Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22601 Vaccinium macrocarpon HOM05D003856 ORTHO05D426869 1.3e-61 239.6 127 100.0
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 1.1e-07 60.5 90 50.0
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 9.4e-07 57.4 87 49.4
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 1.2e-06 57.0 89 46.1
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 1.2e-06 57.0 89 48.3
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 1.2e-06 57.0 89 48.3
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 1.6e-06 56.6 90 48.9
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 1.6e-06 56.6 90 48.9
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 1.6e-06 56.6 89 49.4
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 1.6e-06 56.6 97 45.4
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 2.1e-06 56.2 87 50.6
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 2.1e-06 56.2 87 50.6
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 2.1e-06 56.2 90 48.9
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 2.1e-06 56.2 90 48.9
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 2.1e-06 56.2 90 48.9
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 2.1e-06 56.2 90 48.9
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 2.1e-06 56.2 90 48.9
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 2.1e-06 56.2 90 48.9
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 2.1e-06 56.2 90 48.9
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 2.1e-06 56.2 90 48.9
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 2.1e-06 56.2 90 48.9
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 2.1e-06 56.2 90 47.8
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 2.1e-06 56.2 90 48.9
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.7e-06 55.8 90 47.8
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 2.7e-06 55.8 90 50.0
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 2.7e-06 55.8 90 47.8
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 2.7e-06 55.8 87 48.3
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 2.7e-06 55.8 87 49.4
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 2.7e-06 55.8 90 47.8
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 2.7e-06 55.8 90 47.8
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 3.6e-06 55.5 90 48.9
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 3.6e-06 55.5 89 48.3
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 3.6e-06 55.5 87 48.3
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 3.6e-06 55.5 89 47.2
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 3.6e-06 55.5 87 49.4
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 3.6e-06 55.5 89 47.2
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 3.6e-06 55.5 87 48.3
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 3.6e-06 55.5 90 47.8
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 4.7e-06 55.1 89 47.2
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 4.7e-06 55.1 90 47.8
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 4.7e-06 55.1 87 48.3
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 6.1e-06 54.7 87 47.1
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 6.1e-06 54.7 90 46.7
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 6.1e-06 54.7 90 46.7
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 6.1e-06 54.7 90 46.7
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 6.1e-06 54.7 87 48.3
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 6.1e-06 54.7 89 43.8
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 7.9e-06 54.3 89 48.3
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 7.9e-06 54.3 89 48.3
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 7.9e-06 54.3 87 48.3
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 7.9e-06 54.3 87 50.6
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 7.9e-06 54.3 89 43.8
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 7.9e-06 54.3 89 47.2
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 7.9e-06 54.3 89 43.8
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 7.9e-06 54.3 87 48.3
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 7.9e-06 54.3 89 47.2
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 7.9e-06 54.3 90 44.4
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 7.9e-06 54.3 90 46.7
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 7.9e-06 54.3 89 46.1


User provided reference genes

Program Settings