ORTHO05D004077 2.2e-39 166.4 197 54.8
FAN12G2512 Fragaria x ananassa HOM05D003968 ORTHO05D004077 2.9e-39 166.0 213 64.3
Phvul.008G000400 Phaseolus vulgaris HOM05D003968 ORTHO05D004077 6.4e-39 164.9 199 50.3
Potri.003G165800 Populus trichocarpa HOM05D003968 ORTHO05D004077 8.4e-39 164.5 195 54.9
FvH4_4g23070 Fragaria vesca HOM05D003968 ORTHO05D004077 1.4e-38 163.7 214 64.5
arahy.Tifrunner.gnm1.ann1.GKU1A2 Arachis hypogaea HOM05D003968 ORTHO05D004077 1.9e-38 163.3 216 62.5
TWI75G0242 Tripterygium wilfordii HOM05D003968 ORTHO05D004077 1.9e-38 163.3 206 55.3
arahy.Tifrunner.gnm1.ann1.25I2B1 Arachis hypogaea HOM05D003968 ORTHO05D004077 2.4e-38 162.9 209 63.2
MD16G1126900 Malus domestica HOM05D003968 ORTHO05D004077 2.4e-38 162.9 220 60.9
Nn3g16325 Nelumbo nucifera HOM05D003968 ORTHO05D004077 2.4e-38 162.9 196 58.2
SalBow2G1659 Salvia bowleyana HOM05D003968 ORTHO05D004077 2.4e-38 162.9 210 53.3
CSS0023603 Camellia sinensis var. sinensis HOM05D003968 ORTHO05D004077 7.1e-38 161.4 199 51.3
Lj6C835T0 Lonicera japonica HOM05D003968 ORTHO05D004077 7.1e-38 161.4 194 58.2
Nitab4.5_0001600g0080 Nicotiana tabacum HOM05D003968 ORTHO05D004077 7.1e-38 161.4 210 52.4
Rhsim12G0020700 Rhododendron simsii HOM05D003968 ORTHO05D004077 9.3e-38 161.0 207 49.8
Eucgr.H03380 Eucalyptus grandis HOM05D003968 ORTHO05D004077 2.1e-37 159.8 205 56.1
Sabra03G0121000 Salix brachista HOM05D003968 ORTHO05D004077 3.5e-37 159.1 195 50.8
HanXRQChr12g0362341 Helianthus annuus HOM05D003968 ORTHO05D004077 4.6e-37 158.7 198 63.6
THA.LOC104814203 Tarenaya hassleriana HOM05D003968 ORTHO05D004077 4.6e-37 158.7 194 56.7
Prupe.1G219000 Prunus persica HOM05D003968 ORTHO05D004077 1.8e-36 156.8 222 52.3
Sc11g0000210 Simmondsia chinensis HOM05D003968 ORTHO05D004077 1.8e-36 156.8 220 51.8
TWI18G0914 Tripterygium wilfordii HOM05D003968 ORTHO05D004077 2.3e-36 156.4 199 52.3
Migut.K01036 Erythranthe guttata HOM05D003968 ORTHO05D004077 3.0e-36 156.0 206 57.8
Lalb_Chr04g0257091 Lupinus albus HOM05D003968 ORTHO05D004077 5.1e-36 155.2 193 69.9
THA.LOC104820530 Tarenaya hassleriana HOM05D003968 ORTHO05D004077 6.7e-36 154.8 202 53.5
AL4G29180 Arabidopsis lyrata HOM05D003968 ORTHO05D004077 1.5e-35 153.7 198 61.1
FAN17G1317 Fragaria x ananassa HOM05D003968 ORTHO05D004077 1.9e-35 153.3 241 58.5
CAN.G1277.6 Capsicum annuum HOM05D003968 ORTHO05D004077 3.3e-35 152.5 204 54.4
Carub.0004s1514 Capsella rubella HOM05D003968 ORTHO05D004077 5.6e-35 151.8 198 64.6
MBI07_g37482_MAGBIO Magnolia biondii HOM05D003968 ORTHO05D004077 5.6e-35 151.8 195 57.4
TWI36G1280 Tripterygium wilfordii HOM05D003968 ORTHO05D004077 5.6e-35 151.8 201 44.8
Atru.chr11.2403 Acer truncatum HOM05D003968 ORTHO05D004077 7.4e-35 151.4 207 61.8
Thhalv10017284m.g Eutrema salsugineum HOM05D003968 ORTHO05D004077 7.4e-35 151.4 194 62.4
unitig_747.g21116 Utricularia gibba HOM05D003968 ORTHO05D004077 1.3e-34 150.6 203 44.3
AT2G33510 Arabidopsis thaliana HOM05D003968 ORTHO05D004077 1.6e-34 150.2 199 63.3
CARHR127520 Cardamine hirsuta HOM05D003968 ORTHO05D004077 2.1e-34 149.8 195 61.5
COL.COLO4_11740 Corchorus olitorius HOM05D003968 ORTHO05D004077 2.1e-34 149.8 209 55.5
CANSAT56G0023 Cannabis sativa HOM05D003968 ORTHO05D004077 2.8e-34 149.4 224 54.5
Sed0024018 Sechium edule HOM05D003968 ORTHO05D004077 1.1e-33 147.5 197 67.5
Cpa.g.sc123.52 Carica papaya HOM05D003968 ORTHO05D004077 3.1e-33 146.0 214 49.1
ClCG07G011730 Citrullus lanatus HOM05D003968 ORTHO05D004077 9.0e-33 144.4 199 64.3
Lsat_1_v5_gn_4_1260 Lactuca sativa HOM05D003968 ORTHO05D004077 1.2e-32 144.1 196 62.2
CDE02G3264 Ceratophyllum demersum HOM05D003278 ORTHO05D003738 1.5e-32 143.7 196 44.9
FAN07G1723 Fragaria x ananassa HOM05D003968 ORTHO05D004077 1.5e-32 143.7 233 53.2
Ah.03g135740 Amaranthus hybridus HOM05D003968 ORTHO05D004077 2.0e-32 143.3 227 48.0
BcaB06g28694 Brassica carinata HOM05D003968 ORTHO05D004077 2.6e-32 142.9 211 53.6
Cc11_g17440 Coffea canephora HOM05D003968 ORTHO05D004077 2.6e-32 142.9 233 54.5
Medtr7g005500 Medicago truncatula HOM05D003968 ORTHO05D004077 3.4e-32 142.5 206 54.9
BcaB02g10569 Brassica carinata HOM05D003968 ORTHO05D004077 4.5e-32 142.1 204 62.7
A05p12030 Brassica napus HOM05D003968 ORTHO05D004077 5.8e-32 141.7 202 62.4
BcaC01g05837 Brassica carinata HOM05D003968 ORTHO05D004077 1.3e-31 140.6 196 57.1
CDE06G0253 Ceratophyllum demersum HOM05D003968 ORTHO05D004077 2.9e-31 139.4 195 43.6
Ah.02g131150 Amaranthus hybridus HOM05D003968 ORTHO05D004077 3.8e-31 139.0 222 44.1
BcaC02g07799 Brassica carinata HOM05D003968 ORTHO05D004077 4.9e-31 138.7 205 53.7
C03p21930 Brassica napus HOM05D003968 ORTHO05D004077 4.9e-31 138.7 192 57.8
BcaC02g11436 Brassica carinata HOM05D003968 ORTHO05D004077 6.4e-31 138.3 209 64.1
C04p15610 Brassica napus HOM05D003968 ORTHO05D004077 6.4e-31 138.3 209 64.1
DCAR_024638 Daucus carota HOM05D003968 ORTHO05D004077 6.4e-31 138.3 235 49.4
C04p63030 Brassica napus HOM05D003968 ORTHO05D004077 1.1e-30 137.5 205 54.1
Lj1g0012774 Lotus japonicus HOM05D003968 ORTHO05D004077 1.1e-30 137.5 201 47.8
Lalb_Chr14g0375131 Lupinus albus HOM05D003968 ORTHO05D004077 5.5e-30 135.2 190 60.5
A03p18770 Brassica napus HOM05D003968 ORTHO05D004077 7.1e-30 134.8 191 58.6
A04p25820 Brassica napus HOM05D003968 ORTHO05D004077 7.1e-30 134.8 202 58.4
Aqoxy5G03211 Aquilegia oxysepala HOM05D003968 ORTHO05D004077 9.3e-30 134.4 199 59.3
BraA03t11137Z Brassica rapa HOM05D003968 ORTHO05D004077 1.2e-29 134.0 191 58.6
Nn4g22193 Nelumbo nucifera HOM05D003968 ORTHO05D004077 1.2e-29 134.0 194 50.5
Solyc01g009770.3 Solanum lycopersicum HOM05D003968 ORTHO05D004077 1.2e-29 134.0 208 43.3
Sp4g15850 Schrenkiella parvula HOM05D003968 ORTHO05D004077 1.6e-29 133.7 196 57.7
Sopen01g005310 Solanum pennellii HOM05D003968 ORTHO05D004077 1.6e-29 133.7 216 48.6
BcaB01g03931 Brassica carinata HOM05D003968 ORTHO05D004077 2.1e-29 133.3 190 58.4
THA.LOC104812600 Tarenaya hassleriana HOM05D003968 ORTHO05D004077 6.0e-29 131.7 199 52.3
Aa31LG9G13440 Aethionema arabicum HOM05D003968 ORTHO05D004077 7.9e-29 131.3 187 56.7
TPR.G15634 Trifolium pratense HOM05D003968 ORTHO05D004077 1.8e-28 130.2 196 64.3
unitig_749.g13321 Utricularia gibba HOM05D003968 ORTHO05D004077 1.8e-28 130.2 194 41.8
MBI11_g37080_MAGBIO Magnolia biondii HOM05D003968 ORTHO05D004077 2.3e-28 129.8 151 58.3
PSO478G1150 Papaver somniferum HOM05D003968 ORTHO05D004077 2.3e-28 129.8 201 57.7
BraA05t20145Z Brassica rapa HOM05D003968 ORTHO05D004077 3.0e-28 129.4 215 55.8
BolC4t27780H Brassica oleracea HOM05D003968 ORTHO05D004077 6.7e-28 128.3 218 50.9
Psat0s2399g0040 Pisum sativum HOM05D003968 ORTHO05D004077 6.7e-28 128.3 211 45.5
unitig_26.g10423 Utricularia gibba HOM05D003968 ORTHO05D004077 6.7e-28 128.3 156 46.2
Sp1g24250 Schrenkiella parvula HOM05D003968 ORTHO05D004077 8.7e-28 127.9 198 54.5
PSO017G3780 Papaver somniferum HOM05D003968 ORTHO05D004077 1.1e-27 127.5 201 57.2
BraA04t18084Z Brassica rapa HOM05D003968 ORTHO05D004077 4.3e-27 125.6 213 51.2
PGSC0003DMG400030000 Solanum tuberosum HOM05D003968 ORTHO05D004077 5.6e-27 125.2 214 41.1
BraA08t34544Z Brassica rapa HOM05D003968 ORTHO05D004077 9.6e-27 124.4 200 51.0
BolC4t23129H Brassica oleracea HOM05D003968 ORTHO05D004077 1.3e-26 124.0 222 59.5
Hund25497 Selenicereus undatus HOM05D003968 ORTHO05D004077 2.1e-26 123.2 211 48.8
MELO3C022347.2 Cucumis melo HOM05D003968 ORTHO05D004077 3.7e-26 122.5 203 48.3
ClCG06G001810 Citrullus lanatus HOM05D003968 ORTHO05D004077 8.2e-26 121.3 211 50.7
CsaV3_6G007850 Cucumis sativus L. HOM05D003968 ORTHO05D004077 1.4e-25 120.6 203 50.2
Thhalv10008849m.g Eutrema salsugineum HOM05D003968 ORTHO05D004077 1.8e-25 120.2 197 57.9
A07p11490 Brassica napus HOM05D003968 ORTHO05D004077 2.4e-25 119.8 197 40.6
BraA07t28938Z Brassica rapa HOM05D003968 ORTHO05D004077 2.4e-25 119.8 197 40.6
BcaB03g13960 Brassica carinata HOM05D003968 ORTHO05D004077 3.1e-25 119.4 196 39.8
Aa31sc415G10 Aethionema arabicum HOM05D003968 ORTHO05D004077 4.0e-25 119.0 197 53.3
AT1G28070 Arabidopsis thaliana HOM05D003968 ORTHO05D004077 4.0e-25 119.0 189 54.5
Sed0012192 Sechium edule HOM05D003968 ORTHO05D004077 6.9e-25 118.2 198 54.0
A08p25930 Brassica napus HOM05D003968 ORTHO05D004077 2.6e-24 116.3 197 48.7
Carub.0001s2650 Capsella rubella HOM05D003968 ORTHO05D004077 5.8e-24 115.2 197 53.3
CsaV3_4G002470 Cucumis sativus L. HOM05D003968 ORTHO05D004077 2.9e-23 112.8 206 57.8
C03p74720 Brassica napus HOM05D003968 ORTHO05D004077 4.9e-23 112.1 197 48.7
BolC3t19720H Brassica oleracea HOM05D003968 ORTHO05D004077 6.5e-23 111.7 198 49.0
PSO229G0040 Papaver somniferum HOM05D003968 ORTHO05D004077 6.5e-23 111.7 192 42.7
CARHR027520 Cardamine hirsuta HOM05D003968 ORTHO05D004077 1.4e-22 110.5 192 49.5
TAR622G0782 Trochodendron aralioides HOM05D003968 ORTHO05D004077 2.5e-22 109.8 189 41.8
ATR0582G076 Amborella trichopoda HOM05D003968 ORTHO05D004077 3.2e-22 109.4 192 41.1
BcaC01g00004 Brassica carinata HOM05D003968 ORTHO05D004077 3.2e-22 109.4 198 48.0
PSO675G4434 Papaver somniferum HOM05D003968 ORTHO05D004077 5.5e-22 108.6 187 43.9
SGA_v2.0_scaffold80G25944 Striga asiatica HOM05D003968 ORTHO05D004077 1.2e-21 107.5 110 57.3
BcaC05g26810 Brassica carinata HOM05D003968 ORTHO05D004077 7.9e-21 104.8 149 44.3
Oeu019428.1 Olea europaea HOM05D003968 ORTHO05D004077 1.0e-20 104.4 188 37.8
MELO3C017796.2 Cucumis melo HOM05D003968 ORTHO05D004077 2.3e-20 103.2 219 54.3
CSS0031909 Camellia sinensis var. sinensis HOM05D003968 ORTHO05D004077 6.7e-20 101.7 228 38.6
BcaC06g35328 Brassica carinata HOM05D003968 ORTHO05D004077 8.7e-20 101.3 196 37.8
C07p17340 Brassica napus HOM05D003968 ORTHO05D004077 8.7e-20 101.3 196 37.8
BolC7t42238H Brassica oleracea HOM05D003968 ORTHO05D004077 8.7e-20 101.3 196 37.8
A09p38020 Brassica napus HOM05D003968 ORTHO05D004077 1.3e-18 97.4 139 56.8
BraA09t39312Z Brassica rapa HOM05D003968 ORTHO05D004077 1.3e-18 97.4 139 56.8
BcaC05g26624 Brassica carinata HOM05D003968 ORTHO05D004077 2.2e-18 96.7 139 57.6
C05p26740 Brassica napus HOM05D003968 ORTHO05D004077 2.2e-18 96.7 139 57.6
HPP92_023087 Vanilla planifolia HOM05D003968 ORTHO05D004077 7.7e-16 88.2 216 37.0
Gohir.D01G019600 Gossypium hirsutum HOM05D003968 ORTHO05D004077 2.1e-13 80.1 195 50.8
Gorai.002G022000 Gossypium raimondii HOM05D003968 ORTHO05D004077 2.1e-13 80.1 195 51.3
BolC5t31398H Brassica oleracea HOM05D003968 ORTHO05D004077 7.9e-13 78.2 139 51.8
Gohir.A01G021200 Gossypium hirsutum HOM05D003968 ORTHO05D004077 3.0e-12 76.3 196 50.5
HPP92_006446 Vanilla planifolia HOM05D003968 ORTHO05D004077 1.1e-11 74.3 219 34.2
Os02g0516400 Oryza sativa ssp. japonica HOM05D003968 ORTHO05D004077 2.5e-11 73.2 101 40.6
MBI01_g34379_MAGBIO Magnolia biondii HOM05D003968 ORTHO05D004077 4.3e-11 72.4 119 45.4
HPP92_011550 Vanilla planifolia HOM05D003968 ORTHO05D004077 4.3e-11 72.4 217 40.1
CDE09G1092 Ceratophyllum demersum HOM05D003968 ORTHO05D004077 2.4e-09 66.6 195 27.7
BcaC05g26622 Brassica carinata HOM05D003968 ORTHO05D004077 9.1e-09 64.7 40 67.5
CDE02G1122 Ceratophyllum demersum HOM05D003968 ORTHO05D004077 2.0e-08 63.5 146 28.1
AL1G41580 Arabidopsis lyrata HOM05D003968 ORTHO05D004077 1.3e-07 60.8 38 71.1
Pp3c16_12300 Physcomitrium patens HOM05D013579 ORTHO05D001508 6.5e-07 58.5 65 44.6
SEGI_36735 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 3.2e-06 56.2 155 31.0
Mapoly0029s0076 Marchantia polymorpha HOM05D013579 ORTHO05D015305 9.4e-06 54.7 59 40.7
Pp3c27_4970 Physcomitrium patens HOM05D013579 ORTHO05D004077 9.4e-06 54.7 65 41.5


User provided reference genes

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