Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 0.0e+00 1132.5 554 100.0
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 4.4e-234 814.7 554 76.9
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 2.2e-225 785.8 554 72.4
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 1.4e-224 783.1 554 72.0
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 3.3e-221 771.9 554 72.4
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 3.6e-220 768.5 701 60.9
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 3.6e-212 741.9 549 67.9
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 3.4e-210 735.3 556 66.0
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 2.4e-208 729.2 559 65.5
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 4.1e-208 728.4 556 66.0
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 2.7e-207 725.7 552 65.0
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 1.0e-206 723.8 552 64.7
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 8.0e-204 714.1 557 65.5
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 8.3e-201 704.1 549 64.1
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 1.6e-199 699.9 545 63.9
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 1.6e-199 699.9 548 64.2
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 3.5e-199 698.7 544 63.8
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 6.0e-199 698.0 552 63.4
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 3.0e-198 695.7 544 63.1
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 6.6e-198 694.5 551 65.3
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 2.5e-197 692.6 545 65.0
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 7.3e-197 691.0 549 63.4
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 1.6e-196 689.9 552 63.8
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.6e-196 688.7 542 64.0
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 3.1e-195 685.6 538 65.4
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 2.6e-194 682.6 545 62.9
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 5.8e-194 681.4 556 62.8
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 9.9e-194 680.6 551 62.3
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 9.9e-194 680.6 555 62.3
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 1.3e-193 680.2 547 62.5
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 2.2e-193 679.5 550 62.4
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 2.2e-193 679.5 550 62.5
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 6.4e-193 677.9 572 61.2
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 8.3e-193 677.6 545 63.5
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 3.2e-192 675.6 427 74.2
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 3.2e-192 675.6 545 61.5
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 1.6e-191 673.3 548 61.5
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 1.6e-191 673.3 546 62.8
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 3.5e-191 672.2 596 59.1
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 1.0e-190 670.6 559 61.9
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 1.0e-190 670.6 545 61.3
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 1.7e-190 669.8 548 61.1
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 3.9e-190 668.7 548 58.4
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 3.9e-190 668.7 526 63.7
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 1.1e-189 667.2 546 59.3
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 1.9e-189 666.4 547 62.0
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 3.3e-189 665.6 546 59.3
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 4.3e-189 665.2 548 60.8
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 7.3e-189 664.5 544 61.6
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 7.3e-189 664.5 549 61.4
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 9.5e-189 664.1 558 60.8
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 1.6e-188 663.3 563 60.0
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 1.1e-187 660.6 541 62.3
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 1.8e-187 659.8 549 59.9
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 1.8e-187 659.8 541 61.0
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 3.1e-187 659.1 543 60.6
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 1.2e-186 657.1 549 61.0
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 2.0e-186 656.4 545 60.9
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 2.6e-186 656.0 517 62.5
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 4.4e-186 655.2 544 57.9
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 7.6e-186 654.4 564 59.8
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 9.9e-186 654.1 401 76.3
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 2.9e-185 652.5 542 60.5
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 6.4e-185 651.4 544 58.6
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 6.4e-185 651.4 543 58.6
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 6.4e-185 651.4 543 58.6
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 1.1e-184 650.6 542 59.6
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 1.4e-184 650.2 546 57.7
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 3.2e-184 649.0 544 58.3
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 4.6e-183 645.2 544 57.7
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 1.0e-182 644.0 546 57.7
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 3.9e-182 642.1 542 60.1
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 3.3e-181 639.0 427 71.0
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 3.6e-180 635.6 568 55.8
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 1.4e-179 633.6 607 55.7
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 5.3e-179 631.7 395 72.9
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 9.0e-179 630.9 569 55.2
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 9.0e-179 630.9 539 61.4
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 4.4e-178 628.6 554 57.8
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.7e-177 626.7 548 60.6
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 7.8e-175 617.8 559 58.7
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 1.3e-174 617.1 550 56.4
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 1.3e-174 617.1 554 58.1
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 4.0e-171 605.5 554 55.6
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 5.3e-171 605.1 543 55.2
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 4.9e-169 598.6 551 55.2
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 4.3e-165 585.5 558 53.4
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 4.0e-163 578.9 471 64.3
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 5.3e-163 578.6 425 63.8
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 6.9e-163 578.2 533 58.5
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 6.4e-161 571.6 624 52.9
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 7.9e-159 564.7 464 59.9
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 7.9e-159 564.7 367 73.0
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 1.5e-154 550.4 337 74.5
Nitab4.5_0002303g0020 Nicotiana tabacum HOM05D004979 ORTHO05D006190 7.6e-154 548.1 548 55.3
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.7e-153 547.0 606 51.7
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 2.2e-153 546.6 542 54.8
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.2e-152 542.7 555 53.5
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 3.7e-148 529.3 309 79.9
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 7.9e-143 511.5 353 69.1
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 3.4e-138 496.1 555 47.0
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 4.5e-138 495.7 290 80.7
Rhsim04G0165200 Rhododendron simsii HOM05D004979 ORTHO05D006190 3.2e-136 489.6 386 69.2
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 9.4e-136 488.0 543 45.7
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 1.8e-134 483.8 448 51.8
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 6.7e-134 481.9 528 50.9
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 1.5e-130 470.7 533 47.7
GSVIVG01002014001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.8e-126 457.2 252 83.3
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 1.1e-123 448.0 349 61.9
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 9.1e-123 444.9 292 71.6
CBR_g16989 Chara braunii HOM05D004979 ORTHO05D006190 5.7e-117 425.6 577 41.8
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 2.4e-115 420.2 228 85.1
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 2.4e-115 420.2 228 85.1
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 2.5e-112 410.2 289 68.2
Sopen04g025050 Solanum pennellii HOM05D004979 ORTHO05D006190 2.5e-112 410.2 230 79.6
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 4.7e-111 406.0 550 44.5
Ca_17455_v3 Cicer arietinum L. HOM05D004979 ORTHO05D006190 8.0e-111 405.2 228 79.8
Cpa.g.sc46.4 Carica papaya HOM05D004979 ORTHO05D006190 1.1e-80 305.1 166 82.5
Actinidia01657 Actinidia chinensis HOM05D004979 ORTHO05D006190 7.3e-72 275.8 368 48.4
Dinv22420 Davidia involucrata HOM05D004979 ORTHO05D006190 5.2e-70 269.6 287 53.0
CAN.G1164.35 Capsicum annuum HOM05D004979 ORTHO05D006190 2.2e-68 264.2 169 72.2
Cre14.g617150 Chlamydomonas reinhardtii HOM05D004979 ORTHO05D006190 8.4e-68 262.3 489 36.0
PRCOL_00000039 Prasinoderma coloniale HOM05D004979 ORTHO05D006190 1.5e-64 251.5 439 36.2
Cfa022844 Carpinus fangiana HOM05D004979 ORTHO05D006190 2.1e-63 247.7 460 33.5
MCO11G558 Micromonas commoda HOM05D004979 ORTHO05D006190 2.0e-61 241.1 420 36.4
HanXRQChr14g0439781 Helianthus annuus HOM05D004979 ORTHO05D006190 4.9e-60 236.5 186 60.2
SHI20228 Sapria himalayana HOM05D004979 ORTHO05D006190 7.6e-53 212.6 267 44.2
GSVIVG01007430001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.2e-42 178.7 232 48.3
GSVIVG01007210001 Vitis vinifera HOM05D004979 ORTHO05D006190 3.5e-42 177.2 231 47.2
Lsat_1_v5_gn_8_74721 Lactuca sativa HOM05D004979 ORTHO05D006190 6.5e-36 156.4 85 76.5
Actinidia27722 Actinidia chinensis HOM05D004979 ORTHO05D006190 3.0e-33 147.5 199 46.7
Cpa.g.sc46.2 Carica papaya HOM05D004979 ORTHO05D006190 1.1e-32 145.6 278 36.3
Lsat_1_v5_gn_8_74741 Lactuca sativa HOM05D004979 ORTHO05D006190 9.0e-30 136.0 113 60.2
QL03p011256 Quercus lobata HOM05D004979 ORTHO05D006190 1.2e-29 135.6 80 82.5
Rhsim05G0125000 Rhododendron simsii HOM05D004979 ORTHO05D006190 8.5e-28 129.4 270 37.4
SHI32754 Sapria himalayana HOM05D001374 ORTHO05D004296 6.7e-25 119.8 119 49.6
MBI07_g39750_MAGBIO Magnolia biondii HOM05D004979 ORTHO05D006190 9.7e-24 115.9 110 53.6
DCAR_032148 Daucus carota HOM05D004979 ORTHO05D006190 3.1e-22 110.9 110 52.7
CDE04G1277 Ceratophyllum demersum HOM05D004979 ORTHO05D006190 1.4e-17 95.5 86 55.8
FAN19G1386 Fragaria x ananassa HOM05D004979 ORTHO05D006190 6.7e-17 93.2 96 50.0
Aqoxy2G02599 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 2.6e-13 81.3 41 75.6
ClCG03G002030 Citrullus lanatus HOM05D004979 ORTHO05D006190 1.0e-12 79.3 190 36.8
Sc05g0003730 Simmondsia chinensis HOM05D004979 ORTHO05D006190 1.5e-08 65.5 80 47.5
GSVIVG01004371001 Vitis vinifera HOM05D004979 ORTHO05D006190 2.6e-08 64.7 66 57.6
CBR_g72775 Chara braunii HOM05D004979 ORTHO05D132771 2.8e-07 61.2 76 39.5
AagrBONN_evm.TU.Sc2ySwM_117.715 Anthoceros agrestis HOM05D004979 ORTHO05D006190 4.1e-06 57.4 87 37.9


User provided reference genes

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