Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22210 Vaccinium macrocarpon HOM05D034690 ORTHO05D020483 2.0e-194 682.2 333 100.0
vmacro15019 Vaccinium macrocarpon HOM05D034690 ORTHO05D020483 3.8e-185 651.4 317 100.0
vmacro15155 Vaccinium macrocarpon HOM05D034690 ORTHO05D020483 6.9e-150 534.3 289 90.0
vmacro08123 Vaccinium macrocarpon HOM05D001965 ORTHO05D002112 5.8e-40 169.1 97 87.6
Rhsim04G0219400 Rhododendron simsii HOM05D001965 ORTHO05D002112 2.4e-38 163.7 97 82.5
Actinidia40249 Actinidia chinensis HOM05D001965 ORTHO05D002112 1.9e-22 110.9 97 62.9
Dinv44401 Davidia involucrata HOM05D001965 ORTHO05D002112 8.7e-20 102.1 98 60.2
Dinv38307 Davidia involucrata HOM05D001965 ORTHO05D002112 7.4e-19 99.0 98 58.2
CSS0042119 Camellia sinensis var. sinensis HOM05D001965 ORTHO05D002112 1.1e-17 95.1 98 56.1
Actinidia00042 Actinidia chinensis HOM05D001965 ORTHO05D002112 1.2e-16 91.7 98 54.1
Hma1.2p1_2865F.1_g329610 Hydrangea macrophylla HOM05D001965 ORTHO05D002112 7.6e-16 89.0 98 53.1
vmacro22212 Vaccinium macrocarpon HOM05D001056 ORTHO05D000902 1.4e-14 84.7 144 38.9
Hma1.2p1_0698F.1_g205350 Hydrangea macrophylla HOM05D001965 ORTHO05D002112 2.5e-14 84.0 98 52.0
GSVIVG01017770001 Vitis vinifera HOM05D001965 ORTHO05D002112 2.5e-14 84.0 100 53.0
CSS0007405 Camellia sinensis var. sinensis HOM05D001965 ORTHO05D002112 2.1e-13 80.9 141 39.7
CSS0031262 Camellia sinensis var. sinensis HOM05D001965 ORTHO05D002112 2.1e-13 80.9 141 39.7
Duzib212G0110 Durio zibethinus HOM05D001965 ORTHO05D020483 2.7e-13 80.5 101 47.5
Rhsim08G0237200 Rhododendron simsii HOM05D001056 ORTHO05D000902 4.6e-13 79.7 144 37.5
CiPaw.01G150700 Carya illinoinensis HOM05D001965 ORTHO05D002112 1.0e-12 78.6 107 42.1
QL06p008270 Quercus lobata HOM05D001965 ORTHO05D002112 1.3e-12 78.2 109 43.1
Manes.15G014400 Manihot esculenta HOM05D001965 ORTHO05D002112 1.8e-12 77.8 109 44.0
Haze_01238 Corylus avellana HOM05D001965 ORTHO05D002112 3.9e-12 76.6 120 39.2
Duzib212G0636 Durio zibethinus HOM05D001965 ORTHO05D002112 3.9e-12 76.6 100 46.0
Potri.008G216600 Populus trichocarpa HOM05D001965 ORTHO05D002112 5.1e-12 76.3 109 43.1
vmacro15020 Vaccinium macrocarpon HOM05D001056 ORTHO05D020483 5.1e-12 76.3 38 89.5
Aqoxy2G01810 Aquilegia oxysepala HOM05D001056 ORTHO05D000902 2.5e-11 73.9 144 34.7
Sed0023895 Sechium edule HOM05D001965 ORTHO05D002112 3.3e-11 73.6 108 40.7
Potri.010G023201 Populus trichocarpa HOM05D001965 ORTHO05D002112 4.3e-11 73.2 109 41.3
CsaV3_3G014420 Cucumis sativus L. HOM05D001965 ORTHO05D002112 1.3e-10 71.6 108 40.7
Atru.chr4.2799 Acer truncatum HOM05D001965 ORTHO05D002112 2.8e-10 70.5 100 47.0
ClCG05G005970 Citrullus lanatus HOM05D001965 ORTHO05D002112 2.8e-10 70.5 99 42.4
Hma1.2p1_0496F.1_g166150 Hydrangea macrophylla HOM05D001056 ORTHO05D000902 4.8e-10 69.7 144 33.3
Gohir.A02G047900 Gossypium hirsutum HOM05D001965 ORTHO05D002112 6.2e-10 69.3 134 37.3
Gohir.D02G053000 Gossypium hirsutum HOM05D001965 ORTHO05D002112 8.2e-10 68.9 100 44.0
Sabra08G0154900 Salix brachista HOM05D001965 ORTHO05D002112 1.1e-09 68.6 109 40.4
TWI73G0495 Tripterygium wilfordii HOM05D001965 ORTHO05D002112 1.1e-09 68.6 92 45.7
Gorai.005G058900 Gossypium raimondii HOM05D001965 ORTHO05D002112 1.4e-09 68.2 134 37.3
Sabra10G0015400 Salix brachista HOM05D001965 ORTHO05D002112 1.8e-09 67.8 105 40.0
COL.COLO4_13902 Corchorus olitorius HOM05D001965 ORTHO05D002112 2.4e-09 67.4 99 43.4
MELO3C006642.2 Cucumis melo HOM05D001965 ORTHO05D002112 2.4e-09 67.4 108 39.8
TWI53G1978 Tripterygium wilfordii HOM05D001965 ORTHO05D002112 2.4e-09 67.4 99 45.5
TAR624G0757 Trochodendron aralioides HOM05D001056 ORTHO05D000902 2.4e-09 67.4 144 32.6
MBI19_g20411_MAGBIO Magnolia biondii HOM05D001056 ORTHO05D000902 4.1e-09 66.6 144 33.3
Sed0011069 Sechium edule HOM05D001965 ORTHO05D002112 5.3e-09 66.2 106 40.6
Thecc.04G280900 Theobroma cacao HOM05D001965 ORTHO05D002112 5.3e-09 66.2 100 42.0
Dinv37876 Davidia involucrata HOM05D001056 ORTHO05D000902 9.0e-09 65.5 144 31.9
TAR626G1277 Trochodendron aralioides HOM05D001056 ORTHO05D000902 9.0e-09 65.5 144 33.3
MD09G1186000 Malus domestica HOM05D001056 ORTHO05D000902 1.2e-08 65.1 144 33.3
Nn8g38724 Nelumbo nucifera HOM05D001056 ORTHO05D000902 1.5e-08 64.7 144 32.6
Aqoxy7G04105 Aquilegia oxysepala HOM05D001056 ORTHO05D000902 2.0e-08 64.3 144 32.6
Duzib052G0562 Durio zibethinus HOM05D001965 ORTHO05D002112 3.4e-08 63.5 100 40.0
TAR383G0287 Trochodendron aralioides HOM05D001056 ORTHO05D000902 3.4e-08 63.5 144 32.6
arahy.Tifrunner.gnm1.ann1.5EJH8A Arachis hypogaea HOM05D001965 ORTHO05D002112 4.5e-08 63.2 90 40.0
arahy.Tifrunner.gnm1.ann1.R7AZQJ Arachis hypogaea HOM05D001965 ORTHO05D002112 4.5e-08 63.2 90 40.0
Ciclev10004186m.g Citrus clementina HOM05D001965 ORTHO05D002112 4.5e-08 63.2 147 34.0
CiPaw.01G220800 Carya illinoinensis HOM05D001056 ORTHO05D000902 5.8e-08 62.8 144 31.9
Nn6g35586 Nelumbo nucifera HOM05D001056 ORTHO05D000902 5.8e-08 62.8 144 31.9
Cc01_g01780 Coffea canephora HOM05D001965 ORTHO05D020483 7.6e-08 62.4 101 39.6
Glyma.16G005900 Glycine max HOM05D001056 ORTHO05D000902 1.0e-07 62.0 144 31.9
Prupe.3G043800 Prunus persica HOM05D001056 ORTHO05D000902 1.0e-07 62.0 144 31.9
EL10Ac7g16395 Beta vulgaris HOM05D001056 ORTHO05D000902 1.3e-07 61.6 144 30.6
arahy.Tifrunner.gnm1.ann1.3YA759 Arachis hypogaea HOM05D001056 ORTHO05D000902 1.7e-07 61.2 144 31.2
arahy.Tifrunner.gnm1.ann1.H48ZYL Arachis hypogaea HOM05D001056 ORTHO05D000902 1.7e-07 61.2 144 31.2
Cpa.g.sc16.152 Carica papaya HOM05D001965 ORTHO05D002112 1.7e-07 61.2 182 32.4
Cc01_g01650 Coffea canephora HOM05D001965 ORTHO05D002112 1.7e-07 61.2 97 41.2
AUR62001499 Chenopodium quinoa HOM05D001056 ORTHO05D000902 2.2e-07 60.8 144 30.6
Haze_16011 Corylus avellana HOM05D001056 ORTHO05D000902 2.2e-07 60.8 144 31.2
Phvul.010G132800 Phaseolus vulgaris HOM05D001056 ORTHO05D000902 2.9e-07 60.5 144 31.2
VMungo0331G0933 Vigna mungo HOM05D001056 ORTHO05D000902 2.9e-07 60.5 144 31.2
Actinidia26034 Actinidia chinensis HOM05D001056 ORTHO05D000902 5.0e-07 59.7 144 29.9
Glyma.07G036500 Glycine max HOM05D001056 ORTHO05D000902 5.0e-07 59.7 144 31.2
Glyma.07G249800 Glycine max HOM05D001965 ORTHO05D002112 5.0e-07 59.7 99 39.4
Phvul.003G103001 Phaseolus vulgaris HOM05D001965 ORTHO05D002112 6.5e-07 59.3 99 37.4
TAR365G0296 Trochodendron aralioides HOM05D001965 ORTHO05D002112 6.5e-07 59.3 122 37.7
MBI13_g04191_MAGBIO Magnolia biondii HOM05D001965 ORTHO05D002112 8.4e-07 58.9 99 40.4
GSVIVG01016782001 Vitis vinifera HOM05D001056 ORTHO05D000902 8.4e-07 58.9 145 31.7
Actinidia32176 Actinidia chinensis HOM05D001056 ORTHO05D000902 1.1e-06 58.5 161 31.7
CSS0017839 Camellia sinensis var. sinensis HOM05D001056 ORTHO05D000902 1.1e-06 58.5 37 70.3
CDE05G0748 Ceratophyllum demersum HOM05D001056 ORTHO05D000902 1.1e-06 58.5 144 29.9
Cc06_g11870 Coffea canephora HOM05D001056 ORTHO05D000902 1.1e-06 58.5 144 31.2
Gohir.A06G075200 Gossypium hirsutum HOM05D001056 ORTHO05D000902 1.1e-06 58.5 147 31.3
AUR62009871 Chenopodium quinoa HOM05D001056 ORTHO05D000902 1.4e-06 58.2 144 29.9
Ca_05013_v3 Cicer arietinum L. HOM05D001056 ORTHO05D000902 1.4e-06 58.2 144 30.6
Ca_30522_v3 Cicer arietinum L. HOM05D001056 ORTHO05D000902 1.4e-06 58.2 144 30.6
Glyma.17G024600 Glycine max HOM05D001965 ORTHO05D002112 1.4e-06 58.2 99 37.4
Medtr4g119390 Medicago truncatula HOM05D001965 ORTHO05D002112 1.4e-06 58.2 91 40.7
Ciclev10000065m.g Citrus clementina HOM05D001965 ORTHO05D002112 1.9e-06 57.8 99 36.4
Lj4g0021619 Lotus japonicus HOM05D001965 ORTHO05D002112 1.9e-06 57.8 88 39.8
Oeu006150.1 Olea europaea HOM05D001056 ORTHO05D000902 1.9e-06 57.8 57 52.6
Gohir.D06G074000 Gossypium hirsutum HOM05D001056 ORTHO05D000902 2.5e-06 57.4 147 31.3
Gorai.010G086500 Gossypium raimondii HOM05D001056 ORTHO05D000902 2.5e-06 57.4 147 31.3
CDE11G0473 Ceratophyllum demersum HOM05D001056 ORTHO05D000902 3.2e-06 57.0 144 30.6
Oeu051318.1 Olea europaea HOM05D001056 ORTHO05D000902 3.2e-06 57.0 57 52.6
Manes.03G037900 Manihot esculenta HOM05D001056 ORTHO05D000902 4.2e-06 56.6 144 29.9
Ah.08g216660 Amaranthus hybridus HOM05D001056 ORTHO05D000902 5.5e-06 56.2 144 30.6
Glyma.13G108200 Glycine max HOM05D001056 ORTHO05D000902 5.5e-06 56.2 147 30.6
Glyma.17G051200 Glycine max HOM05D001056 ORTHO05D000902 5.5e-06 56.2 147 30.6
Psat4g027800 Pisum sativum HOM05D001965 ORTHO05D002112 5.5e-06 56.2 91 38.5
Potri.001G170800 Populus trichocarpa HOM05D001056 ORTHO05D000902 5.5e-06 56.2 144 30.6
Sabra06G0113300 Salix brachista HOM05D001056 ORTHO05D000902 5.5e-06 56.2 146 30.8
Sabra06G0114600 Salix brachista HOM05D001056 ORTHO05D000902 5.5e-06 56.2 146 30.8
CiPaw.04G146600 Carya illinoinensis HOM05D001056 ORTHO05D000902 7.2e-06 55.8 146 30.8
QL05p008514 Quercus lobata HOM05D001056 ORTHO05D000902 7.2e-06 55.8 144 29.9
Atru.chr7.1662 Acer truncatum HOM05D001056 ORTHO05D000902 9.3e-06 55.5 146 30.8
FAN26G0691 Fragaria x ananassa HOM05D001056 ORTHO05D000902 9.3e-06 55.5 146 32.2
FAN26G3340 Fragaria x ananassa HOM05D001056 ORTHO05D000902 9.3e-06 55.5 146 32.2
Manes.16G097800 Manihot esculenta HOM05D001056 ORTHO05D000902 9.3e-06 55.5 146 30.8
QL02p061102 Quercus lobata HOM05D001056 ORTHO05D000902 9.3e-06 55.5 146 30.8
RcHm_v2.0_Chr2g0094271 Rosa chinensis HOM05D001056 ORTHO05D000902 9.3e-06 55.5 146 32.2
RcHm_v2.0_Chr2g0144791 Rosa chinensis HOM05D001056 ORTHO05D000902 9.3e-06 55.5 144 29.2
Solyc01g067560.3 Solanum lycopersicum HOM05D001965 ORTHO05D002112 9.3e-06 55.5 90 40.0
Sopen01g029510 Solanum pennellii HOM05D001965 ORTHO05D002112 9.3e-06 55.5 90 40.0


User provided reference genes

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