Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 1.8e-162 575.9 285 100.0
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 8.6e-101 370.9 287 66.6
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 4.1e-95 352.1 222 80.2
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.5e-92 343.6 288 62.2
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 2.6e-81 306.2 287 58.5
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.9e-79 300.1 282 58.2
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 3.2e-79 299.3 283 56.5
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 4.2e-79 298.9 283 57.6
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 2.1e-78 296.6 289 57.8
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 3.5e-78 295.8 283 56.2
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 6.6e-77 291.6 282 55.3
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 9.6e-76 287.7 280 57.5
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 8.1e-75 284.6 281 53.7
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 1.1e-74 284.3 283 56.5
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 6.9e-74 281.6 278 52.9
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 1.5e-73 280.4 280 55.7
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 1.3e-72 277.3 284 53.9
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 6.4e-72 275.0 284 54.9
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 8.4e-72 274.6 283 56.2
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 8.4e-72 274.6 284 53.5
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.1e-71 274.2 283 56.5
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 1.1e-71 274.2 283 56.2
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 1.4e-71 273.9 214 63.1
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 1.9e-71 273.5 283 51.9
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 1.9e-71 273.5 286 52.8
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 2.4e-71 273.1 229 59.0
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 2.4e-71 273.1 290 54.1
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 7.1e-71 271.6 282 52.1
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 7.1e-71 271.6 284 54.6
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 1.2e-70 270.8 214 62.1
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 2.1e-70 270.0 261 55.2
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 2.1e-70 270.0 282 52.5
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 2.1e-70 270.0 214 62.1
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 2.1e-70 270.0 217 62.2
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 2.3e-69 266.5 220 60.0
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 3.9e-69 265.8 282 54.3
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 3.9e-69 265.8 276 51.8
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 8.7e-69 264.6 240 56.2
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 1.1e-68 264.2 284 51.1
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 1.1e-68 264.2 281 53.4
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 4.3e-68 262.3 227 57.7
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 5.6e-68 261.9 234 55.6
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.3e-67 260.8 272 52.9
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 1.6e-67 260.4 278 51.8
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 1.6e-67 260.4 281 53.4
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 2.8e-67 259.6 291 50.9
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.8e-67 259.6 288 50.7
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.8e-67 259.6 291 50.9
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 6.2e-67 258.5 284 51.8
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 8.1e-67 258.1 279 49.1
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 9.0e-66 254.6 283 51.6
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 9.0e-66 254.6 281 50.9
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 1.2e-65 254.2 257 54.1
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.2e-65 254.2 291 50.2
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 4.5e-65 252.3 279 54.1
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 1.3e-64 250.8 218 60.6
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 1.4e-63 247.3 279 48.4
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 3.2e-63 246.1 279 50.9
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 4.2e-63 245.7 228 56.6
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 5.4e-63 245.4 269 49.1
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 2.1e-62 243.4 284 48.9
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 2.7e-62 243.0 277 48.0
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 3.5e-62 242.7 195 63.1
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 4.6e-62 242.3 288 46.5
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 2.3e-61 240.0 278 54.0
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 5.1e-61 238.8 282 51.1
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 8.7e-61 238.0 279 51.3
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.5e-60 237.3 280 48.9
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 1.9e-60 236.9 281 49.1
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 1.9e-60 236.9 281 49.1
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 1.9e-60 236.9 281 49.1
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.9e-60 236.9 281 51.6
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 7.4e-60 235.0 278 48.2
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 9.6e-60 234.6 210 55.2
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 2.1e-59 233.4 278 47.8
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 2.8e-59 233.0 213 57.3
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 4.8e-59 232.3 279 48.4
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 4.8e-59 232.3 215 59.1
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 4.8e-59 232.3 280 46.4
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 1.1e-58 231.1 279 48.7
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 2.6e-57 226.5 281 47.0
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 5.8e-57 225.3 279 48.0
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 3.8e-56 222.6 276 47.1
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 4.6e-54 215.7 282 47.2
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 1.8e-53 213.8 235 46.8
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 1.9e-52 210.3 277 44.8
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 7.4e-52 208.4 278 45.0
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 2.1e-51 206.8 206 51.5
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 2.8e-51 206.5 278 45.0
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 1.8e-50 203.8 252 46.8
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 2.4e-50 203.4 211 51.2
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 6.9e-50 201.8 200 52.0
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 1.2e-49 201.1 202 53.0
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 4.5e-49 199.1 207 50.2
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 7.6e-49 198.4 275 42.2
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 1.6e-46 190.7 207 50.7
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 7.4e-44 181.8 253 41.5
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 3.7e-43 179.5 253 41.1
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 9.0e-42 174.9 148 59.5
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 1.5e-41 174.1 206 48.1
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 3.4e-41 172.9 243 42.8
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 3.4e-41 172.9 161 55.9
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.9e-39 167.2 193 53.4
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 3.1e-26 123.2 214 34.1
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 3.5e-25 119.8 121 50.4
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 3.5e-25 119.8 233 35.6
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 1.7e-19 100.9 199 35.2
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 3.1e-18 96.7 70 67.1
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 5.0e-16 89.4 220 29.1
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.7e-14 83.6 74 55.4
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 3.4e-12 76.6 61 57.4
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 1.7e-11 74.3 150 34.7
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 8.3e-11 72.0 132 34.1
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 1.2e-09 68.2 87 43.7
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 3.5e-09 66.6 87 42.5


User provided reference genes

Program Settings