Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22515 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 1.1e-77 293.1 139 100.0
vmacro22516 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 2.9e-62 241.9 126 93.7
Rhsim01G0170500 Rhododendron simsii HOM05D007041 ORTHO05D008036 2.7e-47 192.2 129 76.7
Rhsim01G0170200 Rhododendron simsii HOM05D007041 ORTHO05D008036 8.9e-43 177.2 123 71.5
vmacro22517 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 5.8e-42 174.5 126 72.2
Rhsim07G0006100 Rhododendron simsii HOM05D000337 ORTHO05D000297 7.3e-21 104.4 131 47.3
CSS0039531 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 1.4e-19 100.1 91 54.9
Actinidia28494 Actinidia chinensis HOM05D000017 ORTHO05D008036 2.2e-17 92.8 86 55.8
Prupe.2G184300 Prunus persica HOM05D007041 ORTHO05D008036 3.8e-17 92.0 136 40.4
TPR.G7661 Trifolium pratense HOM05D007041 ORTHO05D008036 6.0e-15 84.7 116 41.4
TAR629G2489 Trochodendron aralioides HOM05D007041 ORTHO05D008036 6.0e-15 84.7 116 43.1
Thecc.01G346300 Theobroma cacao HOM05D007041 ORTHO05D008036 3.9e-14 82.0 114 39.5
Oeu007854.1 Olea europaea HOM05D007041 ORTHO05D008036 6.6e-14 81.3 127 39.4
FAN10G2988 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.1e-13 80.5 133 38.3
EL10Ac1g00306 Beta vulgaris HOM05D007041 ORTHO05D008036 2.5e-13 79.3 102 42.2
Oeu007855.1 Olea europaea HOM05D007041 ORTHO05D008036 7.3e-13 77.8 106 40.6
RcHm_v2.0_Chr1g0358991 Rosa chinensis HOM05D007041 ORTHO05D008036 9.6e-13 77.4 118 39.0
COL.COLO4_06320 Corchorus olitorius HOM05D007041 ORTHO05D008036 1.3e-12 77.0 121 36.4
FAN10G1361 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.3e-12 77.0 126 38.1
Manes.02G012400 Manihot esculenta HOM05D007041 ORTHO05D008036 1.3e-12 77.0 125 36.8
Potri.001G094000 Populus trichocarpa HOM05D007041 ORTHO05D008036 2.1e-12 76.3 110 40.0
Glyma.16G026800 Glycine max HOM05D007041 ORTHO05D008036 2.8e-12 75.9 107 39.3
Manes.02G012350 Manihot esculenta HOM05D007041 ORTHO05D008036 2.8e-12 75.9 125 36.8
FAN03G1744 Fragaria x ananassa HOM05D007041 ORTHO05D008036 4.8e-12 75.1 127 37.8
FAN06G2039 Fragaria x ananassa HOM05D007041 ORTHO05D008036 4.8e-12 75.1 126 38.1
Nitab4.5_0007594g0010 Nicotiana tabacum HOM05D007041 ORTHO05D008036 4.8e-12 75.1 122 41.8
TAR636G2915 Trochodendron aralioides HOM05D007041 ORTHO05D008036 4.8e-12 75.1 113 41.6
CSS0019600 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 8.1e-12 74.3 105 40.0
Lalb_Chr17g0342361 Lupinus albus HOM05D007041 ORTHO05D008036 8.1e-12 74.3 102 34.3
Lj3g0003817 Lotus japonicus HOM05D007041 ORTHO05D008036 1.1e-11 73.9 113 36.3
FvH4_7g16050 Fragaria vesca HOM05D007041 ORTHO05D008036 1.4e-11 73.6 126 38.1
Glyma.07G057800 Glycine max HOM05D007041 ORTHO05D008036 1.8e-11 73.2 97 37.1
Gohir.D08G147100 Gossypium hirsutum HOM05D007041 ORTHO05D008036 1.8e-11 73.2 103 40.8
Gorai.004G152600 Gossypium raimondii HOM05D007041 ORTHO05D008036 1.8e-11 73.2 103 40.8
Nitab4.5_0000305g0050 Nicotiana tabacum HOM05D007041 ORTHO05D008036 1.8e-11 73.2 127 39.4
Potri.003G137600 Populus trichocarpa HOM05D007041 ORTHO05D008036 3.1e-11 72.4 93 44.1
CSS0049473 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 4.0e-11 72.0 106 41.5
QL02p031389 Quercus lobata HOM05D007041 ORTHO05D008036 4.0e-11 72.0 122 36.1
VMungo0331G1585 Vigna mungo HOM05D007041 ORTHO05D008036 5.3e-11 71.6 88 39.8
arahy.Tifrunner.gnm1.ann1.LKBY4F Arachis hypogaea HOM05D007041 ORTHO05D008036 1.2e-10 70.5 83 41.0
Manes.05G025400 Manihot esculenta HOM05D007041 ORTHO05D008036 1.2e-10 70.5 109 36.7
Sabra01G0069900 Salix brachista HOM05D007041 ORTHO05D008036 1.2e-10 70.5 107 43.0
arahy.Tifrunner.gnm1.ann1.JU2T19 Arachis hypogaea HOM05D007041 ORTHO05D008036 2.6e-10 69.3 88 40.9
CiPaw.12G084900 Carya illinoinensis HOM05D007041 ORTHO05D008036 3.4e-10 68.9 45 62.2
Migut.B01841 Erythranthe guttata HOM05D007041 ORTHO05D008036 3.4e-10 68.9 99 39.4
Medtr8g027915 Medicago truncatula HOM05D007041 ORTHO05D008036 5.8e-10 68.2 93 37.6
Nn1g01816 Nelumbo nucifera HOM05D007041 ORTHO05D008036 5.8e-10 68.2 99 40.4
SalBow3G2736 Salvia bowleyana HOM05D007041 ORTHO05D008036 5.8e-10 68.2 99 36.4
Atru.chr5.628 Acer truncatum HOM05D007041 ORTHO05D008036 9.9e-10 67.4 102 36.3
Peaxi162Scf00843g00001 Petunia axillaris HOM05D007041 ORTHO05D008036 9.9e-10 67.4 86 43.0
Thecc.03G293400 Theobroma cacao HOM05D007041 ORTHO05D008036 9.9e-10 67.4 106 35.8
Lsat_1_v5_gn_7_2180 Lactuca sativa HOM05D007041 ORTHO05D008036 1.7e-09 66.6 65 43.1
CANSAT56G1227 Cannabis sativa HOM05D007041 ORTHO05D008036 2.2e-09 66.2 123 35.8
MD07G1146000 Malus domestica HOM05D007041 ORTHO05D008036 2.2e-09 66.2 111 41.4
Medtr8g027905 Medicago truncatula HOM05D001941 ORTHO05D008036 2.2e-09 66.2 98 37.8
CiPaw.02G039100 Carya illinoinensis HOM05D007041 ORTHO05D008036 2.9e-09 65.9 56 50.0
Glyma.19G254100 Glycine max HOM05D007041 ORTHO05D008036 2.9e-09 65.9 104 40.4
Gohir.A07G139300 Gossypium hirsutum HOM05D007041 ORTHO05D008036 3.8e-09 65.5 82 37.8
FAN06G3979 Fragaria x ananassa HOM05D007041 ORTHO05D008036 4.9e-09 65.1 59 52.5
Prupe.5G115500 Prunus persica HOM05D007041 ORTHO05D008036 1.1e-08 63.9 31 74.2
A09p53730 Brassica napus HOM05D007041 ORTHO05D008036 1.4e-08 63.5 91 38.5
BraA09t40795Z Brassica rapa HOM05D007041 ORTHO05D008036 1.4e-08 63.5 91 38.5
Phvul.010G111500 Phaseolus vulgaris HOM05D007041 ORTHO05D008036 1.4e-08 63.5 92 35.9
AL5G44060 Arabidopsis lyrata HOM05D007041 ORTHO05D008036 2.4e-08 62.8 100 38.0
Cpa.g.sc2382.1 Carica papaya HOM05D007041 ORTHO05D008036 2.4e-08 62.8 70 45.7
CiPaw.01G073300 Carya illinoinensis HOM05D007041 ORTHO05D008036 2.4e-08 62.8 48 56.2
ECA236G3839 Erigeron canadensis HOM05D007041 ORTHO05D008036 2.4e-08 62.8 123 30.9
Nn3g19073 Nelumbo nucifera HOM05D007041 ORTHO05D008036 2.4e-08 62.8 46 58.7
C08p36510 Brassica napus HOM05D007041 ORTHO05D008036 3.2e-08 62.4 91 40.7
BolC8t51234H Brassica oleracea HOM05D007041 ORTHO05D008036 3.2e-08 62.4 91 40.7
Gohir.D07G144400 Gossypium hirsutum HOM05D007041 ORTHO05D008036 3.2e-08 62.4 82 36.6
Gorai.001G156400 Gossypium raimondii HOM05D007041 ORTHO05D008036 7.1e-08 61.2 82 36.6
Sp5g01745 Schrenkiella parvula HOM05D007041 ORTHO05D008036 7.1e-08 61.2 34 70.6
CsaV3_3G008250 Cucumis sativus L. HOM05D007041 ORTHO05D008036 9.3e-08 60.8 48 60.4
Gohir.A12G234950 Gossypium hirsutum HOM05D007041 ORTHO05D008036 9.3e-08 60.8 104 34.6
Manes.01G248300 Manihot esculenta HOM05D007041 ORTHO05D008036 9.3e-08 60.8 99 35.4
Carub.0005s2835 Capsella rubella HOM05D007041 ORTHO05D008036 1.2e-07 60.5 43 60.5
Ca_09497_v3 Cicer arietinum L. HOM05D007041 ORTHO05D008036 1.2e-07 60.5 92 33.7
Lj1g0010364 Lotus japonicus HOM05D007041 ORTHO05D008036 1.2e-07 60.5 96 35.4
Sabra14G0070100 Salix brachista HOM05D007041 ORTHO05D008036 1.2e-07 60.5 127 29.1
Sc01g0010130 Simmondsia chinensis HOM05D007041 ORTHO05D008036 1.2e-07 60.5 104 34.6
AT3G61660 Arabidopsis thaliana HOM05D007041 ORTHO05D008036 1.6e-07 60.1 34 67.6
CARHR171970 Cardamine hirsuta HOM05D007041 ORTHO05D008036 1.6e-07 60.1 34 67.6
Gohir.D12G236050 Gossypium hirsutum HOM05D007041 ORTHO05D008036 1.6e-07 60.1 40 55.0
Gorai.008G252800 Gossypium raimondii HOM05D007041 ORTHO05D008036 1.6e-07 60.1 40 55.0
HPP92_007621 Vanilla planifolia HOM05D007041 ORTHO05D008036 1.6e-07 60.1 70 40.0
Haze_08658 Corylus avellana HOM05D007041 ORTHO05D008036 2.1e-07 59.7 36 63.9
MELO3C006045.2 Cucumis melo HOM05D007041 ORTHO05D008036 2.1e-07 59.7 46 63.0
Thhalv10006386m.g Eutrema salsugineum HOM05D007041 ORTHO05D008036 2.7e-07 59.3 34 67.6
RcHm_v2.0_Chr7g0195411 Rosa chinensis HOM05D017100 ORTHO05D008036 3.5e-07 58.9 49 53.1
Medtr8g027305 Medicago truncatula HOM05D007041 ORTHO05D008036 4.6e-07 58.5 54 50.0
Sed0010994 Sechium edule HOM05D007041 ORTHO05D008036 6.0e-07 58.2 29 79.3
FAN04G1004 Fragaria x ananassa HOM05D017100 ORTHO05D008036 1.0e-06 57.4 63 39.7
FAN04G2843 Fragaria x ananassa HOM05D017100 ORTHO05D008036 1.0e-06 57.4 63 39.7
Potri.002G168300 Populus trichocarpa HOM05D007041 ORTHO05D008036 1.0e-06 57.4 70 44.3
arahy.Tifrunner.gnm1.ann1.3XXF02 Arachis hypogaea HOM05D007041 ORTHO05D008036 1.3e-06 57.0 42 52.4
AUR62023489 Chenopodium quinoa HOM05D007041 ORTHO05D008036 1.3e-06 57.0 42 61.9
FvH4_5g04090 Fragaria vesca HOM05D017100 ORTHO05D008036 1.7e-06 56.6 30 70.0
FAN13G1599 Fragaria x ananassa HOM05D017100 ORTHO05D008036 1.7e-06 56.6 30 70.0
FAN18G0435 Fragaria x ananassa HOM05D017100 ORTHO05D008036 1.7e-06 56.6 30 70.0
FAN18G2618 Fragaria x ananassa HOM05D017100 ORTHO05D008036 1.7e-06 56.6 30 70.0
Potri.014G095600 Populus trichocarpa HOM05D007041 ORTHO05D008036 1.7e-06 56.6 44 54.5
TPR.G7659 Trifolium pratense HOM05D007041 ORTHO05D008036 1.7e-06 56.6 119 34.5
Zm00001eb310140 Zea mays HOM05D007041 ORTHO05D008036 1.7e-06 56.6 39 53.8
Zm00001eb441140 Zea mays HOM05D007041 ORTHO05D008036 1.7e-06 56.6 39 53.8
SGA_v2.0_scaffold11G05722 Striga asiatica HOM05D007041 ORTHO05D008036 2.3e-06 56.2 31 64.5
Lalb_Chr18g0044291 Lupinus albus HOM05D007041 ORTHO05D008036 3.0e-06 55.8 88 34.1
BcaC04g19548 Brassica carinata HOM05D010682 ORTHO05D012785 3.9e-06 55.5 57 45.6
BolC9t58317H Brassica oleracea HOM05D010682 ORTHO05D012785 3.9e-06 55.5 57 45.6
Sabra02G0143600 Salix brachista HOM05D007041 ORTHO05D008036 3.9e-06 55.5 86 33.7
A05p01410 Brassica napus HOM05D010682 ORTHO05D012785 5.1e-06 55.1 57 45.6
BraA05t19138Z Brassica rapa HOM05D010682 ORTHO05D012785 5.1e-06 55.1 57 45.6
FAN08G3467 Fragaria x ananassa HOM05D017100 ORTHO05D008036 5.1e-06 55.1 44 50.0
Nn2g15118 Nelumbo nucifera HOM05D007041 ORTHO05D008036 5.1e-06 55.1 96 35.4
PGSC0003DMG400012302 Solanum tuberosum HOM05D007041 ORTHO05D008036 5.1e-06 55.1 49 49.0
BcaC02g12691 Brassica carinata HOM05D010682 ORTHO05D012785 6.6e-06 54.7 57 45.6
C04p01580 Brassica napus HOM05D010682 ORTHO05D012785 6.6e-06 54.7 57 45.6
BolC4t21810H Brassica oleracea HOM05D010682 ORTHO05D012785 6.6e-06 54.7 57 45.6
unitig_52.g17065 Utricularia gibba HOM05D007041 ORTHO05D008036 6.6e-06 54.7 46 47.8
HPP92_005512 Vanilla planifolia HOM05D007041 ORTHO05D008036 6.6e-06 54.7 38 57.9
Gohir.A11G095550 Gossypium hirsutum HOM05D066925 ORTHO05D047563 8.7e-06 54.3 115 33.9
Oeu009948.1 Olea europaea HOM05D007041 ORTHO05D008036 8.7e-06 54.3 41 53.7


User provided reference genes

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