Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22399 Vaccinium macrocarpon HOM05D000445 ORTHO05D000314 2.8e-61 238.4 122 100.0
vmacro22424 Vaccinium macrocarpon HOM05D000445 ORTHO05D000314 2.8e-61 238.4 122 100.0
RhsimMtG0000500 Rhododendron simsii HOM05D000445 ORTHO05D000314 2.5e-17 92.4 59 79.7
Lsat_1_v5_gn_0_15580 Lactuca sativa HOM05D000445 ORTHO05D000314 5.3e-15 84.7 66 62.1
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 5.3e-15 84.7 66 62.1
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 5.3e-15 84.7 66 62.1
Lsat_1_v5_gn_9_42020 Lactuca sativa HOM05D000445 ORTHO05D000314 5.3e-15 84.7 66 62.1
Solyc11g021067.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 9.0e-15 84.0 66 62.1
Solyc00g500147.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.5e-14 83.2 66 62.1
Dinv09726 Davidia involucrata HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 62.1
Dinv29308 Davidia involucrata HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 62.1
Dinv39830 Davidia involucrata HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 62.1
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr00c0585g0576231 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr05g0152341 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr10g0284471 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr11g0336121 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
Hma1.2p1_0192F.1_g083680 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
Hma1.2p1_4210F.1_g338452 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 2.6e-14 82.4 66 60.6
Sed0006678 Sechium edule HOM05D000445 ORTHO05D000314 3.4e-14 82.0 66 60.6
Sed0022464 Sechium edule HOM05D000445 ORTHO05D000314 3.4e-14 82.0 66 60.6
HanXRQChr11g0336101 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-14 81.6 66 60.6
Cfa015164 Carpinus fangiana HOM05D000445 ORTHO05D000314 5.8e-14 81.3 66 60.6
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 5.8e-14 81.3 66 60.6
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 5.8e-14 81.3 66 60.6
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 5.8e-14 81.3 66 60.6
Gohir.A03G137650 Gossypium hirsutum HOM05D000445 ORTHO05D000314 9.9e-14 80.5 66 60.6
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 9.9e-14 80.5 66 60.6
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 9.9e-14 80.5 66 60.6
Gohir.D02G117422 Gossypium hirsutum HOM05D000445 ORTHO05D000314 9.9e-14 80.5 66 60.6
Medtr0689s0010 Medicago truncatula HOM05D000445 ORTHO05D000314 9.9e-14 80.5 66 60.6
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 9.9e-14 80.5 66 59.1
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 9.9e-14 80.5 66 59.1
Peaxi162Scf00000g07210 Petunia axillaris HOM05D000445 ORTHO05D000314 9.9e-14 80.5 66 59.1
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 1.3e-13 80.1 66 60.6
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 1.3e-13 80.1 66 59.1
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 1.3e-13 80.1 66 59.1
RcHm_v2.0_Chr2g0118441 Rosa chinensis HOM05D000445 ORTHO05D000314 1.3e-13 80.1 66 60.6
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-13 80.1 66 59.1
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-13 80.1 66 59.1
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-13 80.1 66 59.1
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-13 80.1 66 59.1
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-13 80.1 66 59.1
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-13 80.1 66 59.1
Sopen02g009120 Solanum pennellii HOM05D000445 ORTHO05D000314 1.3e-13 80.1 66 59.1
PGSC0003DMG400020691 Solanum tuberosum HOM05D000445 ORTHO05D000314 1.3e-13 80.1 66 59.1
Ah.08g222970 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-13 79.7 65 60.0
Ah.10g027230 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-13 79.7 65 60.0
Ah.10g027290 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-13 79.7 65 60.0
Ah.10g027420 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-13 79.7 65 60.0
Ah.10g027670 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-13 79.7 65 60.0
Ah.10g027730 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-13 79.7 65 60.0
CAN.G1738.16 Capsicum annuum HOM05D000445 ORTHO05D000314 1.7e-13 79.7 66 59.1
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 1.7e-13 79.7 66 60.6
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 1.7e-13 79.7 66 60.6
HanXRQChr00c0349g0573991 Helianthus annuus HOM05D000445 ORTHO05D000314 2.2e-13 79.3 64 59.4
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 2.2e-13 79.3 66 59.1
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 2.2e-13 79.3 66 59.1
Nn233s45563 Nelumbo nucifera HOM05D000445 ORTHO05D000314 2.2e-13 79.3 66 59.1
Ah.10g029020 Amaranthus hybridus HOM05D000445 ORTHO05D000314 2.9e-13 79.0 65 60.0
CDE02G2037 Ceratophyllum demersum HOM05D000445 ORTHO05D000314 3.8e-13 78.6 72 54.2
QL01p047310 Quercus lobata HOM05D000445 ORTHO05D000314 3.8e-13 78.6 66 57.6
Solyc09g061465.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.8e-13 78.6 66 57.6
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 6.4e-13 77.8 66 57.6
unitig_91.g26489 Utricularia gibba HOM05D000445 ORTHO05D000314 6.4e-13 77.8 66 57.6
unitig_91.g26516 Utricularia gibba HOM05D000445 ORTHO05D000314 6.4e-13 77.8 66 57.6
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 6.4e-13 77.8 66 57.6
CAN.G1298.14 Capsicum annuum HOM05D000445 ORTHO05D000314 1.1e-12 77.0 66 57.6
CAN.G201.48 Capsicum annuum HOM05D000445 ORTHO05D000314 1.1e-12 77.0 66 57.6
CAN.G838.7 Capsicum annuum HOM05D000445 ORTHO05D000314 1.1e-12 77.0 66 57.6
Lalb_Chr20g0118911 Lupinus albus HOM05D000445 ORTHO05D000314 1.1e-12 77.0 66 57.6
AL2G21840 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 1.4e-12 76.6 66 57.6
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 1.4e-12 76.6 66 57.6
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 1.4e-12 76.6 66 57.6
C04p22510 Brassica napus HOM05D000445 ORTHO05D000314 1.4e-12 76.6 66 57.6
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 1.4e-12 76.6 66 57.6
BolSC37t60782H Brassica oleracea HOM05D000445 ORTHO05D000314 1.4e-12 76.6 66 57.6
BolSC44t60838H Brassica oleracea HOM05D000445 ORTHO05D000314 1.4e-12 76.6 66 57.6
BolSC45t60924H Brassica oleracea HOM05D000445 ORTHO05D000314 1.4e-12 76.6 66 57.6
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 1.4e-12 76.6 66 57.6
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 1.4e-12 76.6 66 57.6
BraSC138t45546Z Brassica rapa HOM05D000445 ORTHO05D000314 1.4e-12 76.6 66 57.6
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 1.4e-12 76.6 66 57.6
CAN.G219.12 Capsicum annuum HOM05D000445 ORTHO05D000314 1.9e-12 76.3 66 56.1
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 2.4e-12 75.9 66 59.1
Nitab4.5_0001783g0140 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.4e-12 75.9 66 56.1
SalBow1G2382 Salvia bowleyana HOM05D000445 ORTHO05D000314 2.4e-12 75.9 60 60.0
SalBow1G2507 Salvia bowleyana HOM05D000445 ORTHO05D000314 2.4e-12 75.9 60 60.0
unitig_87.g27922 Utricularia gibba HOM05D000445 ORTHO05D000314 2.4e-12 75.9 66 57.6
CAN.G1298.21 Capsicum annuum HOM05D000445 ORTHO05D000314 3.2e-12 75.5 66 57.6
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 3.2e-12 75.5 66 56.1
arahy.Tifrunner.gnm1.ann1.30KQQ0 Arachis hypogaea HOM05D000445 ORTHO05D000314 4.2e-12 75.1 66 57.6
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 4.2e-12 75.1 66 57.6
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 4.2e-12 75.1 66 57.6
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 4.2e-12 75.1 66 57.6
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 4.2e-12 75.1 66 57.6
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 4.2e-12 75.1 66 59.1
Sc25g0001980 Simmondsia chinensis HOM05D000445 ORTHO05D000314 4.2e-12 75.1 66 59.1
EL10Ac2g03166 Beta vulgaris HOM05D000445 ORTHO05D000314 5.4e-12 74.7 67 58.2
EL10As15g24112 Beta vulgaris HOM05D000445 ORTHO05D000314 5.4e-12 74.7 67 58.2
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 5.4e-12 74.7 67 58.2
CAN.G1063.2 Capsicum annuum HOM05D000445 ORTHO05D000314 5.4e-12 74.7 65 56.9
Nitab4.5_0023562g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.4e-12 74.7 66 56.1
Peaxi162Scf00060g00008 Petunia axillaris HOM05D000445 ORTHO05D000314 5.4e-12 74.7 67 55.2
Sed0005242 Sechium edule HOM05D000445 ORTHO05D000314 5.4e-12 74.7 66 57.6
Sc25g0002090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 5.4e-12 74.7 66 57.6
Atru.chr8.681 Acer truncatum HOM05D000445 ORTHO05D000314 9.3e-12 73.9 65 56.9
Lalb_Chr07g0191931 Lupinus albus HOM05D000445 ORTHO05D000314 9.3e-12 73.9 66 54.5
Sc02g0005240 Simmondsia chinensis HOM05D000445 ORTHO05D000314 2.1e-11 72.8 66 57.6
CAN.G30.10 Capsicum annuum HOM05D000445 ORTHO05D000314 2.7e-11 72.4 66 56.1
Peaxi162Scf00147g00038 Petunia axillaris HOM05D000445 ORTHO05D000314 3.5e-11 72.0 66 56.1
Lalb_Chr12g0206601 Lupinus albus HOM05D000445 ORTHO05D000314 4.6e-11 71.6 66 54.5
Medtr8g024820 Medicago truncatula HOM05D000445 ORTHO05D000314 4.6e-11 71.6 66 53.0
Nitab4.5_0005100g0080 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.0e-11 71.2 65 53.8
SGA_v2.0_scaffold907G53716 Striga asiatica HOM05D000445 ORTHO05D000314 6.0e-11 71.2 69 58.0
Lj2A1228T85 Lonicera japonica HOM05D000445 ORTHO05D000314 7.9e-11 70.9 61 54.1
Lj2C1238T14 Lonicera japonica HOM05D000445 ORTHO05D000314 7.9e-11 70.9 61 54.1
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 1.8e-10 69.7 65 53.8
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 2.3e-10 69.3 66 53.0
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 2.3e-10 69.3 66 53.0
arahy.Tifrunner.gnm1.ann1.26AK95 Arachis hypogaea HOM05D000445 ORTHO05D000314 3.0e-10 68.9 59 59.3
Solyc04g050840.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 5.1e-10 68.2 57 56.1
Nitab4.5_0002616g0110 Nicotiana tabacum HOM05D000445 ORTHO05D049343 6.7e-10 67.8 66 48.5
Lj2C1224G47 Lonicera japonica HOM05D000445 ORTHO05D000314 8.7e-10 67.4 56 57.1
Medtr5g010700 Medicago truncatula HOM05D000445 ORTHO05D000314 8.7e-10 67.4 66 51.5
Hund01217 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund26852 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund28275 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund29199 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund30073 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund30102 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund30995 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Hund30996 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-09 67.0 62 53.2
Lsat_1_v5_gn_0_41600 Lactuca sativa HOM05D000964 ORTHO05D004047 3.3e-09 65.5 40 75.0
Psat0s2065g0040 Pisum sativum HOM05D000445 ORTHO05D000314 3.3e-09 65.5 62 51.6
Psat5g167960 Pisum sativum HOM05D000445 ORTHO05D000314 3.3e-09 65.5 62 50.0
Psat5g197680 Pisum sativum HOM05D000445 ORTHO05D000314 3.3e-09 65.5 62 51.6
Solyc11g028140.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.3e-09 65.5 55 56.4
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 4.3e-09 65.1 60 53.3
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 7.4e-09 64.3 50 66.0
HanXRQChr00c0392g0574461 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-08 63.5 46 65.2
Ah.10g027860 Amaranthus hybridus HOM05D000445 ORTHO05D009928 2.1e-08 62.8 49 61.2
Ah.10g028320 Amaranthus hybridus HOM05D000445 ORTHO05D009928 2.1e-08 62.8 49 61.2
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 2.8e-08 62.4 66 53.0
Nitab4.5_0018503g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.8e-08 62.4 55 56.4
Peaxi162Scf00913g00110 Petunia axillaris HOM05D000445 ORTHO05D000314 3.7e-08 62.0 53 56.6
Solyc02g014790.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.4e-07 60.1 53 54.7
Hund27459 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.8e-07 59.7 55 52.7
Hund28435 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.8e-07 59.7 55 52.7
Hund28610 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.8e-07 59.7 55 52.7
Hund28854 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.8e-07 59.7 55 52.7
Hund29332 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.8e-07 59.7 55 52.7
Hund29470 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.8e-07 59.7 55 52.7
Hund29892 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.8e-07 59.7 55 52.7
Hund30293 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.8e-07 59.7 55 52.7
Hund30787 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.4e-07 59.3 52 53.8
Actinidia34809 Actinidia chinensis HOM05D000445 ORTHO05D000314 3.1e-07 58.9 67 44.8
Actinidia34935 Actinidia chinensis HOM05D000445 ORTHO05D000314 3.1e-07 58.9 67 44.8
C09p24770 Brassica napus HOM05D000445 ORTHO05D000314 4.0e-07 58.5 40 67.5
Lalb_Chr01g0014981 Lupinus albus HOM05D000445 ORTHO05D000314 9.0e-07 57.4 50 56.0
Nitab4.5_0000010g0110 Nicotiana tabacum HOM05D000445 ORTHO05D000314 3.4e-06 55.5 46 56.5
Oeu054716.1 Olea europaea HOM05D000445 ORTHO05D000314 3.4e-06 55.5 50 54.0
Nitab4.5_0016174g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.5e-06 55.1 43 58.1
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 5.8e-06 54.7 66 45.5
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 7.6e-06 54.3 58 53.4


User provided reference genes

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