Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 0.0e+00 1591.2 803 100.0
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 5.5e-278 961.1 809 64.5
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.2e-264 916.8 854 62.2
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 3.2e-262 908.7 806 61.9
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 9.4e-262 907.1 799 62.2
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 3.5e-248 862.1 607 75.8
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 5.4e-225 785.0 805 54.5
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 7.8e-224 781.2 803 55.0
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 3.6e-213 745.7 802 51.4
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 1.4e-212 743.8 788 53.3
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 5.8e-211 738.4 822 51.2
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 1.1e-201 707.6 802 50.5
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.9e-201 706.8 792 51.0
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 4.1e-201 705.7 792 50.8
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 9.2e-201 704.5 814 49.4
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 6.0e-200 701.8 736 52.6
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 6.0e-200 701.8 807 50.3
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 1.5e-198 697.2 799 50.4
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.5e-198 697.2 793 50.2
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 1.5e-198 697.2 793 50.2
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 2.8e-197 693.0 793 50.2
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 4.7e-197 692.2 795 49.6
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 8.1e-197 691.4 795 49.9
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 8.4e-194 681.4 788 49.6
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 1.6e-192 677.2 806 47.6
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 3.9e-191 672.5 801 47.4
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 4.8e-189 665.6 796 49.1
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 1.4e-188 664.1 796 47.5
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 1.5e-187 660.6 800 48.4
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 1.7e-186 657.1 779 47.9
vmacro07877 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 3.2e-185 652.9 420 82.6
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 4.2e-185 652.5 805 48.0
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 9.3e-185 651.4 789 47.5
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 1.0e-183 647.9 805 47.6
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 1.8e-183 647.1 805 47.6
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 9.6e-182 641.3 808 44.8
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 1.1e-180 637.9 810 45.6
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 1.1e-180 637.9 806 46.5
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 3.1e-180 636.3 800 45.9
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 3.1e-180 636.3 800 45.8
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 6.9e-180 635.2 807 45.2
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 1.2e-179 634.4 804 45.9
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 2.6e-179 633.3 807 46.1
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 2.9e-178 629.8 809 45.5
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 7.1e-177 625.2 797 45.2
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 1.2e-176 624.4 800 45.1
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 1.6e-176 624.0 809 46.2
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 6.0e-176 622.1 801 44.9
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 3.0e-175 619.8 798 44.6
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 1.3e-173 614.4 801 46.6
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 4.5e-171 605.9 792 44.9
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 4.5e-171 605.9 817 43.6
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 7.9e-168 595.1 791 43.2
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 5.7e-166 589.0 745 45.4
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 9.0e-164 581.6 794 42.8
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 1.3e-162 577.8 816 42.5
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 3.8e-162 576.2 809 43.3
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 9.3e-161 571.6 806 42.9
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 2.1e-160 570.5 802 41.5
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 2.1e-160 570.5 801 42.4
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 2.7e-160 570.1 816 42.2
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 3.6e-160 569.7 704 47.0
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 6.1e-160 568.9 792 41.5
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 1.3e-159 567.8 774 43.5
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 5.1e-159 565.8 803 41.5
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 8.7e-159 565.1 801 42.2
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 1.1e-158 564.7 826 42.3
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 1.9e-158 563.9 803 43.8
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 1.3e-157 561.2 801 41.4
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 1.3e-157 561.2 801 41.4
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 6.3e-157 558.9 799 41.3
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 1.3e-154 551.2 801 40.9
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 1.7e-154 550.8 803 41.6
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 3.2e-153 546.6 799 40.6
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 7.2e-153 545.4 862 40.7
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 7.2e-153 545.4 800 43.4
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 6.1e-152 542.3 684 46.6
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 1.8e-151 540.8 625 51.0
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 1.0e-146 525.0 788 41.2
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 3.3e-142 510.0 818 40.8
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 3.3e-142 510.0 594 50.2
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 1.3e-138 498.0 798 37.7
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 5.0e-130 469.5 528 48.7
Rhsim03G0014800 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.3e-127 460.7 502 55.4
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 8.3e-125 452.2 812 36.8
ClCG04G000850 Citrullus lanatus HOM05D005711 ORTHO05D007125 6.1e-120 436.0 725 38.6
FvH4_7g07942 Fragaria vesca HOM05D005711 ORTHO05D007125 1.4e-116 424.9 534 47.2
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 5.8e-102 376.3 324 66.4
Dinv01671 Davidia involucrata HOM05D005711 ORTHO05D007125 1.3e-90 338.6 292 63.7
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 9.6e-81 305.8 409 44.5
Thecc.05G160900 Theobroma cacao HOM05D005711 ORTHO05D007125 6.0e-75 286.6 409 43.8
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 1.7e-74 285.0 543 34.6
AUR62024409 Chenopodium quinoa HOM05D005711 ORTHO05D007125 5.6e-73 280.0 377 46.4
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 1.6e-72 278.5 815 29.6
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 1.1e-68 265.8 814 28.6
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 2.4e-55 221.5 350 39.1
Lj2A380T68 Lonicera japonica HOM05D005711 ORTHO05D007125 4.3e-49 200.7 187 57.2
Hma1.2p1_0247F.1_g101860 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 3.2e-44 184.5 173 57.2
Cpa.g.sc92.20 Carica papaya HOM05D005711 ORTHO05D010193 7.2e-44 183.3 196 52.6
COL.COLO4_28165 Corchorus olitorius HOM05D005711 ORTHO05D007125 6.1e-43 180.3 164 58.5
Nitab4.5_0010669g0020 Nicotiana tabacum HOM05D005711 ORTHO05D007125 3.3e-41 174.5 511 30.1
SEGI_36353 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 9.7e-41 172.9 325 36.3
Rhsim03G0097300 Rhododendron simsii HOM05D005711 ORTHO05D007125 3.1e-39 167.9 180 56.7
Rhsim03G0016400 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.3e-26 125.2 98 72.4
FvH4_7g07943 Fragaria vesca HOM05D005711 ORTHO05D007125 1.1e-23 116.3 129 48.1
FAN06G4049 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.4e-23 115.2 129 47.3
FAN10G0844 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.2e-22 112.8 129 47.3
PGSC0003DMG401011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 1.3e-21 109.4 205 35.1
Hma1.2p1_0247F.1_g101870 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 4.4e-17 94.4 95 57.9
Nitab4.5_0010669g0030 Nicotiana tabacum HOM05D005711 ORTHO05D007125 8.2e-16 90.1 165 38.2
Rhsim03G0016100 Rhododendron simsii HOM05D005711 ORTHO05D007125 9.1e-15 86.7 52 80.8
FAN01G1916 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.5e-12 78.6 72 56.9
FAN26G1840 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.5e-09 69.3 154 31.8
SEGI_21308 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 2.8e-08 65.1 122 35.2
FAN04G1389 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.7e-06 58.5 47 53.2


User provided reference genes

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