Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 1.6e-158 562.8 288 99.0
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 1.6e-158 562.8 288 100.0
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 6.1e-62 241.9 284 54.9
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 1.7e-59 233.8 197 64.0
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 1.7e-59 233.8 282 48.6
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 9.4e-55 218.0 152 72.4
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 9.4e-55 218.0 152 72.4
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 1.4e-50 204.1 178 61.2
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 7.7e-49 198.4 170 63.5
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 1.3e-48 197.6 166 60.8
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 3.2e-47 193.0 168 58.9
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 2.7e-46 189.9 280 46.1
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 1.4e-45 187.6 164 57.3
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 6.8e-45 185.3 281 45.2
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 1.2e-44 184.5 289 45.3
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 2.6e-44 183.3 280 45.7
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 5.7e-44 182.2 290 41.4
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 7.5e-44 181.8 283 43.8
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 2.8e-43 179.9 175 57.1
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 4.8e-43 179.1 296 41.2
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 1.8e-42 177.2 168 56.0
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 3.1e-42 176.4 163 55.8
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 4.1e-42 176.0 160 56.9
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 7.0e-42 175.3 163 58.3
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.2e-41 174.5 294 39.8
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 2.0e-41 173.7 169 52.1
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 2.7e-41 173.3 169 53.8
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 5.9e-41 172.2 164 53.0
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 2.2e-40 170.2 169 52.1
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 5.0e-40 169.1 122 72.1
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 8.5e-40 168.3 169 56.2
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 1.9e-39 167.2 161 54.7
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 2.5e-39 166.8 153 59.5
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 3.2e-39 166.4 169 55.0
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 3.2e-39 166.4 277 40.1
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 4.2e-39 166.0 141 56.7
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 4.7e-38 162.5 156 54.5
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 6.1e-38 162.2 283 39.6
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 8.0e-38 161.8 185 50.8
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 1.0e-37 161.4 287 41.8
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 1.4e-37 161.0 163 52.1
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 1.8e-37 160.6 282 41.1
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 1.8e-37 160.6 287 42.2
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 4.0e-37 159.5 158 54.4
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 4.0e-37 159.5 217 41.9
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 6.8e-37 158.7 283 38.9
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 8.8e-37 158.3 153 54.9
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 1.2e-36 157.9 162 55.6
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.2e-36 157.9 161 54.0
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 1.2e-36 157.9 137 59.1
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 9.8e-36 154.8 149 54.4
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 1.3e-35 154.5 135 57.8
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 2.8e-35 153.3 265 38.9
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.9e-35 152.5 169 52.1
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 6.3e-35 152.1 277 41.2
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 8.3e-35 151.8 284 38.7
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.8e-34 150.6 170 52.9
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.8e-34 150.6 161 55.3
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 1.8e-34 150.6 286 39.5
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 1.8e-34 150.6 289 40.1
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 1.8e-34 150.6 172 50.6
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 2.4e-34 150.2 252 39.3
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 4.1e-34 149.4 287 41.5
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 4.5e-33 146.0 160 51.2
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 5.9e-33 145.6 279 38.0
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 2.9e-32 143.3 163 51.5
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 5.0e-32 142.5 101 62.4
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 8.6e-32 141.7 301 38.9
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.5e-31 141.0 114 58.8
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 5.6e-31 139.0 279 37.3
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 1.2e-30 137.9 278 37.4
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 6.1e-30 135.6 278 38.1
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 2.3e-29 133.7 163 46.0
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 3.0e-29 133.3 169 49.1
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 4.0e-29 132.9 288 39.2
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 8.9e-29 131.7 145 49.0
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 1.2e-28 131.3 166 44.0
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 1.2e-28 131.3 95 65.3
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 4.4e-28 129.4 306 34.3
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.7e-27 127.5 227 37.4
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 3.7e-27 126.3 143 44.1
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 3.7e-27 126.3 264 36.4
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 4.9e-27 125.9 167 43.7
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 6.4e-27 125.6 293 32.4
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 1.8e-26 124.0 191 37.7
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 1.8e-26 124.0 246 39.4
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 4.1e-26 122.9 78 69.2
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 2.0e-25 120.6 315 33.0
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 4.6e-25 119.4 163 41.1
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 3.9e-24 116.3 168 38.7
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 2.5e-23 113.6 100 51.0
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 2.5e-23 113.6 100 51.0
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 5.6e-23 112.5 143 43.4
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 9.5e-23 111.7 143 43.4
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 9.5e-23 111.7 143 43.4
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 2.3e-21 107.1 284 35.2
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 2.3e-21 107.1 282 33.7
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 3.1e-21 106.7 170 42.4
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 6.4e-19 99.0 58 72.4
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 8.3e-19 98.6 280 33.9
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 9.5e-15 85.1 155 34.8
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 2.3e-13 80.5 173 32.4
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 5.8e-12 75.9 58 53.4
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 8.3e-11 72.0 245 34.7
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 3.5e-09 66.6 156 31.4
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 3.9e-08 63.2 87 35.6
SMO171G0115 Selaginella moellendorffii HOM05D000227 ORTHO05D004725 9.5e-07 58.5 64 45.3
AT4G00140 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.2e-06 58.2 43 55.8


User provided reference genes

Program Settings