Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22617 Vaccinium macrocarpon HOM05D005184 ORTHO05D006222 7.8e-39 163.3 82 100.0
Rhsim12G0048500 Rhododendron simsii HOM05D005184 ORTHO05D006222 6.0e-23 110.5 55 98.2
Actinidia27771 Actinidia chinensis HOM05D005184 ORTHO05D006222 1.1e-21 106.3 57 93.0
Solyc04g025670.4 Solanum lycopersicum HOM05D005184 ORTHO05D006222 2.1e-20 102.1 60 86.7
CiPaw.05G149300 Carya illinoinensis HOM05D005184 ORTHO05D006222 2.8e-20 101.7 57 89.5
COL.COLO4_19542 Corchorus olitorius HOM05D005184 ORTHO05D006222 3.7e-20 101.3 57 87.7
FAN07G0314 Fragaria x ananassa HOM05D005184 ORTHO05D006222 3.7e-20 101.3 57 87.7
FAN17G0007 Fragaria x ananassa HOM05D005184 ORTHO05D006222 3.7e-20 101.3 57 87.7
FAN22G1244 Fragaria x ananassa HOM05D005184 ORTHO05D006222 3.7e-20 101.3 57 87.7
HanXRQChr04g0103681 Helianthus annuus HOM05D005184 ORTHO05D006222 3.7e-20 101.3 57 89.5
RcHm_v2.0_Chr4g0444381 Rosa chinensis HOM05D005184 ORTHO05D006222 3.7e-20 101.3 57 87.7
CsaV3_5G031800 Cucumis sativus L. HOM05D005184 ORTHO05D006222 4.8e-20 100.9 57 89.5
Gohir.A01G139200 Gossypium hirsutum HOM05D005184 ORTHO05D006222 4.8e-20 100.9 57 89.5
Gohir.D01G129700 Gossypium hirsutum HOM05D005184 ORTHO05D006222 4.8e-20 100.9 57 89.5
Gorai.002G161300 Gossypium raimondii HOM05D005184 ORTHO05D006222 4.8e-20 100.9 57 89.5
TWI18G1303 Tripterygium wilfordii HOM05D005184 ORTHO05D006222 4.8e-20 100.9 57 87.7
MD13G1087800 Malus domestica HOM05D005184 ORTHO05D006222 6.2e-20 100.5 57 87.7
MD16G1088100 Malus domestica HOM05D005184 ORTHO05D006222 6.2e-20 100.5 57 87.7
Sc04g0008930 Simmondsia chinensis HOM05D005184 ORTHO05D006222 6.2e-20 100.5 57 87.7
CSS0046251 Camellia sinensis var. sinensis HOM05D005184 ORTHO05D006222 8.1e-20 100.1 58 86.2
Cfa009129 Carpinus fangiana HOM05D005184 ORTHO05D006222 8.1e-20 100.1 57 87.7
Thecc.02G243600 Theobroma cacao HOM05D005184 ORTHO05D006222 8.1e-20 100.1 57 87.7
MELO3C012019.2 Cucumis melo HOM05D005184 ORTHO05D006222 1.1e-19 99.8 54 90.7
FvH4_4g34930 Fragaria vesca HOM05D005184 ORTHO05D006222 1.1e-19 99.8 57 86.0
FAN12G2936 Fragaria x ananassa HOM05D005184 ORTHO05D006222 1.1e-19 99.8 57 86.0
Cc11_g14330 Coffea canephora HOM05D005184 ORTHO05D006222 1.4e-19 99.4 57 87.7
Manes.01G197300 Manihot esculenta HOM05D005184 ORTHO05D006222 1.8e-19 99.0 57 86.0
Nitab4.5_0000031g0060 Nicotiana tabacum HOM05D005184 ORTHO05D006222 1.8e-19 99.0 69 75.4
Ciclev10032867m.g Citrus clementina HOM05D005184 ORTHO05D006222 2.4e-19 98.6 56 87.5
Potri.008G146200 Populus trichocarpa HOM05D005184 ORTHO05D006222 3.1e-19 98.2 57 86.0
Prupe.1G258600 Prunus persica HOM05D005184 ORTHO05D006222 3.1e-19 98.2 60 81.7
CSS0033197 Camellia sinensis var. sinensis HOM05D005184 ORTHO05D006222 4.0e-19 97.8 57 86.0
Nitab4.5_0000925g0110 Nicotiana tabacum HOM05D005184 ORTHO05D006222 4.0e-19 97.8 73 71.2
Cpa.g.sc5.359 Carica papaya HOM05D005184 ORTHO05D006222 5.3e-19 97.4 55 85.5
Lsat_1_v5_gn_4_6340 Lactuca sativa HOM05D005184 ORTHO05D006222 5.3e-19 97.4 57 86.0
Phvul.003G054400 Phaseolus vulgaris HOM05D005184 ORTHO05D006222 5.3e-19 97.4 53 90.6
ATR1149G050 Amborella trichopoda HOM05D005184 ORTHO05D006222 9.0e-19 96.7 57 86.0
Duzib268G0446 Durio zibethinus HOM05D005184 ORTHO05D006222 9.0e-19 96.7 57 86.0
MSTRG.614 Avicennia marina HOM05D005184 ORTHO05D006222 1.2e-18 96.3 57 84.2
Haze_12160 Corylus avellana HOM05D005184 ORTHO05D006222 1.2e-18 96.3 57 84.2
Potri.010G095601 Populus trichocarpa HOM05D005184 ORTHO05D006222 1.2e-18 96.3 57 84.2
Nn4g22873 Nelumbo nucifera HOM05D005184 ORTHO05D006222 1.5e-18 95.9 53 86.8
SGA_v2.0_scaffold166G38348 Striga asiatica HOM05D005184 ORTHO05D006222 2.0e-18 95.5 52 88.5
GSVIVG01020163001 Vitis vinifera HOM05D005184 ORTHO05D006222 2.0e-18 95.5 57 84.2
Atru.chr11.1971 Acer truncatum HOM05D005184 ORTHO05D006222 2.6e-18 95.1 57 84.2
Lj3A1049G57 Lonicera japonica HOM05D005184 ORTHO05D006222 2.6e-18 95.1 52 90.4
DCAR_007099 Daucus carota HOM05D005184 ORTHO05D006222 4.5e-18 94.4 57 84.2
Migut.E00145 Erythranthe guttata HOM05D005184 ORTHO05D006222 5.8e-18 94.0 54 83.3
Hund05960 Selenicereus undatus HOM05D005184 ORTHO05D006222 5.8e-18 94.0 55 83.6
HPP92_015265 Vanilla planifolia HOM05D000076 ORTHO05D002949 5.8e-18 94.0 52 88.5
arahy.Tifrunner.gnm1.ann1.G4BVC6 Arachis hypogaea HOM05D005184 ORTHO05D006222 1.0e-17 93.2 55 83.6
arahy.Tifrunner.gnm1.ann1.GIV1JF Arachis hypogaea HOM05D005184 ORTHO05D006222 1.0e-17 93.2 55 83.6
AUR62005318 Chenopodium quinoa HOM05D005184 ORTHO05D006222 1.0e-17 93.2 57 80.7
Lj4g0016473 Lotus japonicus HOM05D005184 ORTHO05D006222 1.3e-17 92.8 53 84.9
Lalb_Chr11g0071121 Lupinus albus HOM05D005184 ORTHO05D006222 1.3e-17 92.8 53 84.9
Oeu039485.1 Olea europaea HOM05D005184 ORTHO05D006222 2.2e-17 92.0 57 80.7
Mapoly0065s0085 Marchantia polymorpha HOM05D005184 ORTHO05D006222 2.9e-17 91.7 55 80.0
PGR119G0379 Punica granatum HOM05D005184 ORTHO05D006222 2.9e-17 91.7 57 78.9
QL03p062286 Quercus lobata HOM05D005184 ORTHO05D006222 2.9e-17 91.7 56 80.4
VMungo0251G1371 Vigna mungo HOM05D005184 ORTHO05D006222 3.8e-17 91.3 52 84.6
Oeu040755.2 Olea europaea HOM05D005184 ORTHO05D006222 4.9e-17 90.9 57 78.9
Sabra10G0068200 Salix brachista HOM05D005184 ORTHO05D006222 4.9e-17 90.9 53 83.0
Ca_22770_v3 Cicer arietinum L. HOM05D005184 ORTHO05D006222 1.1e-16 89.7 53 83.0
Glyma.08G290400 Glycine max HOM05D005184 ORTHO05D006222 1.1e-16 89.7 52 86.5
Medtr8g063230 Medicago truncatula HOM05D005184 ORTHO05D006222 1.1e-16 89.7 53 83.0
CDE06G1803 Ceratophyllum demersum HOM05D005184 ORTHO05D006222 1.4e-16 89.4 50 86.0
PSO017G3562 Papaver somniferum HOM05D005184 ORTHO05D006222 1.4e-16 89.4 53 81.1
PSO478G1620 Papaver somniferum HOM05D005184 ORTHO05D006222 1.4e-16 89.4 53 81.1
EL10Ac6g13619 Beta vulgaris HOM05D005184 ORTHO05D006222 2.5e-16 88.6 57 78.9
Glyma.18G133800 Glycine max HOM05D005184 ORTHO05D006222 2.5e-16 88.6 52 84.6
CSS0034024 Camellia sinensis var. sinensis HOM05D005184 ORTHO05D006222 4.2e-16 87.8 57 75.4
CSS0049337 Camellia sinensis var. sinensis HOM05D005184 ORTHO05D006222 4.2e-16 87.8 57 75.4
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 4.2e-16 87.8 52 80.8
ECA234G0428 Erigeron canadensis HOM05D005184 ORTHO05D003386 4.2e-16 87.8 50 84.0
Psat4g125480 Pisum sativum HOM05D005184 ORTHO05D006222 4.2e-16 87.8 53 81.1
RcHm_v2.0_Chr5g0030111 Rosa chinensis HOM05D005184 ORTHO05D006222 1.2e-15 86.3 46 89.1
TPR.G32980 Trifolium pratense HOM05D005184 ORTHO05D006222 1.2e-15 86.3 52 80.8
CANSAT01G1514 Cannabis sativa HOM05D005184 ORTHO05D006222 1.6e-15 85.9 57 75.4
Eucgr.B02549 Eucalyptus grandis HOM05D005184 ORTHO05D006222 1.6e-15 85.9 52 78.8
Pp3c1_7410 Physcomitrium patens HOM05D005184 ORTHO05D006222 1.6e-15 85.9 53 77.4
TAR374G1061 Trochodendron aralioides HOM05D005184 ORTHO05D006222 1.0e-14 83.2 57 71.9
Aqoxy3G03072 Aquilegia oxysepala HOM05D005184 ORTHO05D006222 1.3e-14 82.8 50 80.0
Medtr8g461280 Medicago truncatula HOM05D005184 ORTHO05D006222 1.8e-14 82.4 50 78.0
Peaxi162Scf00792g00021 Petunia axillaris HOM05D005184 ORTHO05D006222 1.8e-14 82.4 66 62.1
Zm00001eb254250 Zea mays HOM05D005184 ORTHO05D006222 3.0e-14 81.6 56 71.4
Pp3c7_23840 Physcomitrium patens HOM05D005184 ORTHO05D006222 3.9e-14 81.3 57 71.9
SMO117G0191 Selaginella moellendorffii HOM05D005184 ORTHO05D006222 6.7e-14 80.5 55 69.1
Zm00001eb194690 Zea mays HOM05D005184 ORTHO05D006222 8.7e-14 80.1 52 75.0
ClCG05G025100 Citrullus lanatus HOM05D005184 ORTHO05D006222 1.1e-13 79.7 41 92.7
Os02g0741900 Oryza sativa ssp. japonica HOM05D005184 ORTHO05D006222 2.5e-13 78.6 52 75.0
THA.LOC104808902 Tarenaya hassleriana HOM05D005184 ORTHO05D006222 3.3e-13 78.2 53 73.6
THA.LOC104822060 Tarenaya hassleriana HOM05D005184 ORTHO05D006222 4.3e-13 77.8 50 76.0
CSS0002866 Camellia sinensis var. sinensis HOM05D005184 ORTHO05D006222 4.8e-12 74.3 42 78.6
TAR622G1169 Trochodendron aralioides HOM05D005184 ORTHO05D006222 1.1e-11 73.2 42 81.0
unitig_749.g13268 Utricularia gibba HOM05D005184 ORTHO05D006222 4.0e-11 71.2 46 78.3
Aa31LG7G7840 Aethionema arabicum HOM05D005184 ORTHO05D006222 6.9e-11 70.5 50 68.0
AL1G37810 Arabidopsis lyrata HOM05D005184 ORTHO05D006222 6.9e-11 70.5 50 68.0
AT1G24050 Arabidopsis thaliana HOM05D005184 ORTHO05D006222 6.9e-11 70.5 50 68.0
BraA07t29118Z Brassica rapa HOM05D005184 ORTHO05D006222 6.9e-11 70.5 50 68.0
Thhalv10009785m.g Eutrema salsugineum HOM05D005184 ORTHO05D006222 6.9e-11 70.5 50 68.0
Sp1g21380 Schrenkiella parvula HOM05D005184 ORTHO05D006222 6.9e-11 70.5 50 68.0
BcaB03g14122 Brassica carinata HOM05D005184 ORTHO05D006222 1.2e-10 69.7 50 68.0
BcaC05g26302 Brassica carinata HOM05D005184 ORTHO05D006222 1.2e-10 69.7 50 68.0
BolC5t31020H Brassica oleracea HOM05D005184 ORTHO05D006222 1.2e-10 69.7 50 68.0
BcaB07g32379 Brassica carinata HOM05D005184 ORTHO05D006222 2.0e-10 68.9 50 68.0
Carub.0001s2347 Capsella rubella HOM05D005184 ORTHO05D006222 2.0e-10 68.9 50 66.0
C07p20080 Brassica napus HOM05D005184 ORTHO05D006222 2.6e-10 68.6 49 67.3
BolC7t42528H Brassica oleracea HOM05D005184 ORTHO05D006222 2.6e-10 68.6 49 67.3
BraA09t39575Z Brassica rapa HOM05D005184 ORTHO05D006222 4.5e-10 67.8 50 66.0
CBR_g30798 Chara braunii HOM05D005184 ORTHO05D006222 2.2e-09 65.5 52 61.5
CBR_g30806 Chara braunii HOM05D005184 ORTHO05D006222 2.2e-09 65.5 52 61.5
CSS0009826 Camellia sinensis var. sinensis HOM05D005184 ORTHO05D006222 3.8e-09 64.7 40 72.5
Carub.0002s1692 Capsella rubella HOM05D005184 ORTHO05D006222 2.1e-07 58.9 50 58.0
C05p23190 Brassica napus HOM05D001690 ORTHO05D009096 4.6e-07 57.8 42 64.3
AL2G29520 Arabidopsis lyrata HOM05D005184 ORTHO05D006222 7.9e-07 57.0 50 56.0
A07p13470 Brassica napus HOM05D005184 ORTHO05D006222 7.9e-07 57.0 60 51.7
A09p40800 Brassica napus HOM05D001690 ORTHO05D009096 7.9e-07 57.0 42 64.3
Thhalv10019170m.g Eutrema salsugineum HOM05D005184 ORTHO05D006222 7.9e-07 57.0 58 51.7
AagrBONN_evm.TU.Sc2ySwM_344.3206 Anthoceros agrestis HOM05D005184 ORTHO05D006222 3.0e-06 55.1 42 57.1
A02p16400 Brassica napus HOM05D005184 ORTHO05D006222 3.0e-06 55.1 50 50.0
BraA02t06699Z Brassica rapa HOM05D005184 ORTHO05D006222 3.0e-06 55.1 50 50.0
Sp5g25350 Schrenkiella parvula HOM05D005184 ORTHO05D006222 3.0e-06 55.1 57 49.1


User provided reference genes

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