Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22183 Vaccinium macrocarpon HOM05D004822 ORTHO05D005632 8.3e-39 163.3 87 100.0
Dinv29145 Davidia involucrata HOM05D004822 ORTHO05D005632 2.2e-23 112.1 69 79.7
vmacro06525 Vaccinium macrocarpon HOM05D004822 ORTHO05D005632 2.2e-23 112.1 69 78.3
Actinidia08752 Actinidia chinensis HOM05D004822 ORTHO05D005632 2.9e-23 111.7 69 76.8
SalBow4G2092 Salvia bowleyana HOM05D004822 ORTHO05D005632 2.9e-23 111.7 69 78.3
SalBow4G3298 Salvia bowleyana HOM05D004822 ORTHO05D005632 2.9e-23 111.7 69 78.3
Migut.F00086 Erythranthe guttata HOM05D004822 ORTHO05D005632 4.9e-23 110.9 68 77.9
COL.COLO4_15238 Corchorus olitorius HOM05D004822 ORTHO05D005632 6.4e-23 110.5 69 75.4
Cc02_g00190 Coffea canephora HOM05D004822 ORTHO05D005632 8.3e-23 110.2 69 76.8
Rhsim03G0222800 Rhododendron simsii HOM05D004822 ORTHO05D005632 8.3e-23 110.2 69 76.8
Manes.09G127500 Manihot esculenta HOM05D004822 ORTHO05D005632 1.4e-22 109.4 69 75.4
CiPaw.06G034300 Carya illinoinensis HOM05D004822 ORTHO05D005632 1.9e-22 109.0 69 75.4
TWI12G0583 Tripterygium wilfordii HOM05D004822 ORTHO05D005632 1.9e-22 109.0 68 77.9
Cfa016047 Carpinus fangiana HOM05D004822 ORTHO05D005632 2.4e-22 108.6 69 73.9
Haze_00399 Corylus avellana HOM05D004822 ORTHO05D005632 3.2e-22 108.2 69 73.9
Gohir.A08G221666 Gossypium hirsutum HOM05D004822 ORTHO05D005632 3.2e-22 108.2 69 73.9
Gohir.D08G241600 Gossypium hirsutum HOM05D004822 ORTHO05D005632 3.2e-22 108.2 69 73.9
Gorai.004G256900 Gossypium raimondii HOM05D004822 ORTHO05D005632 3.2e-22 108.2 69 73.9
TWI18G0151 Tripterygium wilfordii HOM05D004822 ORTHO05D005632 5.4e-22 107.5 69 75.4
Duzib106G0609 Durio zibethinus HOM05D004822 ORTHO05D005632 7.1e-22 107.1 69 73.9
Thecc.05G215800 Theobroma cacao HOM05D004822 ORTHO05D005632 7.1e-22 107.1 69 71.0
ECA232G1387 Erigeron canadensis HOM05D004822 ORTHO05D005632 9.2e-22 106.7 69 72.5
Hma1.2p1_0649F.1_g195250 Hydrangea macrophylla HOM05D004822 ORTHO05D005632 9.2e-22 106.7 69 73.9
Nitab4.5_0004530g0010 Nicotiana tabacum HOM05D004822 ORTHO05D005632 9.2e-22 106.7 68 75.0
Sabra13G0073000 Salix brachista HOM05D004822 ORTHO05D005632 1.2e-21 106.3 78 70.5
Atru.chr12.1891 Acer truncatum HOM05D004822 ORTHO05D005632 1.6e-21 105.9 69 72.5
MD01G1237100 Malus domestica HOM05D004822 ORTHO05D005632 1.6e-21 105.9 69 73.9
MD07G1309700 Malus domestica HOM05D004822 ORTHO05D005632 1.6e-21 105.9 69 73.9
Nitab4.5_0000021g0700 Nicotiana tabacum HOM05D004822 ORTHO05D005632 1.6e-21 105.9 68 75.0
arahy.Tifrunner.gnm1.ann1.TC8PXF Arachis hypogaea HOM05D004822 ORTHO05D005632 2.1e-21 105.5 69 73.9
arahy.Tifrunner.gnm1.ann1.UL380H Arachis hypogaea HOM05D004822 ORTHO05D005632 2.1e-21 105.5 69 73.9
Lalb_Chr01g0000881 Lupinus albus HOM05D004822 ORTHO05D005632 2.1e-21 105.5 69 75.4
HanXRQChr08g0231351 Helianthus annuus HOM05D004822 ORTHO05D005632 2.7e-21 105.1 69 72.5
Solyc03g097140.3 Solanum lycopersicum HOM05D004822 ORTHO05D005632 2.7e-21 105.1 68 73.5
Sopen03g027880 Solanum pennellii HOM05D004822 ORTHO05D005632 2.7e-21 105.1 68 73.5
FvH4_7g34080 Fragaria vesca HOM05D004822 ORTHO05D005632 3.5e-21 104.8 69 75.4
HanXRQChr16g0512131 Helianthus annuus HOM05D004822 ORTHO05D005632 3.5e-21 104.8 69 71.0
RcHm_v2.0_Chr1g0384361 Rosa chinensis HOM05D004822 ORTHO05D005632 3.5e-21 104.8 69 75.4
Ciclev10021817m.g Citrus clementina HOM05D004822 ORTHO05D005632 4.6e-21 104.4 69 71.0
Glyma.01G233200 Glycine max HOM05D004822 ORTHO05D005632 4.6e-21 104.4 69 71.0
Potri.013G079900 Populus trichocarpa HOM05D004822 ORTHO05D005632 4.6e-21 104.4 68 75.0
CSS0024551 Camellia sinensis var. sinensis HOM05D004822 ORTHO05D005632 6.0e-21 104.0 68 76.5
CSS0024699 Camellia sinensis var. sinensis HOM05D004822 ORTHO05D005632 6.0e-21 104.0 68 76.5
Glyma.11G009600 Glycine max HOM05D004822 ORTHO05D005632 6.0e-21 104.0 69 69.6
PGSC0003DMG400003148 Solanum tuberosum HOM05D004822 ORTHO05D005632 6.0e-21 104.0 68 73.5
TAR362G0773 Trochodendron aralioides HOM05D004822 ORTHO05D005632 6.0e-21 104.0 68 72.1
Prupe.2G327400 Prunus persica HOM05D004822 ORTHO05D005632 1.0e-20 103.2 69 72.5
QL09p023219 Quercus lobata HOM05D004822 ORTHO05D005632 1.0e-20 103.2 69 71.0
Dinv17249 Davidia involucrata HOM05D004822 ORTHO05D005632 1.3e-20 102.8 68 75.0
Lalb_Chr19g0140001 Lupinus albus HOM05D004822 ORTHO05D005632 1.3e-20 102.8 69 72.5
Oeu007515.1 Olea europaea HOM05D004822 ORTHO05D005632 1.3e-20 102.8 69 71.0
Phvul.002G040700 Phaseolus vulgaris HOM05D004822 ORTHO05D005632 1.3e-20 102.8 69 69.6
CANSAT56G1711 Cannabis sativa HOM05D004822 ORTHO05D005632 2.3e-20 102.1 69 69.6
CiPaw.05G216100 Carya illinoinensis HOM05D004822 ORTHO05D005632 2.3e-20 102.1 69 69.6
Lj3A886T38 Lonicera japonica HOM05D004822 ORTHO05D005632 2.3e-20 102.1 69 69.6
PGR042G2086 Punica granatum HOM05D004822 ORTHO05D005632 2.3e-20 102.1 69 71.0
THA.LOC104827203 Tarenaya hassleriana HOM05D004822 ORTHO05D005632 2.3e-20 102.1 69 68.1
Peaxi162Scf00516g00674 Petunia axillaris HOM05D004822 ORTHO05D005632 3.9e-20 101.3 78 66.7
THA.LOC104820895 Tarenaya hassleriana HOM05D004822 ORTHO05D005632 3.9e-20 101.3 78 65.4
BcaB01g04968 Brassica carinata HOM05D004822 ORTHO05D005632 5.1e-20 100.9 78 65.4
BcaB01g05242 Brassica carinata HOM05D004822 ORTHO05D005632 5.1e-20 100.9 78 65.4
A03p07960 Brassica napus HOM05D004822 ORTHO05D005632 5.1e-20 100.9 78 65.4
C03p09170 Brassica napus HOM05D004822 ORTHO05D005632 5.1e-20 100.9 78 65.4
BolC3t13414H Brassica oleracea HOM05D004822 ORTHO05D005632 5.1e-20 100.9 78 65.4
BraA03t10121Z Brassica rapa HOM05D004822 ORTHO05D005632 5.1e-20 100.9 78 65.4
DCAR_020414 Daucus carota HOM05D004822 ORTHO05D005632 6.6e-20 100.5 69 66.7
GSVIVG01024375001 Vitis vinifera HOM05D004822 ORTHO05D005632 6.6e-20 100.5 68 70.6
arahy.Tifrunner.gnm1.ann1.IXL9K3 Arachis hypogaea HOM05D004822 ORTHO05D005632 8.6e-20 100.1 69 71.0
Duzib177G1199 Durio zibethinus HOM05D004822 ORTHO05D005632 8.6e-20 100.1 69 68.1
arahy.Tifrunner.gnm1.ann1.YEB8JM Arachis hypogaea HOM05D004822 ORTHO05D005632 1.1e-19 99.8 69 69.6
CAN.G1131.24 Capsicum annuum HOM05D004822 ORTHO05D005632 1.1e-19 99.8 71 67.6
TAR374G1016 Trochodendron aralioides HOM05D004822 ORTHO05D005632 1.1e-19 99.8 69 68.1
Duzib128G1067 Durio zibethinus HOM05D004822 ORTHO05D005632 1.5e-19 99.4 68 69.1
Gohir.D13G099300 Gossypium hirsutum HOM05D004822 ORTHO05D005632 1.5e-19 99.4 69 71.0
Gorai.013G103600 Gossypium raimondii HOM05D004822 ORTHO05D005632 1.5e-19 99.4 69 71.0
unitig_747.g21929 Utricularia gibba HOM05D004822 ORTHO05D005632 1.5e-19 99.4 69 69.6
Aqoxy3G02240 Aquilegia oxysepala HOM05D004822 ORTHO05D005632 1.9e-19 99.0 67 76.1
EL10Ac3g05059 Beta vulgaris HOM05D004822 ORTHO05D005632 1.9e-19 99.0 77 63.6
DCAR_010536 Daucus carota HOM05D004822 ORTHO05D005632 1.9e-19 99.0 68 69.1
Nitab4.5_0000150g0020 Nicotiana tabacum HOM05D004822 ORTHO05D005632 1.9e-19 99.0 69 65.2
MELO3C021888.2 Cucumis melo HOM05D004822 ORTHO05D005632 2.5e-19 98.6 68 73.5
CsaV3_2G036410 Cucumis sativus L. HOM05D004822 ORTHO05D005632 2.5e-19 98.6 68 73.5
Eucgr.H04873 Eucalyptus grandis HOM05D004822 ORTHO05D005632 2.5e-19 98.6 78 66.7
Sp6g27330 Schrenkiella parvula HOM05D004822 ORTHO05D005632 2.5e-19 98.6 78 64.1
MSTRG.26924 Avicennia marina HOM05D004822 ORTHO05D005632 3.3e-19 98.2 68 66.2
ClCG09G016920 Citrullus lanatus HOM05D004822 ORTHO05D005632 3.3e-19 98.2 67 74.6
Aa31LG11G12780 Aethionema arabicum HOM05D004822 ORTHO05D005632 5.6e-19 97.4 78 64.1
Carub.0006s1502 Capsella rubella HOM05D004822 ORTHO05D005632 5.6e-19 97.4 78 62.8
Medtr5g007400 Medicago truncatula HOM05D004822 ORTHO05D005632 7.3e-19 97.1 69 68.1
Psat2g189120 Pisum sativum HOM05D004822 ORTHO05D005632 7.3e-19 97.1 69 68.1
HPP92_014856 Vanilla planifolia HOM05D004822 ORTHO05D005632 9.5e-19 96.7 67 70.1
AL6G27820 Arabidopsis lyrata HOM05D004822 ORTHO05D005632 1.2e-18 96.3 78 61.5
CARHR196360 Cardamine hirsuta HOM05D004822 ORTHO05D005632 1.2e-18 96.3 78 61.5
CDE06G0869 Ceratophyllum demersum HOM05D000380 ORTHO05D000561 1.2e-18 96.3 67 68.7
Sp3g02040 Schrenkiella parvula HOM05D004822 ORTHO05D005632 1.2e-18 96.3 78 64.1
Thhalv10014541m.g Eutrema salsugineum HOM05D004822 ORTHO05D005632 1.6e-18 95.9 69 65.2
Potri.019G050700 Populus trichocarpa HOM05D004822 ORTHO05D005632 1.6e-18 95.9 78 64.1
SHI29591 Sapria himalayana HOM05D004822 ORTHO05D005632 2.1e-18 95.5 71 67.6
Sed0007243 Sechium edule HOM05D004822 ORTHO05D005632 2.1e-18 95.5 76 67.1
BcaC04g18846 Brassica carinata HOM05D004822 ORTHO05D005632 3.6e-18 94.7 81 58.0
AT5G16800 Arabidopsis thaliana HOM05D004822 ORTHO05D005632 4.7e-18 94.4 78 60.3
A10p22430 Brassica napus HOM05D004822 ORTHO05D005632 4.7e-18 94.4 69 65.2
BraA10t44302Z Brassica rapa HOM05D004822 ORTHO05D005632 4.7e-18 94.4 69 65.2
LjContig00222g0020254 Lotus japonicus HOM05D004822 ORTHO05D005632 4.7e-18 94.4 78 62.8
Sc25g0001230 Simmondsia chinensis HOM05D004822 ORTHO05D005632 4.7e-18 94.4 79 63.3
TPR.G37975 Trifolium pratense HOM05D004822 ORTHO05D005632 4.7e-18 94.4 69 68.1
Zm00001eb251310 Zea mays HOM05D004822 ORTHO05D005632 4.7e-18 94.4 67 67.2
BcaC04g18845 Brassica carinata HOM05D004822 ORTHO05D005632 8.1e-18 93.6 69 63.8
C09p60280 Brassica napus HOM05D004822 ORTHO05D005632 8.1e-18 93.6 69 63.8
BolC9t58861H Brassica oleracea HOM05D004822 ORTHO05D005632 8.1e-18 93.6 69 63.8
Hund09803 Selenicereus undatus HOM05D004822 ORTHO05D005632 8.1e-18 93.6 77 59.7
SEGI_16512 Sequoiadendron giganteum HOM05D004822 ORTHO05D005632 8.1e-18 93.6 67 65.7
CSS0013609 Camellia sinensis var. sinensis HOM05D004822 ORTHO05D005632 1.1e-17 93.2 69 63.8
CSS0045344 Camellia sinensis var. sinensis HOM05D004822 ORTHO05D005632 1.1e-17 93.2 69 63.8
Nn1g00175 Nelumbo nucifera HOM05D004822 ORTHO05D005632 1.1e-17 93.2 67 67.2
Lsat_1_v5_gn_9_47720 Lactuca sativa HOM05D004822 ORTHO05D005632 1.4e-17 92.8 68 63.2
Lj3g0022054 Lotus japonicus HOM05D004822 ORTHO05D005632 3.1e-17 91.7 69 63.8
ATR0829G204 Amborella trichopoda HOM05D004822 ORTHO05D005632 4.0e-17 91.3 68 66.2
AT3G02980 Arabidopsis thaliana HOM05D004822 ORTHO05D005632 4.0e-17 91.3 78 61.5
Carub.0003s0211 Capsella rubella HOM05D004822 ORTHO05D005632 4.0e-17 91.3 78 61.5
AUR62028196 Chenopodium quinoa HOM05D004822 ORTHO05D005632 6.8e-17 90.5 77 59.7
AUR62002079 Chenopodium quinoa HOM05D004822 ORTHO05D005632 8.9e-17 90.1 77 58.4
Mapoly0133s0015 Marchantia polymorpha HOM05D004822 ORTHO05D005632 8.9e-17 90.1 76 57.9
Ah.04g156230 Amaranthus hybridus HOM05D004822 ORTHO05D005632 1.2e-16 89.7 69 59.4
Eucgr.K00079 Eucalyptus grandis HOM05D004822 ORTHO05D005632 2.0e-16 89.0 69 63.8
Nitab4.5_0001108g0050 Nicotiana tabacum HOM05D004822 ORTHO05D005632 2.6e-16 88.6 97 49.5
BolC5t35048H Brassica oleracea HOM05D004822 ORTHO05D005632 3.4e-16 88.2 69 60.9
A05p44150 Brassica napus HOM05D004822 ORTHO05D005632 1.7e-15 85.9 78 57.7
BraSC90t46695Z Brassica rapa HOM05D004822 ORTHO05D005632 1.7e-15 85.9 78 57.7
Peaxi162Scf00133g00611 Petunia axillaris HOM05D004822 ORTHO05D005632 2.2e-15 85.5 99 45.5
Pp3c21_19030 Physcomitrium patens HOM05D004822 ORTHO05D005632 1.9e-14 82.4 64 57.8
SMO146G0253 Selaginella moellendorffii HOM05D004822 ORTHO05D005632 5.4e-14 80.9 66 59.1
Aa31LG5G13470 Aethionema arabicum HOM05D004822 ORTHO05D005632 9.2e-14 80.1 69 53.6
Pp3c19_16350 Physcomitrium patens HOM05D004822 ORTHO05D005632 1.1e-11 73.2 64 53.1
arahy.Tifrunner.gnm1.ann1.KDM1H7 Arachis hypogaea HOM05D004822 ORTHO05D005632 6.2e-10 67.4 61 54.1
arahy.Tifrunner.gnm1.ann1.U456D3 Arachis hypogaea HOM05D004822 ORTHO05D005632 8.1e-10 67.0 61 52.5
PGR142G2504 Punica granatum HOM05D004822 ORTHO05D005632 1.8e-09 65.9 69 49.3
Rhsim09G0213500 Rhododendron simsii HOM05D004822 ORTHO05D005632 2.2e-07 58.9 34 82.4
SGA_v2.0_scaffold44G16902 Striga asiatica HOM05D004822 ORTHO05D005632 2.4e-06 55.5 34 73.5


User provided reference genes

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