Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.1e-120 436.8 240 100.0
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.0e-99 367.1 240 88.8
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 1.5e-61 240.4 196 66.8
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 7.3e-61 238.0 192 68.2
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 8.9e-59 231.1 180 68.3
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 6.6e-54 214.9 188 63.3
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 4.3e-53 212.2 175 64.0
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 1.8e-51 206.8 174 65.5
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 2.4e-51 206.5 180 62.8
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 2.4e-51 206.5 117 88.9
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 6.9e-51 204.9 180 64.4
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 2.6e-50 203.0 122 84.4
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 3.4e-50 202.6 192 58.9
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 5.8e-50 201.8 122 83.6
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 5.8e-50 201.8 192 58.9
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 7.6e-50 201.4 128 81.2
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 1.7e-49 200.3 180 61.7
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 2.9e-49 199.5 123 82.1
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 4.9e-49 198.7 184 59.2
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 6.4e-49 198.4 199 55.8
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 6.4e-49 198.4 172 62.8
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 8.4e-49 198.0 121 82.6
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 8.4e-49 198.0 121 82.6
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 8.4e-49 198.0 121 82.6
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 8.4e-49 198.0 122 81.1
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.1e-48 197.6 179 62.0
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.4e-48 197.2 155 67.7
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 1.9e-48 196.8 182 62.6
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 2.4e-48 196.4 123 82.1
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 3.2e-48 196.1 126 76.2
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 3.2e-48 196.1 120 81.7
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 3.2e-48 196.1 159 64.8
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 4.2e-48 195.7 175 62.3
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 5.4e-48 195.3 111 87.4
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 7.1e-48 194.9 185 61.1
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 2.1e-47 193.4 123 78.9
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 2.7e-47 193.0 108 90.7
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 2.7e-47 193.0 221 54.3
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 3.5e-47 192.6 107 90.7
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 4.6e-47 192.2 219 53.4
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 4.6e-47 192.2 172 61.0
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 6.0e-47 191.8 179 57.0
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 1.0e-46 191.0 179 62.6
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.3e-46 190.7 175 58.3
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 2.3e-46 189.9 173 60.1
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 2.3e-46 189.9 183 57.4
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 2.3e-46 189.9 125 76.8
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 3.0e-46 189.5 178 57.9
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 3.0e-46 189.5 178 57.9
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 3.0e-46 189.5 173 61.3
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 3.0e-46 189.5 174 59.8
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 3.9e-46 189.1 181 58.0
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 3.9e-46 189.1 191 57.1
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 3.9e-46 189.1 178 59.0
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 5.1e-46 188.7 181 59.1
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 6.7e-46 188.3 177 58.2
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 1.5e-45 187.2 179 58.1
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.5e-45 187.2 118 78.8
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 1.9e-45 186.8 104 88.5
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 1.9e-45 186.8 114 81.6
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 1.9e-45 186.8 114 80.7
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 2.5e-45 186.4 121 76.9
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 2.5e-45 186.4 114 80.7
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 2.5e-45 186.4 110 83.6
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 3.3e-45 186.0 114 80.7
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 3.3e-45 186.0 114 80.7
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 3.3e-45 186.0 114 80.7
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 3.3e-45 186.0 114 80.7
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 3.3e-45 186.0 127 77.2
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 3.3e-45 186.0 118 79.7
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 5.6e-45 185.3 122 75.4
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 7.4e-45 184.9 110 82.7
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 7.4e-45 184.9 110 82.7
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 7.4e-45 184.9 117 77.8
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.6e-44 183.7 117 78.6
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 3.7e-44 182.6 118 76.3
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 3.7e-44 182.6 115 80.0
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 3.7e-44 182.6 118 78.8
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 4.8e-44 182.2 109 83.5
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 6.2e-44 181.8 116 78.4
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 8.1e-44 181.4 127 74.8
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 8.1e-44 181.4 116 77.6
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 8.1e-44 181.4 103 87.4
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 1.1e-43 181.0 108 85.2
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 1.1e-43 181.0 109 83.5
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 1.8e-43 180.3 179 58.7
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 2.4e-43 179.9 126 69.8
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 3.1e-43 179.5 116 75.9
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 4.0e-43 179.1 119 75.6
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 5.3e-43 178.7 120 74.2
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 6.9e-43 178.3 117 76.1
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 6.9e-43 178.3 101 89.1
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 1.2e-42 177.6 180 58.3
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 5.8e-42 175.3 117 76.1
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 1.3e-41 174.1 114 75.4
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.7e-41 173.7 110 75.5
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 1.1e-40 171.0 102 81.4
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.4e-40 170.6 110 74.5
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 5.5e-40 168.7 122 71.3
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 1.0e-38 164.5 102 79.4
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 6.7e-38 161.8 102 77.5
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 3.7e-36 156.0 117 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 1.0e-33 147.9 111 64.0
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 4.9e-33 145.6 106 64.2
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 1.1e-32 144.4 88 80.7
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 7.1e-32 141.7 103 66.0
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 1.6e-28 130.6 71 87.3
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 3.7e-28 129.4 120 54.2
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 5.3e-27 125.6 91 70.3
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 9.3e-24 114.8 174 43.1
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 2.4e-19 100.1 93 51.6
vmacro16732 Vaccinium macrocarpon HOM05D004105 ORTHO05D005649 3.1e-19 99.8 62 88.7
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 4.5e-18 95.9 56 83.9
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 8.5e-17 91.7 74 58.1
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.4e-14 84.3 62 71.0
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 6.7e-14 82.0 44 84.1
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 6.7e-14 82.0 60 65.0
Actinidia36826 Actinidia chinensis HOM05D004105 ORTHO05D030859 9.7e-13 78.2 61 70.5
Actinidia08890 Actinidia chinensis HOM05D004105 ORTHO05D005649 1.4e-11 74.3 61 68.9
Rhsim12G0177900 Rhododendron simsii HOM05D004105 ORTHO05D005649 9.1e-11 71.6 60 68.3
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.2e-10 71.2 44 75.0
Lsat_1_v5_gn_1_32701 Lactuca sativa HOM05D004105 ORTHO05D005649 4.2e-08 62.8 61 59.0
AUR62034822 Chenopodium quinoa HOM05D004105 ORTHO05D005649 8.0e-07 58.5 61 54.1
ECA247G3132 Erigeron canadensis HOM05D004105 ORTHO05D005649 1.4e-06 57.8 65 52.3
CSS0005977 Camellia sinensis var. sinensis HOM05D004105 ORTHO05D005649 2.3e-06 57.0 62 51.6
CSS0020466 Camellia sinensis var. sinensis HOM05D004105 ORTHO05D005649 3.0e-06 56.6 60 53.3
Dinv11203 Davidia involucrata HOM05D004105 ORTHO05D005649 3.0e-06 56.6 63 61.9
EL10Ac5g11355 Beta vulgaris HOM05D004105 ORTHO05D005649 5.2e-06 55.8 60 55.0
Lj9C482T3 Lonicera japonica HOM05D004105 ORTHO05D005649 5.2e-06 55.8 59 55.9
AUR62029560 Chenopodium quinoa HOM05D004105 ORTHO05D005649 6.7e-06 55.5 60 53.3
Dinv23184 Davidia involucrata HOM05D004105 ORTHO05D030859 6.7e-06 55.5 60 60.0
BcaC02g10904 Brassica carinata HOM05D006938 ORTHO05D008600 8.8e-06 55.1 48 62.5


User provided reference genes

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