Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 3.6e-85 318.2 157 100.0
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 3.7e-77 291.6 152 96.1
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 3.7e-77 291.6 152 96.7
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.6e-75 285.4 143 100.0
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.6e-75 285.4 143 100.0
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 5.8e-75 284.3 144 98.6
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 5.8e-75 284.3 144 98.6
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 2.9e-74 282.0 144 97.9
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 4.8e-69 264.6 146 93.2
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.1e-68 263.5 150 90.7
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.3e-63 246.5 126 98.4
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 3.3e-62 241.9 140 90.0
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 3.3e-62 241.9 140 90.0
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 3.3e-62 241.9 140 90.0
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.8e-60 236.1 126 95.2
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.1e-60 235.3 150 81.3
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 4.1e-60 235.0 138 88.4
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 9.0e-60 233.8 140 87.9
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.0e-58 230.3 140 87.1
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.1e-57 226.9 148 80.4
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.2e-57 224.2 126 89.7
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 2.1e-56 222.6 116 96.6
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 1.9e-54 216.1 126 88.9
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 9.4e-49 197.2 103 96.1
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 9.4e-49 197.2 103 96.1
SHI37614 Sapria himalayana HOM05D000963 ORTHO05D005131 3.6e-48 195.3 113 90.3
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 2.3e-47 192.6 103 92.2
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 2.6e-46 189.1 99 94.9
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 9.7e-46 187.2 97 96.9
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 9.7e-46 187.2 95 97.9
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 2.8e-45 185.7 99 98.0
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.8e-44 183.0 97 94.8
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.1e-44 181.8 126 77.0
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 4.1e-44 181.8 130 75.4
SHI42531 Sapria himalayana HOM05D000963 ORTHO05D005131 2.0e-43 179.5 103 89.3
SHI47131 Sapria himalayana HOM05D000963 ORTHO05D005131 3.4e-43 178.7 102 90.2
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.0e-42 174.9 98 89.8
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.2e-40 170.2 98 87.8
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 4.7e-40 168.3 103 86.4
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 6.1e-40 167.9 82 97.6
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 8.8e-39 164.1 97 83.5
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 3.3e-38 162.2 139 64.0
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 3.3e-38 162.2 113 77.9
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 5.7e-38 161.4 98 81.6
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 9.7e-38 160.6 88 88.6
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 1.1e-36 157.1 98 83.7
Gohir.A01G056250 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.0e-34 150.6 98 78.6
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 8.5e-34 147.5 86 88.4
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 5.5e-33 144.8 91 84.6
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 9.4e-33 144.1 73 98.6
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 9.4e-33 144.1 78 89.7
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 4.7e-32 141.7 81 88.9
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 6.1e-32 141.4 86 83.7
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.0e-31 140.6 122 63.9
Hma1.2p1_0045F.1_g026530 Hydrangea macrophylla HOM05D000963 ORTHO05D005131 2.6e-30 136.0 84 83.3
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 9.7e-30 134.0 78 88.5
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 9.7e-30 134.0 73 91.8
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 2.8e-29 132.5 103 72.8
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 3.7e-29 132.1 90 77.8
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 1.4e-28 130.2 67 92.5
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 1.2e-27 127.1 76 85.5
Sc14g0005060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.0e-27 126.3 73 89.0
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 2.9e-26 122.5 61 95.1
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 1.1e-25 120.6 98 69.4
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.1e-25 120.6 98 70.4
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 1.2e-24 117.1 79 78.5
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.7e-24 115.9 82 68.3
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 3.6e-24 115.5 82 68.3
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 1.8e-23 113.2 66 84.8
Cpa.g.sc86.15 Carica papaya HOM05D000963 ORTHO05D005131 3.0e-23 112.5 78 74.4
Gohir.D09G105350 Gossypium hirsutum HOM05D000963 ORTHO05D005131 8.8e-23 110.9 68 80.9
Gorai.005G078000 Gossypium raimondii HOM05D000963 ORTHO05D005131 3.4e-22 109.0 79 73.4
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 1.3e-21 107.1 64 84.4
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.7e-21 106.7 79 70.9
EL10Ac7g17438 Beta vulgaris HOM05D000963 ORTHO05D005131 1.1e-20 104.0 56 89.3
LjContig00319g0011411 Lotus japonicus HOM05D000963 ORTHO05D005131 3.1e-20 102.4 50 98.0
Dinv44812 Davidia involucrata HOM05D000086 ORTHO05D000431 7.0e-20 101.3 54 88.9
Nitab4.5_0000017g0110 Nicotiana tabacum HOM05D000963 ORTHO05D005131 9.1e-20 100.9 56 89.3
Nitab4.5_0006211g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 9.1e-20 100.9 54 90.7
Sopen11g020200 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-19 100.5 60 81.7
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 1.3e-18 97.1 48 95.8
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 2.5e-17 92.8 138 48.6
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 2.8e-16 89.4 47 91.5
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 2.8e-16 89.4 47 91.5
VMungo1024G0002 Vigna mungo HOM05D000963 ORTHO05D005131 6.1e-16 88.2 68 67.6
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.4e-15 87.0 83 57.8
SEGI_13287 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 4.0e-15 85.5 56 76.8
CDE02G2642 Ceratophyllum demersum HOM05D000963 ORTHO05D005131 5.2e-15 85.1 46 91.3
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 8.9e-15 84.3 59 78.0
Potri.007G062061 Populus trichocarpa HOM05D010604 ORTHO05D012476 8.9e-15 84.3 117 50.4
Medtr7g093213 Medicago truncatula HOM05D000963 ORTHO05D005131 1.2e-14 84.0 41 97.6
Nitab4.5_0008665g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.2e-14 84.0 48 83.3
Glyma.05G084600 Glycine max HOM05D000963 ORTHO05D005131 1.5e-14 83.6 48 79.2
Nitab4.5_0000729g0060 Nicotiana tabacum HOM05D000963 ORTHO05D005131 2.0e-14 83.2 57 70.2
VMungo0464G1437 Vigna mungo HOM05D000963 ORTHO05D005131 3.4e-14 82.4 47 85.1
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 4.4e-14 82.0 45 88.9
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 4.4e-14 82.0 45 88.9
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 4.4e-14 82.0 45 88.9
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 4.4e-14 82.0 45 88.9
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 4.4e-14 82.0 45 88.9
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 4.4e-14 82.0 45 88.9
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.5e-14 81.3 83 54.2
SEGI_10061 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 7.5e-14 81.3 54 74.1
arahy.Tifrunner.gnm1.ann1.KZ3I51 Arachis hypogaea HOM05D010604 ORTHO05D012476 3.7e-13 79.0 148 43.2
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.9e-13 78.6 49 85.7
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-12 77.4 39 92.3
Sc25g0002260 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.4e-12 76.3 41 90.2
Manes.02G203601 Manihot esculenta HOM05D000963 ORTHO05D005131 3.1e-12 75.9 50 74.0
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 4.1e-12 75.5 42 83.3
ECA234G4679 Erigeron canadensis HOM05D000476 ORTHO05D004793 5.4e-12 75.1 37 94.6
SHI36889 Sapria himalayana HOM05D000963 ORTHO05D005131 3.5e-11 72.4 37 94.6
Oeu048363.1 Olea europaea HOM05D000963 ORTHO05D018542 1.3e-10 70.5 122 41.8
Oeu014166.1 Olea europaea HOM05D000963 ORTHO05D005131 1.7e-10 70.1 45 77.8
VMungo0329G0006 Vigna mungo HOM05D010604 ORTHO05D012476 2.3e-10 69.7 141 41.8
Oeu012823.1 Olea europaea HOM05D000963 ORTHO05D005131 6.6e-10 68.2 36 88.9
arahy.Tifrunner.gnm1.ann1.05XESX Arachis hypogaea HOM05D010604 ORTHO05D012476 3.3e-09 65.9 48 70.8
arahy.Tifrunner.gnm1.ann1.0LX666 Arachis hypogaea HOM05D010604 ORTHO05D012476 3.3e-09 65.9 48 70.8
Cfa010543 Carpinus fangiana HOM05D000963 ORTHO05D005131 4.3e-09 65.5 36 88.9
CsaV3_UNG209450 Cucumis sativus L. HOM05D010604 ORTHO05D012476 2.1e-08 63.2 48 68.8
Lsat_1_v5_gn_4_50261 Lactuca sativa HOM05D004291 ORTHO05D005620 2.1e-08 63.2 48 68.8
Lsat_1_v5_gn_5_152921 Lactuca sativa HOM05D010604 ORTHO05D012476 2.1e-08 63.2 48 68.8
RhsimMtG0000800 Rhododendron simsii HOM05D010604 ORTHO05D012476 2.1e-08 63.2 48 68.8
vmacro21330 Vaccinium macrocarpon HOM05D000963 ORTHO05D014445 2.8e-08 62.8 49 71.4
PGSC0003DMG400003919 Solanum tuberosum HOM05D000963 ORTHO05D005131 8.0e-08 61.2 42 64.3
Oeu043433.1 Olea europaea HOM05D000963 ORTHO05D005131 1.8e-07 60.1 40 70.0
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 4.0e-07 58.9 40 67.5
Sopen09g020260 Solanum pennellii HOM05D010604 ORTHO05D012476 5.2e-07 58.5 49 61.2
SGA_v2.0_scaffold43G16403 Striga asiatica HOM05D000457 ORTHO05D000560 2.0e-06 56.6 32 87.5
Medtr8g040260 Medicago truncatula HOM05D000963 ORTHO05D005131 2.6e-06 56.2 27 96.3


User provided reference genes

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